{"id":"https://openalex.org/W1528457990","doi":"https://doi.org/10.1007/978-3-642-03076-5_14","title":"Speeding Up Local-Search Type Algorithms for Designing DNA Sequences under Thermodynamical Constraints","display_name":"Speeding Up Local-Search Type Algorithms for Designing DNA Sequences under Thermodynamical Constraints","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1528457990","doi":"https://doi.org/10.1007/978-3-642-03076-5_14","mag":"1528457990"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-03076-5_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-03076-5_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025861298","display_name":"Suguru Kawashimo","orcid":null},"institutions":[{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Suguru Kawashimo","raw_affiliation_strings":["Dept. of Computer Science and Communication Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, Fukuoka, 819-0395, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science and Communication Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, Fukuoka, 819-0395, Japan","institution_ids":["https://openalex.org/I135598925"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047448762","display_name":"Yen Kaow Ng","orcid":"https://orcid.org/0000-0003-1556-9438"},"institutions":[{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yen Kaow Ng","raw_affiliation_strings":["Dept. of Computer Science and Communication Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, Fukuoka, 819-0395, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science and Communication Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, Fukuoka, 819-0395, Japan","institution_ids":["https://openalex.org/I135598925"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045038367","display_name":"Hirotaka Ono","orcid":"https://orcid.org/0000-0003-0845-3947"},"institutions":[{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Hirotaka Ono","raw_affiliation_strings":["Dept. of Computer Science and Communication Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, Fukuoka, 819-0395, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science and Communication Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, Fukuoka, 819-0395, Japan","institution_ids":["https://openalex.org/I135598925"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077610103","display_name":"Kunihiko Sadakane","orcid":"https://orcid.org/0000-0002-8212-3682"},"institutions":[{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kunihiko Sadakane","raw_affiliation_strings":["Dept. of Computer Science and Communication Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, Fukuoka, 819-0395, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science and Communication Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, Fukuoka, 819-0395, Japan","institution_ids":["https://openalex.org/I135598925"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5111575379","display_name":"Masafumi Yamashita","orcid":null},"institutions":[{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masafumi Yamashita","raw_affiliation_strings":["Dept. of Computer Science and Communication Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, Fukuoka, 819-0395, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science and Communication Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka, Fukuoka, 819-0395, Japan","institution_ids":["https://openalex.org/I135598925"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.4653,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.65045293,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"168","last_page":"178"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7098166942596436},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.6901383399963379},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.6001085042953491},{"id":"https://openalex.org/keywords/local-search","display_name":"Local search (optimization)","score":0.5978475213050842},{"id":"https://openalex.org/keywords/type","display_name":"Type (biology)","score":0.5646766424179077},{"id":"https://openalex.org/keywords/search-algorithm","display_name":"Search algorithm","score":0.4758439064025879},{"id":"https://openalex.org/keywords/reuse","display_name":"Reuse","score":0.47237280011177063},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.4696238338947296},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3204587996006012},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.20877662301063538}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7098166942596436},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.6901383399963379},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.6001085042953491},{"id":"https://openalex.org/C135320971","wikidata":"https://www.wikidata.org/wiki/Q1868524","display_name":"Local search (optimization)","level":2,"score":0.5978475213050842},{"id":"https://openalex.org/C2777299769","wikidata":"https://www.wikidata.org/wiki/Q3707858","display_name":"Type (biology)","level":2,"score":0.5646766424179077},{"id":"https://openalex.org/C125583679","wikidata":"https://www.wikidata.org/wiki/Q755673","display_name":"Search algorithm","level":2,"score":0.4758439064025879},{"id":"https://openalex.org/C206588197","wikidata":"https://www.wikidata.org/wiki/Q846574","display_name":"Reuse","level":2,"score":0.47237280011177063},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.4696238338947296},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3204587996006012},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.20877662301063538},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-03076-5_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-03076-5_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/7","score":0.8600000143051147,"display_name":"Affordable and clean energy"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W86087590","https://openalex.org/W1004197201","https://openalex.org/W1484564260","https://openalex.org/W1490305626","https://openalex.org/W1534112425","https://openalex.org/W1543796220","https://openalex.org/W1562861155","https://openalex.org/W1567090568","https://openalex.org/W1604750263","https://openalex.org/W1860906034","https://openalex.org/W1968245790","https://openalex.org/W1977312644","https://openalex.org/W2017106829","https://openalex.org/W2018288292","https://openalex.org/W2025763720","https://openalex.org/W2031214412","https://openalex.org/W2043653977","https://openalex.org/W2053776430","https://openalex.org/W2077086564","https://openalex.org/W2122246788","https://openalex.org/W2126244322","https://openalex.org/W2134310806","https://openalex.org/W2135373808"],"related_works":["https://openalex.org/W1521720388","https://openalex.org/W1777480463","https://openalex.org/W2794473043","https://openalex.org/W2077549107","https://openalex.org/W90886653","https://openalex.org/W1586280759","https://openalex.org/W4220945639","https://openalex.org/W4312928368","https://openalex.org/W2364426871","https://openalex.org/W4211243022"],"abstract_inverted_index":null,"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
