{"id":"https://openalex.org/W1840964494","doi":"https://doi.org/10.1007/978-3-642-01184-9_14","title":"Clustering Metagenome Short Reads Using Weighted Proteins","display_name":"Clustering Metagenome Short Reads Using Weighted Proteins","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1840964494","doi":"https://doi.org/10.1007/978-3-642-01184-9_14","mag":"1840964494"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-01184-9_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-01184-9_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013173651","display_name":"Gianluigi Folino","orcid":"https://orcid.org/0000-0002-8139-3445"},"institutions":[{"id":"https://openalex.org/I3005160176","display_name":"Institute for High Performance Computing and Networking","ror":"https://ror.org/04r5fge26","country_code":"IT","type":"facility","lineage":["https://openalex.org/I3005160176","https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Gianluigi Folino","raw_affiliation_strings":["ICAR-CNR, Rende, Italy","ICAR-CNR, RENDE, Italy"],"affiliations":[{"raw_affiliation_string":"ICAR-CNR, Rende, Italy","institution_ids":["https://openalex.org/I3005160176"]},{"raw_affiliation_string":"ICAR-CNR, RENDE, Italy","institution_ids":["https://openalex.org/I3005160176"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039364066","display_name":"Fabio Gori","orcid":"https://orcid.org/0000-0002-9233-0108"},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Fabio Gori","raw_affiliation_strings":["Radboud University, Nijmegen, The Netherlands","\u2002Radboud University, Nijmegen, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Radboud University, Nijmegen, The Netherlands","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"\u2002Radboud University, Nijmegen, The Netherlands","institution_ids":["https://openalex.org/I145872427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036215557","display_name":"Mike S. M. Jetten","orcid":"https://orcid.org/0000-0002-4691-7039"},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Mike S. M. Jetten","raw_affiliation_strings":["Radboud University, Nijmegen, The Netherlands","\u2002Radboud University, Nijmegen, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Radboud University, Nijmegen, The Netherlands","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"\u2002Radboud University, Nijmegen, The Netherlands","institution_ids":["https://openalex.org/I145872427"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089998437","display_name":"Elena Marchiori","orcid":"https://orcid.org/0000-0002-5006-4112"},"institutions":[{"id":"https://openalex.org/I145872427","display_name":"Radboud University Nijmegen","ror":"https://ror.org/016xsfp80","country_code":"NL","type":"education","lineage":["https://openalex.org/I145872427"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Elena Marchiori","raw_affiliation_strings":["Radboud University, Nijmegen, The Netherlands","\u2002Radboud University, Nijmegen, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Radboud University, Nijmegen, The Netherlands","institution_ids":["https://openalex.org/I145872427"]},{"raw_affiliation_string":"\u2002Radboud University, Nijmegen, The Netherlands","institution_ids":["https://openalex.org/I145872427"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5013173651"],"corresponding_institution_ids":["https://openalex.org/I3005160176"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.858,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.85477506,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"152","last_page":"163"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.8449616432189941},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8175020813941956},{"id":"https://openalex.org/keywords/weighting","display_name":"Weighting","score":0.6290538907051086},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.6145641207695007},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.6026086807250977},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.5613108277320862},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5524609684944153},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.43682661652565},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3337252140045166},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09510168433189392}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.8449616432189941},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8175020813941956},{"id":"https://openalex.org/C183115368","wikidata":"https://www.wikidata.org/wiki/Q856577","display_name":"Weighting","level":2,"score":0.6290538907051086},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.6145641207695007},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.6026086807250977},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.5613108277320862},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5524609684944153},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.43682661652565},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3337252140045166},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09510168433189392},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-642-01184-9_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-01184-9_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.216.7877","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.216.7877","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cs.ru.nl/~elenam/metagen_clus1.pdf","raw_type":"text"},{"id":"pmh:oai:repository.ubn.ru.nl:2066/75322","is_oa":false,"landing_page_url":"http://hdl.handle.net/2066/75322","pdf_url":null,"source":{"id":"https://openalex.org/S4306401067","display_name":"Radboud Repository (Radboud University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I145872427","host_organization_name":"Radboud University Nijmegen","host_organization_lineage":["https://openalex.org/I145872427"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Pizzuti, C.; Ritchie, M.D.; Giacobini, M. (ed.), Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics, pp. 152-163","raw_type":"Article in monograph or in proceedings"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4399999976158142,"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W1534075338","https://openalex.org/W1575333164","https://openalex.org/W1791999417","https://openalex.org/W1841715584","https://openalex.org/W1998077837","https://openalex.org/W2000190756","https://openalex.org/W2023911006","https://openalex.org/W2055043387","https://openalex.org/W2056930789","https://openalex.org/W2071729347","https://openalex.org/W2090237271","https://openalex.org/W2103970813","https://openalex.org/W2132415967","https://openalex.org/W2132468289","https://openalex.org/W2136503713"],"related_works":["https://openalex.org/W638577851","https://openalex.org/W2968354375","https://openalex.org/W2359440920","https://openalex.org/W2889550857","https://openalex.org/W3013372948","https://openalex.org/W3135997498","https://openalex.org/W4242417330","https://openalex.org/W2180954594","https://openalex.org/W4388282505","https://openalex.org/W3198631238"],"abstract_inverted_index":null,"counts_by_year":[{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
