{"id":"https://openalex.org/W1583681965","doi":"https://doi.org/10.1007/978-3-642-00727-9_33","title":"Computational Prediction of Genes Translationally Regulated by Cytoplasmic Polyadenylation Elements","display_name":"Computational Prediction of Genes Translationally Regulated by Cytoplasmic Polyadenylation Elements","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1583681965","doi":"https://doi.org/10.1007/978-3-642-00727-9_33","mag":"1583681965"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-00727-9_33","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-00727-9_33","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034707578","display_name":"Eric C. Rouchka","orcid":"https://orcid.org/0000-0003-3487-6572"},"institutions":[{"id":"https://openalex.org/I142740786","display_name":"University of Louisville","ror":"https://ror.org/01ckdn478","country_code":"US","type":"education","lineage":["https://openalex.org/I142740786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eric C. Rouchka","raw_affiliation_strings":["Department of Computer Engineering and Computer Science, J.B. Speed School of Engineering, University of Louisville, 123 JB Speed Building, Louisville, Kentucky, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Engineering and Computer Science, J.B. Speed School of Engineering, University of Louisville, 123 JB Speed Building, Louisville, Kentucky, USA","institution_ids":["https://openalex.org/I142740786"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101946248","display_name":"Xiangping Wang","orcid":"https://orcid.org/0009-0002-7595-1698"},"institutions":[{"id":"https://openalex.org/I142740786","display_name":"University of Louisville","ror":"https://ror.org/01ckdn478","country_code":"US","type":"education","lineage":["https://openalex.org/I142740786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiangping Wang","raw_affiliation_strings":["Department of Anatomical Sciences and Neurobiology, University of Louisville, 500 South Preston Street, Louisville, Kentucky, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Anatomical Sciences and Neurobiology, University of Louisville, 500 South Preston Street, Louisville, Kentucky, USA","institution_ids":["https://openalex.org/I142740786"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102637962","display_name":"James H. Graham","orcid":null},"institutions":[{"id":"https://openalex.org/I142740786","display_name":"University of Louisville","ror":"https://ror.org/01ckdn478","country_code":"US","type":"education","lineage":["https://openalex.org/I142740786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James H. Graham","raw_affiliation_strings":["Department of Electrical and Computer Engineering, J.B. Speed School of Engineering, University of Louisville, Louisville, Kentucky, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, J.B. Speed School of Engineering, University of Louisville, Louisville, Kentucky, USA","institution_ids":["https://openalex.org/I142740786"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101840051","display_name":"Nigel G. F. Cooper","orcid":"https://orcid.org/0000-0001-6598-5136"},"institutions":[{"id":"https://openalex.org/I142740786","display_name":"University of Louisville","ror":"https://ror.org/01ckdn478","country_code":"US","type":"education","lineage":["https://openalex.org/I142740786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nigel G. F. Cooper","raw_affiliation_strings":["Department of Anatomical Sciences and Neurobiology, University of Louisville, 500 South Preston Street, Louisville, Kentucky, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Anatomical Sciences and Neurobiology, University of Louisville, 500 South Preston Street, Louisville, Kentucky, USA","institution_ids":["https://openalex.org/I142740786"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.4653,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.65705002,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"353","last_page":"361"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/polyadenylation","display_name":"Polyadenylation","score":0.9620988368988037},{"id":"https://openalex.org/keywords/three-prime-untranslated-region","display_name":"Three prime untranslated region","score":0.5925636887550354},{"id":"https://openalex.org/keywords/untranslated-region","display_name":"Untranslated region","score":0.5703927874565125},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5342776775360107},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4629081189632416},{"id":"https://openalex.org/keywords/messenger-rna","display_name":"Messenger RNA","score":0.4591194689273834},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4550739824771881},{"id":"https://openalex.org/keywords/translation","display_name":"Translation (biology)","score":0.4477078914642334},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4143187999725342}],"concepts":[{"id":"https://openalex.org/C142575336","wikidata":"https://www.wikidata.org/wiki/Q412148","display_name":"Polyadenylation","level":4,"score":0.9620988368988037},{"id":"https://openalex.org/C22667442","wikidata":"https://www.wikidata.org/wiki/Q3272830","display_name":"Three prime untranslated region","level":5,"score":0.5925636887550354},{"id":"https://openalex.org/C89604277","wikidata":"https://www.wikidata.org/wiki/Q424345","display_name":"Untranslated region","level":4,"score":0.5703927874565125},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5342776775360107},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4629081189632416},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.4591194689273834},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4550739824771881},{"id":"https://openalex.org/C149364088","wikidata":"https://www.wikidata.org/wiki/Q185917","display_name":"Translation (biology)","level":4,"score":0.4477078914642334},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4143187999725342}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-642-00727-9_33","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-00727-9_33","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.708.836","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.708.836","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.louisville.edu/localresources/papers/CPEB-LNCS-Published.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":36,"referenced_works":["https://openalex.org/W1961615758","https://openalex.org/W1973505925","https://openalex.org/W1975924111","https://openalex.org/W1993316397","https://openalex.org/W1998300401","https://openalex.org/W2009629503","https://openalex.org/W2041712585","https://openalex.org/W2045462467","https://openalex.org/W2050031321","https://openalex.org/W2054454491","https://openalex.org/W2055043387","https://openalex.org/W2058044724","https://openalex.org/W2062925747","https://openalex.org/W2067064841","https://openalex.org/W2069930342","https://openalex.org/W2080667183","https://openalex.org/W2091759633","https://openalex.org/W2092454702","https://openalex.org/W2099159538","https://openalex.org/W2105545925","https://openalex.org/W2106801137","https://openalex.org/W2115734898","https://openalex.org/W2116211027","https://openalex.org/W2129448726","https://openalex.org/W2132397441","https://openalex.org/W2134366512","https://openalex.org/W2135039550","https://openalex.org/W2140183291","https://openalex.org/W2142418779","https://openalex.org/W2145295592","https://openalex.org/W2149429041","https://openalex.org/W2157315395","https://openalex.org/W2162111678","https://openalex.org/W2167799586","https://openalex.org/W2184610180","https://openalex.org/W4250052351"],"related_works":["https://openalex.org/W2073461718","https://openalex.org/W2414204398","https://openalex.org/W2019107363","https://openalex.org/W2750747499","https://openalex.org/W2773320331","https://openalex.org/W1535356260","https://openalex.org/W2002886563","https://openalex.org/W2025227979","https://openalex.org/W2063674507","https://openalex.org/W2037244830"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
