{"id":"https://openalex.org/W2770263303","doi":"https://doi.org/10.1007/978-3-642-04241-6_12","title":"Mimosa: Mixture Model of Co-expression to Detect Modulators of Regulatory Interaction","display_name":"Mimosa: Mixture Model of Co-expression to Detect Modulators of Regulatory Interaction","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W2770263303","doi":"https://doi.org/10.1007/978-3-642-04241-6_12","mag":"2770263303"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-04241-6_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-04241-6_12","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074187496","display_name":"Matthew E.B. Hansen","orcid":"https://orcid.org/0000-0002-1183-4137"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Hansen","raw_affiliation_strings":["Penn Center for Bioinformatics Department of Genetics, University of Pennsylvania, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Penn Center for Bioinformatics Department of Genetics, University of Pennsylvania, USA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018169292","display_name":"Logan J. Everett","orcid":"https://orcid.org/0000-0002-9713-6099"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Logan Everett","raw_affiliation_strings":["Penn Center for Bioinformatics Department of Genetics, University of Pennsylvania, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Penn Center for Bioinformatics Department of Genetics, University of Pennsylvania, USA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061589516","display_name":"Larry N. Singh","orcid":"https://orcid.org/0000-0002-2478-5864"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Larry Singh","raw_affiliation_strings":["Penn Center for Bioinformatics Department of Genetics, University of Pennsylvania, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Penn Center for Bioinformatics Department of Genetics, University of Pennsylvania, USA","institution_ids":["https://openalex.org/I79576946"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011962029","display_name":"Sridhar Hannenhalli","orcid":"https://orcid.org/0000-0001-9603-7569"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sridhar Hannenhalli","raw_affiliation_strings":["Penn Center for Bioinformatics Department of Genetics, University of Pennsylvania, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Penn Center for Bioinformatics Department of Genetics, University of Pennsylvania, USA","institution_ids":["https://openalex.org/I79576946"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I79576946"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"133","last_page":"144"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6354685425758362},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6281889081001282},{"id":"https://openalex.org/keywords/expression","display_name":"Expression (computer science)","score":0.6229656934738159},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.5918992161750793},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.5483289361000061},{"id":"https://openalex.org/keywords/regulatory-sequence","display_name":"Regulatory sequence","score":0.48367246985435486},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.4705415368080139},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4400452971458435},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.37584248185157776},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3646891713142395}],"concepts":[{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6354685425758362},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6281889081001282},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.6229656934738159},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.5918992161750793},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.5483289361000061},{"id":"https://openalex.org/C21592294","wikidata":"https://www.wikidata.org/wiki/Q3238407","display_name":"Regulatory sequence","level":4,"score":0.48367246985435486},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.4705415368080139},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4400452971458435},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.37584248185157776},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3646891713142395},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-04241-6_12","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-04241-6_12","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1922163249","https://openalex.org/W1965828942","https://openalex.org/W1968754277","https://openalex.org/W1999084705","https://openalex.org/W2012661761","https://openalex.org/W2022215206","https://openalex.org/W2028517598","https://openalex.org/W2030865745","https://openalex.org/W2037580712","https://openalex.org/W2059699217","https://openalex.org/W2080498142","https://openalex.org/W2097090208","https://openalex.org/W2098412979","https://openalex.org/W2108331169","https://openalex.org/W2109902820","https://openalex.org/W2123733630","https://openalex.org/W2135805255","https://openalex.org/W2139329624","https://openalex.org/W2139845570","https://openalex.org/W2161409973","https://openalex.org/W2162142896","https://openalex.org/W2163296115","https://openalex.org/W2168546553","https://openalex.org/W3099289621"],"related_works":["https://openalex.org/W2613929436","https://openalex.org/W2347793859","https://openalex.org/W3151254369","https://openalex.org/W46113340","https://openalex.org/W2016183850","https://openalex.org/W2129550547","https://openalex.org/W2175857012","https://openalex.org/W2093869340","https://openalex.org/W2056355047","https://openalex.org/W4234163953"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
