{"id":"https://openalex.org/W1492401641","doi":"https://doi.org/10.1007/978-3-642-04031-3_16","title":"Knowledge-Guided Docking of WW Domain Proteins and Flexible Ligands","display_name":"Knowledge-Guided Docking of WW Domain Proteins and Flexible Ligands","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1492401641","doi":"https://doi.org/10.1007/978-3-642-04031-3_16","mag":"1492401641"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-04031-3_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-04031-3_16","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5052281869","display_name":"Lu Haiyun","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Haiyun Lu","raw_affiliation_strings":["Dept. of Computer Science, School of Computing, National University of Singapore, Singapore, 117590"],"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, School of Computing, National University of Singapore, Singapore, 117590","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100348623","display_name":"Hao Li","orcid":"https://orcid.org/0000-0002-6652-4793"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Hao Li","raw_affiliation_strings":["Dept. of Computer Science, School of Computing, National University of Singapore, Singapore, 117590"],"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, School of Computing, National University of Singapore, Singapore, 117590","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003928200","display_name":"Shamima Banu Bte Sm Rashid","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Shamima Banu Bte Sm Rashid","raw_affiliation_strings":["Dept. of Computer Science, School of Computing, National University of Singapore, Singapore, 117590"],"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, School of Computing, National University of Singapore, Singapore, 117590","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110150995","display_name":"Wee Kheng Leow","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Wee Kheng Leow","raw_affiliation_strings":["Dept. of Computer Science, School of Computing, National University of Singapore, Singapore, 117590"],"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, School of Computing, National University of Singapore, Singapore, 117590","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072699872","display_name":"Yih\u2010Cherng Liou","orcid":"https://orcid.org/0000-0003-0149-6856"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Yih-Cherng Liou","raw_affiliation_strings":["Dept. of Biological Sciences, Faculty of Science, National University of Singapore, Singapore, 117543"],"affiliations":[{"raw_affiliation_string":"Dept. of Biological Sciences, Faculty of Science, National University of Singapore, Singapore, 117543","institution_ids":["https://openalex.org/I165932596"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5052281869"],"corresponding_institution_ids":["https://openalex.org/I165932596"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.929,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.74980268,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"175","last_page":"186"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11041","display_name":"Ubiquitin and proteasome pathways","score":0.9818000197410583,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11041","display_name":"Ubiquitin and proteasome pathways","score":0.9818000197410583,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9803000092506409,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12534","display_name":"Protein Degradation and Inhibitors","score":0.9799000024795532,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.795881450176239},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7755981683731079},{"id":"https://openalex.org/keywords/ww-domain","display_name":"WW domain","score":0.47222331166267395},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4591718018054962},{"id":"https://openalex.org/keywords/protein\u2013ligand-docking","display_name":"Protein\u2013ligand docking","score":0.43575918674468994},{"id":"https://openalex.org/keywords/stereochemistry","display_name":"Stereochemistry","score":0.18596568703651428},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1523338258266449},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.09099522233009338},{"id":"https://openalex.org/keywords/virtual-screening","display_name":"Virtual screening","score":0.066224604845047},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.05548718571662903}],"concepts":[{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.795881450176239},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7755981683731079},{"id":"https://openalex.org/C204491159","wikidata":"https://www.wikidata.org/wiki/Q24726881","display_name":"WW domain","level":3,"score":0.47222331166267395},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4591718018054962},{"id":"https://openalex.org/C77319485","wikidata":"https://www.wikidata.org/wiki/Q7251520","display_name":"Protein\u2013ligand docking","level":4,"score":0.43575918674468994},{"id":"https://openalex.org/C71240020","wikidata":"https://www.wikidata.org/wiki/Q186011","display_name":"Stereochemistry","level":1,"score":0.18596568703651428},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1523338258266449},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.09099522233009338},{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.066224604845047},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.05548718571662903},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C56173144","wikidata":"https://www.wikidata.org/wiki/Q1539893","display_name":"Pharmacophore","level":2,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-642-04031-3_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-04031-3_16","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:scholarbank.nus.edu.sg:10635/43334","is_oa":false,"landing_page_url":"http://scholarbank.nus.edu.sg/handle/10635/43334","pdf_url":null,"source":{"id":"https://openalex.org/S7407052290","display_name":"National University of Singapore","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Scopus","raw_type":"Conference Paper"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.377.3412","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.377.3412","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.comp.nus.edu.sg/~leowwk/papers/prib2009.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W1566965859","https://openalex.org/W1964167423","https://openalex.org/W1979629343","https://openalex.org/W2000383223","https://openalex.org/W2000464453","https://openalex.org/W2011963129","https://openalex.org/W2012825006","https://openalex.org/W2043186621","https://openalex.org/W2050456292","https://openalex.org/W2083753880","https://openalex.org/W2091646933","https://openalex.org/W2091734240","https://openalex.org/W2111387452","https://openalex.org/W2114779636","https://openalex.org/W2118233996","https://openalex.org/W2126265982","https://openalex.org/W2130479394","https://openalex.org/W2133712572","https://openalex.org/W2138227733","https://openalex.org/W2148258346","https://openalex.org/W2153255725","https://openalex.org/W2153731681","https://openalex.org/W2153983456","https://openalex.org/W2158133029","https://openalex.org/W2158534713","https://openalex.org/W2160223767","https://openalex.org/W2163462520","https://openalex.org/W3097169496","https://openalex.org/W4296588184"],"related_works":["https://openalex.org/W1581147483","https://openalex.org/W4310018788","https://openalex.org/W4398796548","https://openalex.org/W2329052364","https://openalex.org/W2162967120","https://openalex.org/W1567411871","https://openalex.org/W2553094381","https://openalex.org/W2072180710","https://openalex.org/W2794807012","https://openalex.org/W2301625241"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
