{"id":"https://openalex.org/W1785626355","doi":"https://doi.org/10.1007/978-3-642-01551-9_26","title":"Mining of cis-Regulatory Motifs Associated with Tissue-Specific Alternative Splicing","display_name":"Mining of cis-Regulatory Motifs Associated with Tissue-Specific Alternative Splicing","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1785626355","doi":"https://doi.org/10.1007/978-3-642-01551-9_26","mag":"1785626355"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-01551-9_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-01551-9_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100384979","display_name":"Jihye Kim","orcid":"https://orcid.org/0000-0001-8035-8640"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jihye Kim","raw_affiliation_strings":["Bioinformatics Research Center, North Carolina State University, Raleigh, NC, 27606, U.S.A"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Research Center, North Carolina State University, Raleigh, NC, 27606, U.S.A","institution_ids":["https://openalex.org/I137902535"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102409872","display_name":"Sihui Zhao","orcid":null},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sihui Zhao","raw_affiliation_strings":["Bioinformatics Research Center, North Carolina State University, Raleigh, NC, 27606, U.S.A"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Research Center, North Carolina State University, Raleigh, NC, 27606, U.S.A","institution_ids":["https://openalex.org/I137902535"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011043085","display_name":"Brian E. Howard","orcid":"https://orcid.org/0000-0002-6123-7090"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brian E. Howard","raw_affiliation_strings":["Bioinformatics Research Center, North Carolina State University, Raleigh, NC, 27606, U.S.A"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Research Center, North Carolina State University, Raleigh, NC, 27606, U.S.A","institution_ids":["https://openalex.org/I137902535"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058462301","display_name":"Steffen Heber","orcid":"https://orcid.org/0000-0002-1050-3635"},"institutions":[{"id":"https://openalex.org/I137902535","display_name":"North Carolina State University","ror":"https://ror.org/04tj63d06","country_code":"US","type":"education","lineage":["https://openalex.org/I137902535"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steffen Heber","raw_affiliation_strings":["Bioinformatics Research Center, North Carolina State University, Raleigh, NC, 27606, U.S.A"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Research Center, North Carolina State University, Raleigh, NC, 27606, U.S.A","institution_ids":["https://openalex.org/I137902535"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100384979"],"corresponding_institution_ids":["https://openalex.org/I137902535"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.3935,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.816397,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"260","last_page":"271"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13157","display_name":"Cancer-related gene regulation","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.7971076965332031},{"id":"https://openalex.org/keywords/rna-splicing","display_name":"RNA splicing","score":0.7487791180610657},{"id":"https://openalex.org/keywords/alternative-splicing","display_name":"Alternative splicing","score":0.7161684036254883},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5718812346458435},{"id":"https://openalex.org/keywords/sequence-motif","display_name":"Sequence motif","score":0.5128655433654785},{"id":"https://openalex.org/keywords/structural-motif","display_name":"Structural motif","score":0.46303877234458923},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.45421919226646423},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.33043575286865234},{"id":"https://openalex.org/keywords/messenger-rna","display_name":"Messenger RNA","score":0.3277832269668579},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.26384237408638},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.25143134593963623},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.15206483006477356}],"concepts":[{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.7971076965332031},{"id":"https://openalex.org/C54458228","wikidata":"https://www.wikidata.org/wiki/Q237218","display_name":"RNA splicing","level":4,"score":0.7487791180610657},{"id":"https://openalex.org/C194583182","wikidata":"https://www.wikidata.org/wiki/Q21114084","display_name":"Alternative splicing","level":4,"score":0.7161684036254883},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5718812346458435},{"id":"https://openalex.org/C117745874","wikidata":"https://www.wikidata.org/wiki/Q901612","display_name":"Sequence motif","level":3,"score":0.5128655433654785},{"id":"https://openalex.org/C132677234","wikidata":"https://www.wikidata.org/wiki/Q3273544","display_name":"Structural motif","level":2,"score":0.46303877234458923},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.45421919226646423},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.33043575286865234},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.3277832269668579},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.26384237408638},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.25143134593963623},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.15206483006477356},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-642-01551-9_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-01551-9_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:repository.lib.ncsu.edu:1840.16/3709","is_oa":false,"landing_page_url":"http://www.lib.ncsu.edu/resolver/1840.16/3709","pdf_url":null,"source":{"id":"https://openalex.org/S4306402468","display_name":"NCSU