{"id":"https://openalex.org/W1603341987","doi":"https://doi.org/10.1007/978-3-642-02441-2_27","title":"Finding All Sorting Tandem Duplication Random Loss Operations","display_name":"Finding All Sorting Tandem Duplication Random Loss Operations","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1603341987","doi":"https://doi.org/10.1007/978-3-642-02441-2_27","mag":"1603341987"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-02441-2_27","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-02441-2_27","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://portal.findresearcher.sdu.dk/da/publications/a27fb298-0704-4ca8-8604-260c611292a0","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039370686","display_name":"Matthias Bernt","orcid":"https://orcid.org/0000-0003-3763-0797"},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Matthias Bernt","raw_affiliation_strings":["Parallel Computing and Complex Systems Group, Department of Computer Science, University of Leipzig, Germany"],"affiliations":[{"raw_affiliation_string":"Parallel Computing and Complex Systems Group, Department of Computer Science, University of Leipzig, Germany","institution_ids":["https://openalex.org/I926574661"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082847510","display_name":"Ming-Chiang Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Ming-Chiang Chen","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Taiwan University, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Taiwan University, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078883427","display_name":"Daniel Merkle","orcid":"https://orcid.org/0000-0001-7792-375X"},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Daniel Merkle","raw_affiliation_strings":["Department of Mathematics and Computer Science, University of Southern Denmark, Odense, Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science, University of Southern Denmark, Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006417580","display_name":"Hung-Lung Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Hung-Lung Wang","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Taiwan University, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Taiwan University, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033888490","display_name":"Kun\u2010Mao Chao","orcid":"https://orcid.org/0000-0003-2837-1279"},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Kun-Mao Chao","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Taiwan University, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Taiwan University, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016253883","display_name":"Martin Middendorf","orcid":"https://orcid.org/0000-0002-5426-1092"},"institutions":[{"id":"https://openalex.org/I926574661","display_name":"Leipzig University","ror":"https://ror.org/03s7gtk40","country_code":"DE","type":"education","lineage":["https://openalex.org/I926574661"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Martin Middendorf","raw_affiliation_strings":["Parallel Computing and Complex Systems Group, Department of Computer Science, University of Leipzig, Germany"],"affiliations":[{"raw_affiliation_string":"Parallel Computing and Complex Systems Group, Department of Computer Science, University of Leipzig, Germany","institution_ids":["https://openalex.org/I926574661"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5039370686"],"corresponding_institution_ids":["https://openalex.org/I926574661"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.7867,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.7710678,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"301","last_page":"313"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.991100013256073,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sorting","display_name":"Sorting","score":0.8522469997406006},{"id":"https://openalex.org/keywords/permutation","display_name":"Permutation (music)","score":0.6875306367874146},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6854555606842041},{"id":"https://openalex.org/keywords/gene-duplication","display_name":"Gene duplication","score":0.6061667799949646},{"id":"https://openalex.org/keywords/sorting-network","display_name":"Sorting network","score":0.5724679231643677},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5374228954315186},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5078118443489075},{"id":"https://openalex.org/keywords/coalescent-theory","display_name":"Coalescent theory","score":0.48806536197662354},{"id":"https://openalex.org/keywords/sorting-algorithm","display_name":"Sorting algorithm","score":0.47200465202331543},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4580513536930084},{"id":"https://openalex.org/keywords/random-permutation","display_name":"Random permutation","score":0.4125634431838989},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.40859270095825195},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.34902769327163696},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.33819282054901123},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.2823469042778015},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.26291966438293457},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23226067423820496},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.22768476605415344},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19444531202316284},{"id":"https://openalex.org/keywords/phylogenetics","display_name":"Phylogenetics","score":0.0680823028087616}],"concepts":[{"id":"https://openalex.org/C111696304","wikidata":"https://www.wikidata.org/wiki/Q2303697","display_name":"Sorting","level":2,"score":0.8522469997406006},{"id":"https://openalex.org/C21308566","wikidata":"https://www.wikidata.org/wiki/Q7169365","display_name":"Permutation (music)","level":2,"score":0.6875306367874146},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6854555606842041},{"id":"https://openalex.org/C7602840","wikidata":"https://www.wikidata.org/wiki/Q746284","display_name":"Gene duplication","level":3,"score":0.6061667799949646},{"id":"https://openalex.org/C64540648","wikidata":"https://www.wikidata.org/wiki/Q646477","display_name":"Sorting