{"id":"https://openalex.org/W1549142908","doi":"https://doi.org/10.1007/978-3-642-14571-1_8","title":"An Information Theoretic Approach to Reverse Engineering of Regulatory Gene Networks from Time\u2013Course Data","display_name":"An Information Theoretic Approach to Reverse Engineering of Regulatory Gene Networks from Time\u2013Course Data","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W1549142908","doi":"https://doi.org/10.1007/978-3-642-14571-1_8","mag":"1549142908"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-14571-1_8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-14571-1_8","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009018743","display_name":"Pietro Zoppoli","orcid":"https://orcid.org/0000-0002-7860-9655"},"institutions":[{"id":"https://openalex.org/I16337185","display_name":"University of Sannio","ror":"https://ror.org/04vc81p87","country_code":"IT","type":"education","lineage":["https://openalex.org/I16337185"]},{"id":"https://openalex.org/I4210115745","display_name":"Biogem","ror":"https://ror.org/01ymr5447","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I2801626668","https://openalex.org/I4210115745"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Pietro Zoppoli","raw_affiliation_strings":["Bioinformatics Lab, IRGS Istituto di Ricerche Genetiche G. Salvatore, BioGeM s.c.a r.l., Ariano Irpino, (AV), Italy","Department of Biological and Evironmental Sciences, University of Sannio, Benevento, Italy","Department of Biological and Evironmental Sciences, University of Sannio, Benevento, Italy and Bioinformatics Lab, IRGS Istituto di Ricerche Genetiche G. Salvatore, BioGeM s.c.a r.l., Ariano Irpin ...#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Lab, IRGS Istituto di Ricerche Genetiche G. Salvatore, BioGeM s.c.a r.l., Ariano Irpino, (AV), Italy","institution_ids":["https://openalex.org/I4210115745"]},{"raw_affiliation_string":"Department of Biological and Evironmental Sciences, University of Sannio, Benevento, Italy","institution_ids":["https://openalex.org/I16337185"]},{"raw_affiliation_string":"Department of Biological and Evironmental Sciences, University of Sannio, Benevento, Italy and Bioinformatics Lab, IRGS Istituto di Ricerche Genetiche G. Salvatore, BioGeM s.c.a r.l., Ariano Irpin ...#TAB#","institution_ids":["https://openalex.org/I16337185"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087559200","display_name":"Sandro Morganella","orcid":"https://orcid.org/0000-0003-4050-0985"},"institutions":[{"id":"https://openalex.org/I16337185","display_name":"University of Sannio","ror":"https://ror.org/04vc81p87","country_code":"IT","type":"education","lineage":["https://openalex.org/I16337185"]},{"id":"https://openalex.org/I4210115745","display_name":"Biogem","ror":"https://ror.org/01ymr5447","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I2801626668","https://openalex.org/I4210115745"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Sandro Morganella","raw_affiliation_strings":["Bioinformatics Lab, IRGS Istituto di Ricerche Genetiche G. Salvatore, BioGeM s.c.a r.l., Ariano Irpino, (AV), Italy","Department of Biological and Evironmental Sciences, University of Sannio, Benevento, Italy","Department of Biological and Evironmental Sciences, University of Sannio, Benevento, Italy and Bioinformatics Lab, IRGS Istituto di Ricerche Genetiche G. Salvatore, BioGeM s.c.a r.l., Ariano Irpin ...#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Lab, IRGS Istituto di Ricerche Genetiche G. Salvatore, BioGeM s.c.a r.l., Ariano Irpino, (AV), Italy","institution_ids":["https://openalex.org/I4210115745"]},{"raw_affiliation_string":"Department of Biological and Evironmental Sciences, University of Sannio, Benevento, Italy","institution_ids":["https://openalex.org/I16337185"]},{"raw_affiliation_string":"Department of Biological and Evironmental Sciences, University of Sannio, Benevento, Italy and Bioinformatics Lab, IRGS Istituto di Ricerche Genetiche G. Salvatore, BioGeM s.c.a r.l., Ariano Irpin ...#TAB#","institution_ids":["https://openalex.org/I16337185"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085527072","display_name":"Michele Ceccarelli","orcid":"https://orcid.org/0000-0002-4702-6617"},"institutions":[{"id":"https://openalex.org/I16337185","display_name":"University of Sannio","ror":"https://ror.org/04vc81p87","country_code":"IT","type":"education","lineage":["https://openalex.org/I16337185"]},{"id":"https://openalex.org/I4210115745","display_name":"Biogem","ror":"https://ror.org/01ymr5447","country_code":"IT","type":"nonprofit","lineage":["https://openalex.org/I2801626668","https://openalex.org/I4210115745"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Michele Ceccarelli","raw_affiliation_strings":["Bioinformatics Lab, IRGS Istituto di Ricerche Genetiche G. Salvatore, BioGeM s.c.a r.l., Ariano Irpino, (AV), Italy","Department of Biological and Evironmental Sciences, University of Sannio, Benevento, Italy","Department of Biological and Evironmental Sciences, University of Sannio, Benevento, Italy and Bioinformatics Lab, IRGS Istituto di Ricerche Genetiche G. Salvatore, BioGeM s.c.a r.l., Ariano Irpin ...#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Lab, IRGS Istituto di Ricerche Genetiche G. Salvatore, BioGeM s.c.a r.l., Ariano Irpino, (AV), Italy","institution_ids":["https://openalex.org/I4210115745"]},{"raw_affiliation_string":"Department of Biological and Evironmental Sciences, University of Sannio, Benevento, Italy","institution_ids":["https://openalex.org/I16337185"]},{"raw_affiliation_string":"Department of Biological and Evironmental Sciences, University of Sannio, Benevento, Italy and Bioinformatics Lab, IRGS Istituto di Ricerche Genetiche G. Salvatore, BioGeM s.c.a r.l., Ariano Irpin ...