Libraries Repository (North Carolina State University Libraries)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I137902535","host_organization_name":"North Carolina State University","host_organization_lineage":["https://openalex.org/I137902535"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":123,"referenced_works":["https://openalex.org/W58918046","https://openalex.org/W102034939","https://openalex.org/W1484413656","https://openalex.org/W1484811165","https://openalex.org/W1506285740","https://openalex.org/W1525462543","https://openalex.org/W1537336823","https://openalex.org/W1542978828","https://openalex.org/W1544139368","https://openalex.org/W1560913816","https://openalex.org/W1566114229","https://openalex.org/W1586999333","https://openalex.org/W1597161471","https://openalex.org/W1673310716","https://openalex.org/W1714107821","https://openalex.org/W1839674003","https://openalex.org/W1869362176","https://openalex.org/W1906561224","https://openalex.org/W1913751664","https://openalex.org/W1965991219","https://openalex.org/W1967618835","https://openalex.org/W1968050545","https://openalex.org/W1971158461","https://openalex.org/W1971278266","https://openalex.org/W1974265704","https://openalex.org/W1980232128","https://openalex.org/W1986113553","https://openalex.org/W1986616689","https://openalex.org/W1986891966","https://openalex.org/W1987413856","https://openalex.org/W1988469584","https://openalex.org/W1988692621","https://openalex.org/W1990601349","https://openalex.org/W1992451058","https://openalex.org/W1994154030","https://openalex.org/W1994955065","https://openalex.org/W1996423252","https://openalex.org/W1996700726","https://openalex.org/W2000473687","https://openalex.org/W2002257163","https://openalex.org/W2002374079","https://openalex.org/W2008491350","https://openalex.org/W2011920499","https://openalex.org/W2013017122","https://openalex.org/W2013340095","https://openalex.org/W2023648355","https://openalex.org/W2027265085","https://openalex.org/W2029760674","https://openalex.org/W2030969394","https://openalex.org/W2035379089","https://openalex.org/W2035946364","https://openalex.org/W2036399606","https://openalex.org/W2037965136","https://openalex.org/W2038921819","https://openalex.org/W2040158750","https://openalex.org/W2042035594","https://openalex.org/W2045131720","https://openalex.org/W2048618925","https://openalex.org/W2051631967","https://openalex.org/W2057306271","https://openalex.org/W2064853889","https://openalex.org/W2065793456","https://openalex.org/W2067501355","https://openalex.org/W2070276431","https://openalex.org/W2070564797","https://openalex.org/W2072088482","https://openalex.org/W2074582967","https://openalex.org/W2075675982","https://openalex.org/W2077689651","https://openalex.org/W2079321730","https://openalex.org/W2087876307","https://openalex.org/W2088440342","https://openalex.org/W2093456341","https://openalex.org/W2097421180","https://openalex.org/W2097800052","https://openalex.org/W2098222328","https://openalex.org/W2102337459","https://openalex.org/W2102711634","https://openalex.org/W2103285706","https://openalex.org/W2104486578","https://openalex.org/W2106696739","https://openalex.org/W2106882534","https://openalex.org/W2107948568","https://openalex.org/W2109936378","https://openalex.org/W2110341083","https://openalex.org/W2113000643","https://openalex.org/W2114858580","https://openalex.org/W2116185451","https://openalex.org/W2117404155","https://openalex.org/W2118823143","https://openalex.org/W2120626547","https://openalex.org/W2125069153","https://openalex.org/W2125508747","https://openalex.org/W2126057141","https://openalex.org/W2128114769","https://openalex.org/W2129682060","https://openalex.org/W2131687179","https://openalex.org/W2132451711","https://openalex.org/W2134880148","https://openalex.org/W2136093058","https://openalex.org/W2136145671","https://openalex.org/W2137860515","https://openalex.org/W2139455449","https://openalex.org/W2143345980","https://openalex.org/W2144121175","https://openalex.org/W2145191876","https://openalex.org/W2149109499","https://openalex.org/W2151308110","https://openalex.org/W2154421114","https://openalex.org/W2156754096","https://openalex.org/W2158020008","https://openalex.org/W2160004152","https://openalex.org/W2160710283","https://openalex.org/W2164395223","https://openalex.org/W2165372900","https://openalex.org/W2166793470","https://openalex.org/W2166797651","https://openalex.org/W2169685494","https://openalex.org/W2171612826","https://openalex.org/W2171945138","https://openalex.org/W3041019241","https://openalex.org/W4244818997","https://openalex.org/W6663668235"],"related_works":["https://openalex.org/W2321791250","https://openalex.org/W4213427798","https://openalex.org/W2564462691","https://openalex.org/W2023199111","https://openalex.org/W2065030615","https://openalex.org/W2885403345","https://openalex.org/W2052498125","https://openalex.org/W4387768639","https://openalex.org/W2094867951","https://openalex.org/W2610941444"],"abstract_inverted_index":null,"counts_by_year":[{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