network","level":4,"score":0.5724679231643677},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5374228954315186},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5078118443489075},{"id":"https://openalex.org/C2554327","wikidata":"https://www.wikidata.org/wiki/Q2698599","display_name":"Coalescent theory","level":4,"score":0.48806536197662354},{"id":"https://openalex.org/C108094655","wikidata":"https://www.wikidata.org/wiki/Q181593","display_name":"Sorting algorithm","level":3,"score":0.47200465202331543},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4580513536930084},{"id":"https://openalex.org/C200985842","wikidata":"https://www.wikidata.org/wiki/Q3375503","display_name":"Random permutation","level":3,"score":0.4125634431838989},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.40859270095825195},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.34902769327163696},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.33819282054901123},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.2823469042778015},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.26291966438293457},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23226067423820496},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.22768476605415344},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19444531202316284},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.0680823028087616},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C2777210771","wikidata":"https://www.wikidata.org/wiki/Q4927124","display_name":"Block (permutation group theory)","level":2,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-3-642-02441-2_27","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-02441-2_27","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:sdu.dk:openaire_cris_publications/cd101170-01cd-11df-aefb-000ea68e967b","is_oa":false,"landing_page_url":"https://portal.findresearcher.sdu.dk/da/publications/cd101170-01cd-11df-aefb-000ea68e967b","pdf_url":null,"source":{"id":"https://openalex.org/S4306400423","display_name":"University of Southern Denmark Research Portal (University of Southern Denmark)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177969490","host_organization_name":"University of Southern Denmark","host_organization_lineage":["https://openalex.org/I177969490"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Bernt, M, Chen, M-C, Merkle, D, Wang, H-L, Chao, K-M & Middendorf, M 2009, Finding All Sorting Tandem Duplication Random Loss Operations. in Combinatorial Pattern Matching (LNCS). Springer, Lecture Notes in Computer Science, no. 5577, pp. 301-313, 20th Annual Symposium on Combinatorial Pattern Matching (CPM 2009), Lille, France, 24/08/2010. https://doi.org/10.1007/978-3-642-02441-2_27","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:lips.informatik.uni-leipzig.de:1034","is_oa":false,"landing_page_url":"http://lips.informatik.uni-leipzig.de/?q=node/1034","pdf_url":null,"source":{"id":"https://openalex.org/S4377196964","display_name":"Publikation Server (Leipzig University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I926574661","host_organization_name":"Leipzig University","host_organization_lineage":["https://openalex.org/I926574661"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Accepted for 20th Annual Symposium on Combinatorial Pattern Matching (CPM 2009).","raw_type":""},{"id":"pmh:oai:sdu.dk:openaire_cris_publications/a27fb298-0704-4ca8-8604-260c611292a0","is_oa":true,"landing_page_url":"https://portal.findresearcher.sdu.dk/da/publications/a27fb298-0704-4ca8-8604-260c611292a0","pdf_url":null,"source":{"id":"https://openalex.org/S4306400423","display_name":"University of Southern Denmark Research Portal (University of Southern Denmark)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177969490","host_organization_name":"University of Southern Denmark","host_organization_lineage":["https://openalex.org/I177969490"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bernt , M , Chen , K Y , Chen , M C , Chu , A C , Merkle , D , Wang , H L , Chao , K M & Middendorf , M 2011 , ' Finding all sorting tandem duplication random loss operations ' , Journal of Discrete Algorithms , vol. 9 , no. 1 , pp. 32-48 . https://doi.org/10.1016/j.jda.2010.09.006","raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:sdu.dk:openaire_cris_publications/a27fb298-0704-4ca8-8604-260c611292a0","is_oa":true,"landing_page_url":"https://portal.findresearcher.sdu.dk/da/publications/a27fb298-0704-4ca8-8604-260c611292a0","pdf_url":null,"source":{"id":"https://openalex.org/S4306400423","display_name":"University of Southern Denmark Research Portal (University of Southern Denmark)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177969490","host_organization_name":"University of Southern Denmark","host_organization_lineage":["https://openalex.org/I177969490"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bernt , M , Chen , K Y , Chen , M C , Chu , A C , Merkle , D , Wang , H L , Chao , K M & Middendorf , M 2011 , ' Finding all sorting tandem duplication random loss operations ' , Journal of Discrete Algorithms , vol. 9 , no. 1 , pp. 32-48 . https://doi.org/10.1016/j.jda.2010.09.006","raw_type":"article"},"sustainable_development_goals":[{"score":0.5600000023841858,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1547622250","https://openalex.org/W1795360038","https://openalex.org/W1975301156","https://openalex.org/W2019183314","https://openalex.org/W2023749136","https://openalex.org/W2035816193","https://openalex.org/W2045235028","https://openalex.org/W2095867210","https://openalex.org/W2102813451","https://openalex.org/W2112570440","https://openalex.org/W2117771638","https://openalex.org/W2141619234","https://openalex.org/W2148699297","https://openalex.org/W2153520172","https://openalex.org/W2157233923","https://openalex.org/W2160672070","https://openalex.org/W4236702045"],"related_works":["https://openalex.org/W2184131469","https://openalex.org/W2396743875","https://openalex.org/W4321748008","https://openalex.org/W2074196947","https://openalex.org/W1887300513","https://openalex.org/W2094179388","https://openalex.org/W2797610470","https://openalex.org/W2120153268","https://openalex.org/W4297729179","https://openalex.org/W102744014"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2016-06-24T00:00:00"}