{"id":"https://openalex.org/W1756079418","doi":"https://doi.org/10.1007/978-3-642-02481-8_142","title":"GREAT: Gene Regulation EvAluation Tool","display_name":"GREAT: Gene Regulation EvAluation Tool","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1756079418","doi":"https://doi.org/10.1007/978-3-642-02481-8_142","mag":"1756079418"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-02481-8_142","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-02481-8_142","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://hdl.handle.net/10451/14033","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049376787","display_name":"C\u00e1tia Maria dos Santos Machado","orcid":"https://orcid.org/0000-0003-4055-6014"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Catia Machado","raw_affiliation_strings":["Department of Informatics, Faculty of Sciences, University of Lisbon, Edif\u00edcio C6, Piso 3, Campo Grande, 1749-016, Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Faculty of Sciences, University of Lisbon, Edif\u00edcio C6, Piso 3, Campo Grande, 1749-016, Lisbon, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073297912","display_name":"Hugo Bastos","orcid":"https://orcid.org/0000-0002-8072-4070"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Hugo Bastos","raw_affiliation_strings":["Department of Informatics, Faculty of Sciences, University of Lisbon, Edif\u00edcio C6, Piso 3, Campo Grande, 1749-016, Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Faculty of Sciences, University of Lisbon, Edif\u00edcio C6, Piso 3, Campo Grande, 1749-016, Lisbon, Portugal","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014333753","display_name":"Francisco M. Couto","orcid":"https://orcid.org/0000-0003-0627-1496"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Francisco Couto","raw_affiliation_strings":["Department of Informatics, Faculty of Sciences, University of Lisbon, Edif\u00edcio C6, Piso 3, Campo Grande, 1749-016, Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Faculty of Sciences, University of Lisbon, Edif\u00edcio C6, Piso 3, Campo Grande, 1749-016, Lisbon, Portugal","institution_ids":["https://openalex.org/I141596103"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5049376787"],"corresponding_institution_ids":["https://openalex.org/I141596103"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.13910813,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"930","last_page":"933"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9843999743461609,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9796000123023987,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7030155062675476},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5492852926254272},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.5095994472503662},{"id":"https://openalex.org/keywords/transcription","display_name":"Transcription (linguistics)","score":0.50836580991745},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4930882155895233},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4829256236553192},{"id":"https://openalex.org/keywords/saccharomyces-cerevisiae","display_name":"Saccharomyces cerevisiae","score":0.4359571039676666},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.4192826747894287},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32242244482040405},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2645553648471832},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23004883527755737}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7030155062675476},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5492852926254272},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.5095994472503662},{"id":"https://openalex.org/C179926584","wikidata":"https://www.wikidata.org/wiki/Q207714","display_name":"Transcription (linguistics)","level":2,"score":0.50836580991745},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4930882155895233},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4829256236553192},{"id":"https://openalex.org/C2777576037","wikidata":"https://www.wikidata.org/wiki/Q719725","display_name":"Saccharomyces cerevisiae","level":3,"score":0.4359571039676666},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.4192826747894287},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32242244482040405},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2645553648471832},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23004883527755737},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":8,"locations":[{"id":"doi:10.1007/978-3-642-02481-8_142","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-02481-8_142","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.368.2996","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.368.2996","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://xldb.fc.ul.pt/xldb/publications/Machado:GREATGeneRegulation:2009_document.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.368.3940","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.368.3940","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://xldb.fc.ul.pt/xldb/publications/Machado.etal:GREATGeneRegulation:2009_document.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.873.4869","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.873.4869","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://www.researchgate.net/profile/Catia_Machado3/publication/221581636_GREAT_Gene_Regulation_EvAluation_Tool/links/0fcfd511e5570c8202000000.pdf?origin%3Dpublication_detail","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.878.3798","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.878.3798","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://www.researchgate.net/profile/Catia_Machado3/publication/221581636_GREAT_Gene_Regulation_EvAluation_Tool/links/0fcfd511e5570c8202000000.pdf","raw_type":"text"},{"id":"pmh:oai:repositorio.ul.pt:10451/14033","is_oa":true,"landing_page_url":"http://hdl.handle.net/10451/14033","pdf_url":null,"source":{"id":"https://openalex.org/S4306402433","display_name":"Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"master thesis"},{"id":"pmh:oai:repositorio.ul.pt:10451/14794","is_oa":true,"landing_page_url":"http://hdl.handle.net/10451/14794","pdf_url":null,"source":{"id":"https://openalex.org/S4306402433","display_name":"Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"journal article"},{"id":"pmh:oai:repositorio.ul.pt:10451/6159","is_oa":true,"landing_page_url":"http://hdl.handle.net/10451/6159","pdf_url":null,"source":{"id":"https://openalex.org/S4306402433","display_name":"Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"master thesis"}],"best_oa_location":{"id":"pmh:oai:repositorio.ul.pt:10451/14033","is_oa":true,"landing_page_url":"http://hdl.handle.net/10451/14033","pdf_url":null,"source":{"id":"https://openalex.org/S4306402433","display_name":"Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"master thesis"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1491758006","https://openalex.org/W1513416945","https://openalex.org/W1524141331","https://openalex.org/W1570448133","https://openalex.org/W1572978214","https://openalex.org/W1594031697","https://openalex.org/W1659833910","https://openalex.org/W1856379730","https://openalex.org/W1965942536","https://openalex.org/W1971055992","https://openalex.org/W1976097579","https://openalex.org/W1980948656","https://openalex.org/W1990987722","https://openalex.org/W2035967403","https://openalex.org/W2084168100","https://openalex.org/W2096525273","https://openalex.org/W2096939566","https://openalex.org/W2103017472","https://openalex.org/W2108671185","https://openalex.org/W2117805756","https://openalex.org/W2123318061","https://openalex.org/W2124342021","https://openalex.org/W2127057035","https://openalex.org/W2127563440","https://openalex.org/W2127603354","https://openalex.org/W2137215472","https://openalex.org/W2144449189","https://openalex.org/W2147258942","https://openalex.org/W2162891889","https://openalex.org/W3085162807","https://openalex.org/W4250297812","https://openalex.org/W4297957988"],"related_works":["https://openalex.org/W4388853415","https://openalex.org/W4315558101","https://openalex.org/W3200271510","https://openalex.org/W63366483","https://openalex.org/W1516770101","https://openalex.org/W1897466773","https://openalex.org/W2357011584","https://openalex.org/W4380882399","https://openalex.org/W2623087137","https://openalex.org/W4229920640"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
