{"id":"https://openalex.org/W1595896123","doi":"https://doi.org/10.1007/978-3-642-13119-6_35","title":"Accelerating Dock6\u2019s Amber Scoring with Graphic Processing Unit","display_name":"Accelerating Dock6\u2019s Amber Scoring with Graphic Processing Unit","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W1595896123","doi":"https://doi.org/10.1007/978-3-642-13119-6_35","mag":"1595896123"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-13119-6_35","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-13119-6_35","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7120663","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018705589","display_name":"Hailong Yang","orcid":"https://orcid.org/0000-0003-1101-7927"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hailong Yang","raw_affiliation_strings":["Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, 100191, Beijing, China","Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, 100191, Beijing, China","institution_ids":["https://openalex.org/I82880672"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080740834","display_name":"Bo Li","orcid":"https://orcid.org/0000-0002-9121-8253"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bo Li","raw_affiliation_strings":["Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, 100191, Beijing, China","Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, 100191, Beijing, China","institution_ids":["https://openalex.org/I82880672"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100670532","display_name":"Yongjian Wang","orcid":"https://orcid.org/0000-0001-9356-3782"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yongjian Wang","raw_affiliation_strings":["Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, 100191, Beijing, China","Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, 100191, Beijing, China","institution_ids":["https://openalex.org/I82880672"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074183877","display_name":"Zhongzhi Luan","orcid":"https://orcid.org/0000-0002-7186-0556"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhongzhi Luan","raw_affiliation_strings":["Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, 100191, Beijing, China","Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, 100191, Beijing, China","institution_ids":["https://openalex.org/I82880672"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079362609","display_name":"Depei Qian","orcid":"https://orcid.org/0000-0002-5382-1473"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Depei Qian","raw_affiliation_strings":["Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, 100191, Beijing, China","Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, 100191, Beijing, China","institution_ids":["https://openalex.org/I82880672"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049624839","display_name":"Tianshu Chu","orcid":"https://orcid.org/0000-0002-2711-8098"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tianshu Chu","raw_affiliation_strings":["Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, 100191, Beijing, China","Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, 100191, Beijing, China","institution_ids":["https://openalex.org/I82880672"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Sino-German Joint Software Institute, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.12730142,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"404","last_page":"415"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9905999898910522,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9905999898910522,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9677000045776367,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12002","display_name":"Computability, Logic, AI Algorithms","score":0.9383999705314636,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/porting","display_name":"Porting","score":0.7927218079566956},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.786151647567749},{"id":"https://openalex.org/keywords/cuda","display_name":"CUDA","score":0.6751171350479126},{"id":"https://openalex.org/keywords/speedup","display_name":"Speedup","score":0.6582218408584595},{"id":"https://openalex.org/keywords/general-purpose-computing-on-graphics-processing-units","display_name":"General-purpose computing on graphics processing units","score":0.48301801085472107},{"id":"https://openalex.org/keywords/leverage","display_name":"Leverage (statistics)","score":0.45512884855270386},{"id":"https://openalex.org/keywords/thread","display_name":"Thread (computing)","score":0.43379008769989014},{"id":"https://openalex.org/keywords/virtual-screening","display_name":"Virtual screening","score":0.4301375448703766},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.41160666942596436},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.3095948100090027},{"id":"https://openalex.org/keywords/graphics","display_name":"Graphics","score":0.20026057958602905},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20007523894309998},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.15702545642852783},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.1411026120185852},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.11777716875076294}],"concepts":[{"id":"https://openalex.org/C106251023","wikidata":"https://www.wikidata.org/wiki/Q851989","display_name":"Porting","level":3,"score":0.7927218079566956},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.786151647567749},{"id":"https://openalex.org/C2778119891","wikidata":"https://www.wikidata.org/wiki/Q477690","display_name":"CUDA","level":2,"score":0.6751171350479126},{"id":"https://openalex.org/C68339613","wikidata":"https://www.wikidata.org/wiki/Q1549489","display_name":"Speedup","level":2,"score":0.6582218408584595},{"id":"https://openalex.org/C50630238","wikidata":"https://www.wikidata.org/wiki/Q971505","display_name":"General-purpose computing on graphics processing units","level":3,"score":0.48301801085472107},{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.45512884855270386},{"id":"https://openalex.org/C138101251","wikidata":"https://www.wikidata.org/wiki/Q213092","display_name":"Thread (computing)","level":2,"score":0.43379008769989014},{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.4301375448703766},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.41160666942596436},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.3095948100090027},{"id":"https://openalex.org/C21442007","wikidata":"https://www.wikidata.org/wiki/Q1027879","display_name":"Graphics","level":2,"score":0.20026057958602905},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20007523894309998},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.15702545642852783},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.1411026120185852},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.11777716875076294},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-3-642-13119-6_35","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-13119-6_35","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:pubmedcentral.nih.gov:7120663","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7120663","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms and Architectures for Parallel Processing","raw_type":"Text"},{"id":"pmh:oai:repository.hkust.edu.hk:1783.1-75031","is_oa":false,"landing_page_url":"http://repository.hkust.edu.hk/ir/Record/1783.1-75031","pdf_url":null,"source":{"id":"https://openalex.org/S4306401796","display_name":"Rare & Special e-Zone (The Hong Kong University of Science and Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I200769079","host_organization_name":"Hong Kong University of Science and Technology","host_organization_lineage":["https://openalex.org/I200769079"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Conference paper"},{"id":"pmh:oai:repository.ust.hk:1783.1-75031","is_oa":false,"landing_page_url":"http://www.scopus.com/record/display.url?eid=2-s2.0-78951470079&origin=inward","pdf_url":null,"source":{"id":"https://openalex.org/S4306401796","display_name":"Rare & Special e-Zone (The Hong Kong University of Science and Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I200769079","host_organization_name":"Hong Kong University of Science and Technology","host_organization_lineage":["https://openalex.org/I200769079"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Conference paper"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:7120663","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7120663","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms and Architectures for Parallel Processing","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.8700000047683716,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":13,"referenced_works":["https://openalex.org/W2047838177","https://openalex.org/W2067455153","https://openalex.org/W2100690831","https://openalex.org/W2124007994","https://openalex.org/W2127766448","https://openalex.org/W2132540527","https://openalex.org/W2147993766","https://openalex.org/W2150056503","https://openalex.org/W2170396259","https://openalex.org/W2270278874","https://openalex.org/W3144805821","https://openalex.org/W4238826819","https://openalex.org/W4240741347"],"related_works":["https://openalex.org/W2621501241","https://openalex.org/W2208757713","https://openalex.org/W3177128669","https://openalex.org/W2991848348","https://openalex.org/W1963859303","https://openalex.org/W2364044215","https://openalex.org/W2389600408","https://openalex.org/W240129890","https://openalex.org/W3048701459","https://openalex.org/W2149078538"],"abstract_inverted_index":null,"counts_by_year":[{"year":2017,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