#TAB#","institution_ids":["https://openalex.org/I16337185"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.04875549,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"97","last_page":"111"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7256355285644531},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.6873281598091125},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.6363193392753601},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5418072938919067},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.5225641131401062},{"id":"https://openalex.org/keywords/mutual-information","display_name":"Mutual information","score":0.5070164203643799},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.4652598202228546},{"id":"https://openalex.org/keywords/markov-chain","display_name":"Markov chain","score":0.44367551803588867},{"id":"https://openalex.org/keywords/markov-process","display_name":"Markov process","score":0.43116921186447144},{"id":"https://openalex.org/keywords/reverse-engineering","display_name":"Reverse engineering","score":0.4278129041194916},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4277043640613556},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.29411736130714417},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2904239892959595},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.2826598882675171},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.21318212151527405},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1516084372997284},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13092035055160522},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09658259153366089}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7256355285644531},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.6873281598091125},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.6363193392753601},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5418072938919067},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.5225641131401062},{"id":"https://openalex.org/C152139883","wikidata":"https://www.wikidata.org/wiki/Q252973","display_name":"Mutual information","level":2,"score":0.5070164203643799},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.4652598202228546},{"id":"https://openalex.org/C98763669","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov chain","level":2,"score":0.44367551803588867},{"id":"https://openalex.org/C159886148","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov process","level":2,"score":0.43116921186447144},{"id":"https://openalex.org/C207850805","wikidata":"https://www.wikidata.org/wiki/Q269608","display_name":"Reverse engineering","level":2,"score":0.4278129041194916},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4277043640613556},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.29411736130714417},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2904239892959595},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.2826598882675171},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.21318212151527405},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1516084372997284},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13092035055160522},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09658259153366089},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-14571-1_8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-14571-1_8","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W105785986","https://openalex.org/W1520053542","https://openalex.org/W1573602524","https://openalex.org/W1587352276","https://openalex.org/W1933643226","https://openalex.org/W1987293552","https://openalex.org/W1996264210","https://openalex.org/W1997449813","https://openalex.org/W2007471837","https://openalex.org/W2020410648","https://openalex.org/W2027570783","https://openalex.org/W2029485495","https://openalex.org/W2040575507","https://openalex.org/W2044525257","https://openalex.org/W2065515536","https://openalex.org/W2065599173","https://openalex.org/W2078149659","https://openalex.org/W2078237481","https://openalex.org/W2080828514","https://openalex.org/W2085826258","https://openalex.org/W2099111195","https://openalex.org/W2103453943","https://openalex.org/W2103691700","https://openalex.org/W2104854813","https://openalex.org/W2113654344","https://openalex.org/W2115108153","https://openalex.org/W2117994680","https://openalex.org/W2119436275","https://openalex.org/W2121695897","https://openalex.org/W2122342005","https://openalex.org/W2136988691","https://openalex.org/W2137143372","https://openalex.org/W2137989059","https://openalex.org/W2146621718","https://openalex.org/W2148563299","https://openalex.org/W2159482845","https://openalex.org/W2160091849","https://openalex.org/W2160533336","https://openalex.org/W2161409973","https://openalex.org/W2161511352","https://openalex.org/W2163296115","https://openalex.org/W2611370172","https://openalex.org/W2947626232","https://openalex.org/W4242577767","https://openalex.org/W4245169559","https://openalex.org/W4294216483","https://openalex.org/W4300995828"],"related_works":["https://openalex.org/W2363831530","https://openalex.org/W2363845219","https://openalex.org/W2381057835","https://openalex.org/W1789649838","https://openalex.org/W2466816617","https://openalex.org/W2051831113","https://openalex.org/W1984362519","https://openalex.org/W2106927126","https://openalex.org/W1982897783","https://openalex.org/W2593123794"],"abstract_inverted_index":null,"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
