{"id":"https://openalex.org/W1559706124","doi":"https://doi.org/10.1007/978-3-642-00727-9_32","title":"Alignment and Analysis of Closely Related Genomes","display_name":"Alignment and Analysis of Closely Related Genomes","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1559706124","doi":"https://doi.org/10.1007/978-3-642-00727-9_32","mag":"1559706124"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-642-00727-9_32","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-00727-9_32","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016311889","display_name":"Allison Regier","orcid":"https://orcid.org/0000-0002-1932-8714"},"institutions":[{"id":"https://openalex.org/I107639228","display_name":"University of Notre Dame","ror":"https://ror.org/00mkhxb43","country_code":"US","type":"education","lineage":["https://openalex.org/I107639228"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Allison Regier","raw_affiliation_strings":["Computer Science and Engineering, University of Notre Dame, Notre Dame, IN 46556, USA"],"affiliations":[{"raw_affiliation_string":"Computer Science and Engineering, University of Notre Dame, Notre Dame, IN 46556, USA","institution_ids":["https://openalex.org/I107639228"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062433637","display_name":"Mark A. Olson","orcid":"https://orcid.org/0000-0003-0398-5063"},"institutions":[{"id":"https://openalex.org/I107639228","display_name":"University of Notre Dame","ror":"https://ror.org/00mkhxb43","country_code":"US","type":"education","lineage":["https://openalex.org/I107639228"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Olson","raw_affiliation_strings":["Computer Science and Engineering, University of Notre Dame, Notre Dame, IN 46556, USA"],"affiliations":[{"raw_affiliation_string":"Computer Science and Engineering, University of Notre Dame, Notre Dame, IN 46556, USA","institution_ids":["https://openalex.org/I107639228"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019857186","display_name":"Scott Emrich","orcid":"https://orcid.org/0000-0002-5741-4517"},"institutions":[{"id":"https://openalex.org/I107639228","display_name":"University of Notre Dame","ror":"https://ror.org/00mkhxb43","country_code":"US","type":"education","lineage":["https://openalex.org/I107639228"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Scott J. Emrich","raw_affiliation_strings":["Computer Science and Engineering, University of Notre Dame, Notre Dame, IN 46556, USA"],"affiliations":[{"raw_affiliation_string":"Computer Science and Engineering, University of Notre Dame, Notre Dame, IN 46556, USA","institution_ids":["https://openalex.org/I107639228"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5016311889"],"corresponding_institution_ids":["https://openalex.org/I107639228"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0993926,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"343","last_page":"352"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.7738560438156128},{"id":"https://openalex.org/keywords/anopheles-gambiae","display_name":"Anopheles gambiae","score":0.6306624412536621},{"id":"https://openalex.org/keywords/leverage","display_name":"Leverage (statistics)","score":0.6031804084777832},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.5597161650657654},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.550101637840271},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.5271199345588684},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"Comparative genomics","score":0.47902244329452515},{"id":"https://openalex.org/keywords/population-genomics","display_name":"Population genomics","score":0.455646812915802},{"id":"https://openalex.org/keywords/plasmodium-falciparum","display_name":"Plasmodium falciparum","score":0.4427407383918762},{"id":"https://openalex.org/keywords/malaria","display_name":"Malaria","score":0.4394719898700714},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.4345892369747162},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.43056631088256836},{"id":"https://openalex.org/keywords/reference-genome","display_name":"Reference genome","score":0.4171590209007263},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3861725926399231},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.37714630365371704},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.27244797348976135},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21907863020896912},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.06672057509422302}],"concepts":[{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.7738560438156128},{"id":"https://openalex.org/C2776802408","wikidata":"https://www.wikidata.org/wiki/Q135237","display_name":"Anopheles gambiae","level":3,"score":0.6306624412536621},{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.6031804084777832},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5597161650657654},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.550101637840271},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5271199345588684},{"id":"https://openalex.org/C105176652","wikidata":"https://www.wikidata.org/wiki/Q1147112","display_name":"Comparative genomics","level":5,"score":0.47902244329452515},{"id":"https://openalex.org/C2779040068","wikidata":"https://www.wikidata.org/wiki/Q7229807","display_name":"Population genomics","level":5,"score":0.455646812915802},{"id":"https://openalex.org/C2778371730","wikidata":"https://www.wikidata.org/wiki/Q311383","display_name":"Plasmodium falciparum","level":3,"score":0.4427407383918762},{"id":"https://openalex.org/C2778048844","wikidata":"https://www.wikidata.org/wiki/Q12156","display_name":"Malaria","level":2,"score":0.4394719898700714},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.4345892369747162},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.43056631088256836},{"id":"https://openalex.org/C192953774","wikidata":"https://www.wikidata.org/wiki/Q7307127","display_name":"Reference genome","level":4,"score":0.4171590209007263},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3861725926399231},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.37714630365371704},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.27244797348976135},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21907863020896912},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.06672057509422302},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-642-00727-9_32","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-642-00727-9_32","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":27,"referenced_works":["https://openalex.org/W107339557","https://openalex.org/W1482360569","https://openalex.org/W1964918240","https://openalex.org/W1986009232","https://openalex.org/W1988981743","https://openalex.org/W1991330646","https://openalex.org/W2027448315","https://openalex.org/W2054624670","https://openalex.org/W2057998009","https://openalex.org/W2074231493","https://openalex.org/W2087064593","https://openalex.org/W2095685450","https://openalex.org/W2095824228","https://openalex.org/W2103241734","https://openalex.org/W2107282968","https://openalex.org/W2110291136","https://openalex.org/W2112132489","https://openalex.org/W2116790427","https://openalex.org/W2118533197","https://openalex.org/W2122598328","https://openalex.org/W2126060886","https://openalex.org/W2126334905","https://openalex.org/W2130640131","https://openalex.org/W2144866873","https://openalex.org/W2149517531","https://openalex.org/W2155237411","https://openalex.org/W6602210346"],"related_works":["https://openalex.org/W2487162673","https://openalex.org/W2793211469","https://openalex.org/W2949152769","https://openalex.org/W4394813321","https://openalex.org/W2091770942","https://openalex.org/W2157922946","https://openalex.org/W4317469254","https://openalex.org/W2051155275","https://openalex.org/W2988104819","https://openalex.org/W2952431852"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
