{"id":"https://openalex.org/W1870329955","doi":"https://doi.org/10.1007/978-3-642-04744-2_9","title":"Aligning Two Genomic Sequences That Contain Duplications","display_name":"Aligning Two Genomic Sequences That Contain Duplications","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1870329955","doi":"https://doi.org/10.1007/978-3-642-04744-2_9","mag":"1870329955"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-04744-2_9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-04744-2_9","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018863394","display_name":"Minmei Hou","orcid":null},"institutions":[{"id":"https://openalex.org/I102502594","display_name":"Northern Illinois University","ror":"https://ror.org/012wxa772","country_code":"US","type":"education","lineage":["https://openalex.org/I102502594"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Minmei Hou","raw_affiliation_strings":["Dept. of Computer Science, Northern Illinois University, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, Northern Illinois University, USA","institution_ids":["https://openalex.org/I102502594"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112165368","display_name":"Cathy Riemer","orcid":null},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cathy Riemer","raw_affiliation_strings":["Center for Comparative Genomics and Bioinformatics, Penn State University, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Comparative Genomics and Bioinformatics, Penn State University, USA","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023910624","display_name":"Piotr Berman","orcid":null},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Piotr Berman","raw_affiliation_strings":["Dept. of Computer Science and Engineering, Penn State University, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science and Engineering, Penn State University, USA","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014328256","display_name":"Ross C. Hardison","orcid":"https://orcid.org/0000-0003-4084-7516"},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ross C. Hardison","raw_affiliation_strings":["Center for Comparative Genomics and Bioinformatics, Penn State University, USA","Dept. of Biochemistry and Molecular Biology, Penn State University, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Comparative Genomics and Bioinformatics, Penn State University, USA","institution_ids":["https://openalex.org/I130769515"]},{"raw_affiliation_string":"Dept. of Biochemistry and Molecular Biology, Penn State University, USA","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5071092709","display_name":"Webb Miller","orcid":null},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Webb Miller","raw_affiliation_strings":["Center for Comparative Genomics and Bioinformatics, Penn State University, USA","Dept. of Biology, Penn State University, USA","Dept. of Computer Science and Engineering, Penn State University, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Comparative Genomics and Bioinformatics, Penn State University, USA","institution_ids":["https://openalex.org/I130769515"]},{"raw_affiliation_string":"Dept. of Biology, Penn State University, USA","institution_ids":["https://openalex.org/I130769515"]},{"raw_affiliation_string":"Dept. of Computer Science and Engineering, Penn State University, USA","institution_ids":["https://openalex.org/I130769515"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.9305,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.7644742,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"98","last_page":"110"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9878000020980835,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9847999811172485,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene-duplication","display_name":"Gene duplication","score":0.7767765522003174},{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.6279302835464478},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.6103419065475464},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.552695095539093},{"id":"https://openalex.org/keywords/genetic-algorithm","display_name":"Genetic algorithm","score":0.5407012701034546},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.5157666206359863},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4310899078845978},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.42438241839408875},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.3664947748184204},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3381023406982422},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3289806842803955},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2971894145011902},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24974164366722107}],"concepts":[{"id":"https://openalex.org/C7602840","wikidata":"https://www.wikidata.org/wiki/Q746284","display_name":"Gene duplication","level":3,"score":0.7767765522003174},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.6279302835464478},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.6103419065475464},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.552695095539093},{"id":"https://openalex.org/C2776838516","wikidata":"https://www.wikidata.org/wiki/Q187787","display_name":"Genetic algorithm","level":2,"score":0.5407012701034546},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.5157666206359863},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4310899078845978},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.42438241839408875},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3664947748184204},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3381023406982422},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3289806842803955},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2971894145011902},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24974164366722107},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-04744-2_9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-04744-2_9","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land","score":0.6499999761581421}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W319819633","https://openalex.org/W1488164488","https://openalex.org/W1836271588","https://openalex.org/W1963740133","https://openalex.org/W1990453950","https://openalex.org/W2008856488","https://openalex.org/W2057998009","https://openalex.org/W2081254453","https://openalex.org/W2095598699","https://openalex.org/W2095824228","https://openalex.org/W2107537542","https://openalex.org/W2112132489","https://openalex.org/W2124786890","https://openalex.org/W2128016314","https://openalex.org/W2145100181","https://openalex.org/W2155237411","https://openalex.org/W2159266221","https://openalex.org/W2164296734","https://openalex.org/W2165558283","https://openalex.org/W2167188257","https://openalex.org/W2171547914","https://openalex.org/W2254220978","https://openalex.org/W2402203281","https://openalex.org/W2488204691","https://openalex.org/W3199943451","https://openalex.org/W4234277332"],"related_works":["https://openalex.org/W4388014327","https://openalex.org/W2115382138","https://openalex.org/W1883409887","https://openalex.org/W2367076742","https://openalex.org/W2349742942","https://openalex.org/W4328050637","https://openalex.org/W2776829638","https://openalex.org/W2064495883","https://openalex.org/W2122664375","https://openalex.org/W2106870860"],"abstract_inverted_index":null,"counts_by_year":[{"year":2012,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
