{"id":"https://openalex.org/W1524015530","doi":"https://doi.org/10.1007/978-3-642-04747-3_35","title":"Gene Functional Annotation with Dynamic Hierarchical Classification Guided by Orthologs","display_name":"Gene Functional Annotation with Dynamic Hierarchical Classification Guided by Orthologs","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1524015530","doi":"https://doi.org/10.1007/978-3-642-04747-3_35","mag":"1524015530"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-04747-3_35","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-04747-3_35","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103280533","display_name":"Kazuhiro Seki","orcid":"https://orcid.org/0000-0002-1967-4334"},"institutions":[{"id":"https://openalex.org/I65837984","display_name":"Kobe University","ror":"https://ror.org/03tgsfw79","country_code":"JP","type":"education","lineage":["https://openalex.org/I65837984"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Kazuhiro Seki","raw_affiliation_strings":["Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan","Kobe University,Kobe,JAPAN,657-8501"],"affiliations":[{"raw_affiliation_string":"Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan","institution_ids":["https://openalex.org/I65837984"]},{"raw_affiliation_string":"Kobe University,Kobe,JAPAN,657-8501","institution_ids":["https://openalex.org/I65837984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042510713","display_name":"Yoshihiro Kino","orcid":"https://orcid.org/0000-0003-0862-8065"},"institutions":[{"id":"https://openalex.org/I65837984","display_name":"Kobe University","ror":"https://ror.org/03tgsfw79","country_code":"JP","type":"education","lineage":["https://openalex.org/I65837984"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yoshihiro Kino","raw_affiliation_strings":["Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan","Kobe University,Kobe,JAPAN,657-8501"],"affiliations":[{"raw_affiliation_string":"Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan","institution_ids":["https://openalex.org/I65837984"]},{"raw_affiliation_string":"Kobe University,Kobe,JAPAN,657-8501","institution_ids":["https://openalex.org/I65837984"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023847482","display_name":"Kuniaki Uehara","orcid":"https://orcid.org/0000-0002-7160-3752"},"institutions":[{"id":"https://openalex.org/I65837984","display_name":"Kobe University","ror":"https://ror.org/03tgsfw79","country_code":"JP","type":"education","lineage":["https://openalex.org/I65837984"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kuniaki Uehara","raw_affiliation_strings":["Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan","Kobe University,Kobe,JAPAN,657-8501"],"affiliations":[{"raw_affiliation_string":"Kobe University, 1-1 Rokkodai, Nada, Kobe, 657-8501, Japan","institution_ids":["https://openalex.org/I65837984"]},{"raw_affiliation_string":"Kobe University,Kobe,JAPAN,657-8501","institution_ids":["https://openalex.org/I65837984"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5103280533"],"corresponding_institution_ids":["https://openalex.org/I65837984"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.929,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.75305841,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"425","last_page":"432"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8235853910446167},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.7138350009918213},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7125221490859985},{"id":"https://openalex.org/keywords/complement","display_name":"Complement (music)","score":0.619759202003479},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.6081664562225342},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5566241145133972},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5070545673370361},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.46374401450157166},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3536372184753418},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2716459035873413},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.0728258490562439}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8235853910446167},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.7138350009918213},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7125221490859985},{"id":"https://openalex.org/C112313634","wikidata":"https://www.wikidata.org/wiki/Q7886648","display_name":"Complement (music)","level":5,"score":0.619759202003479},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.6081664562225342},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5566241145133972},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5070545673370361},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.46374401450157166},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3536372184753418},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2716459035873413},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0728258490562439},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C188082640","wikidata":"https://www.wikidata.org/wiki/Q1780899","display_name":"Complementation","level":4,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-642-04747-3_35","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-04747-3_35","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.508.6122","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.508.6122","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.ai.cs.kobe-u.ac.jp/~kseki/myarticles/seki2009ds.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.4300000071525574}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":9,"referenced_works":["https://openalex.org/W1523949738","https://openalex.org/W1764948990","https://openalex.org/W2015137204","https://openalex.org/W2056119436","https://openalex.org/W2096082161","https://openalex.org/W2114370860","https://openalex.org/W2123273303","https://openalex.org/W2148130205","https://openalex.org/W2166711445"],"related_works":["https://openalex.org/W17155033","https://openalex.org/W3207760230","https://openalex.org/W1496222301","https://openalex.org/W4312814274","https://openalex.org/W1590307681","https://openalex.org/W2536018345","https://openalex.org/W4285370786","https://openalex.org/W2296488620","https://openalex.org/W2349392800","https://openalex.org/W2794019507"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
