{"id":"https://openalex.org/W1578951231","doi":"https://doi.org/10.1007/978-3-642-02008-7_3","title":"Boosting Protein Threading Accuracy","display_name":"Boosting Protein Threading Accuracy","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1578951231","doi":"https://doi.org/10.1007/978-3-642-02008-7_3","mag":"1578951231","pmid":"https://pubmed.ncbi.nlm.nih.gov/22506254"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-02008-7_3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-02008-7_3","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047373240","display_name":"Jian Peng","orcid":"https://orcid.org/0000-0002-1820-4015"},"institutions":[{"id":"https://openalex.org/I160992636","display_name":"Toyota Technological Institute at Chicago","ror":"https://ror.org/02sn5gb64","country_code":"US","type":"education","lineage":["https://openalex.org/I160992636"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jian Peng","raw_affiliation_strings":["Toyota Technological Institute at Chicago, Chicago, IL, USA, 60637"],"affiliations":[{"raw_affiliation_string":"Toyota Technological Institute at Chicago, Chicago, IL, USA, 60637","institution_ids":["https://openalex.org/I160992636"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019398608","display_name":"Jinbo Xu","orcid":"https://orcid.org/0000-0001-7111-4839"},"institutions":[{"id":"https://openalex.org/I160992636","display_name":"Toyota Technological Institute at Chicago","ror":"https://ror.org/02sn5gb64","country_code":"US","type":"education","lineage":["https://openalex.org/I160992636"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jinbo Xu","raw_affiliation_strings":["Toyota Technological Institute at Chicago, Chicago, IL, USA, 60637"],"affiliations":[{"raw_affiliation_string":"Toyota Technological Institute at Chicago, Chicago, IL, USA, 60637","institution_ids":["https://openalex.org/I160992636"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5047373240"],"corresponding_institution_ids":["https://openalex.org/I160992636"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":7.8913,"has_fulltext":false,"cited_by_count":76,"citation_normalized_percentile":{"value":0.97935599,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"5541","issue":null,"first_page":"31","last_page":"45"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/threading","display_name":"Threading (protein sequence)","score":0.8010106086730957},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7784806489944458},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5677238702774048},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5432930588722229},{"id":"https://openalex.org/keywords/boosting","display_name":"Boosting (machine learning)","score":0.5342764854431152},{"id":"https://openalex.org/keywords/leverage","display_name":"Leverage (statistics)","score":0.4823302924633026},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.4452126920223236},{"id":"https://openalex.org/keywords/conditional-random-field","display_name":"Conditional random field","score":0.41856369376182556},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.4158509373664856},{"id":"https://openalex.org/keywords/decision-tree","display_name":"Decision tree","score":0.4132387340068817},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4064553678035736},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.37850263714790344},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.19074949622154236}],"concepts":[{"id":"https://openalex.org/C200307862","wikidata":"https://www.wikidata.org/wiki/Q7797175","display_name":"Threading (protein sequence)","level":3,"score":0.8010106086730957},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7784806489944458},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5677238702774048},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5432930588722229},{"id":"https://openalex.org/C46686674","wikidata":"https://www.wikidata.org/wiki/Q466303","display_name":"Boosting (machine learning)","level":2,"score":0.5342764854431152},{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.4823302924633026},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.4452126920223236},{"id":"https://openalex.org/C152565575","wikidata":"https://www.wikidata.org/wiki/Q1124538","display_name":"Conditional random field","level":2,"score":0.41856369376182556},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.4158509373664856},{"id":"https://openalex.org/C84525736","wikidata":"https://www.wikidata.org/wiki/Q831366","display_name":"Decision tree","level":2,"score":0.4132387340068817},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4064553678035736},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.37850263714790344},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.19074949622154236},{"id":"https://openalex.org/C46141821","wikidata":"https://www.wikidata.org/wiki/Q209402","display_name":"Nuclear magnetic resonance","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-642-02008-7_3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-02008-7_3","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmid:22506254","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22506254","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Research in computational molecular biology : ... Annual International Conference, RECOMB ... : proceedings. RECOMB (Conference : 2005- )","raw_type":null},{"id":"pmh:oai:europepmc.org:2331226","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3325114","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":60,"referenced_works":["https://openalex.org/W1489075871","https://openalex.org/W1852207006","https://openalex.org/W1978304263","https://openalex.org/W1996357466","https://openalex.org/W2002806284","https://openalex.org/W2003852785","https://openalex.org/W2004228538","https://openalex.org/W2008708467","https://openalex.org/W2020644553","https://openalex.org/W2026648849","https://openalex.org/W2051969447","https://openalex.org/W2062327179","https://openalex.org/W2072163721","https://openalex.org/W2083445888","https://openalex.org/W2084131216","https://openalex.org/W2084466582","https://openalex.org/W2085277871","https://openalex.org/W2089933214","https://openalex.org/W2093591760","https://openalex.org/W2099075703","https://openalex.org/W2101220662","https://openalex.org/W2102245393","https://openalex.org/W2102677343","https://openalex.org/W2104710719","https://openalex.org/W2105099387","https://openalex.org/W2106116715","https://openalex.org/W2108376320","https://openalex.org/W2117545594","https://openalex.org/W2118851904","https://openalex.org/W2120247405","https://openalex.org/W2124371326","https://openalex.org/W2125838338","https://openalex.org/W2140244239","https://openalex.org/W2142082723","https://openalex.org/W2142529984","https://openalex.org/W2143739717","https://openalex.org/W2143763906","https://openalex.org/W2144357990","https://openalex.org/W2144483796","https://openalex.org/W2144681424","https://openalex.org/W2145268834","https://openalex.org/W2145371840","https://openalex.org/W2145541064","https://openalex.org/W2146086467","https://openalex.org/W2146325624","https://openalex.org/W2147667050","https://openalex.org/W2147880316","https://openalex.org/W2149636054","https://openalex.org/W2151904894","https://openalex.org/W2153187042","https://openalex.org/W2153193090","https://openalex.org/W2156515921","https://openalex.org/W2160672912","https://openalex.org/W2160757968","https://openalex.org/W2164843630","https://openalex.org/W2166912610","https://openalex.org/W2318524498","https://openalex.org/W4238480142","https://openalex.org/W4252178616","https://openalex.org/W4253573210"],"related_works":["https://openalex.org/W2253761889","https://openalex.org/W2411998238","https://openalex.org/W3108206494","https://openalex.org/W2462594639","https://openalex.org/W2739726746","https://openalex.org/W4242380336","https://openalex.org/W2143233657","https://openalex.org/W3149404221","https://openalex.org/W2380350064","https://openalex.org/W2136856901"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":12},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":5}],"updated_date":"2026-03-27T14:29:43.386196","created_date":"2025-10-10T00:00:00"}
