{"id":"https://openalex.org/W185869303","doi":"https://doi.org/10.1007/978-3-540-92910-9_37","title":"Computational Nature of Gene Assembly in Ciliates","display_name":"Computational Nature of Gene Assembly in Ciliates","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W185869303","doi":"https://doi.org/10.1007/978-3-540-92910-9_37","mag":"185869303"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-92910-9_37","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-92910-9_37","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Handbook of Natural Computing","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://hdl.handle.net/1942/14666","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057971093","display_name":"Robert Brijder","orcid":"https://orcid.org/0000-0002-8912-1735"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Robert Brijder","raw_affiliation_strings":["Leiden Institute of Advanced Computer Science, Universiteit Leiden, Leiden, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Leiden Institute of Advanced Computer Science, Universiteit Leiden, Leiden, The Netherlands","institution_ids":["https://openalex.org/I121797337"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059512715","display_name":"Mark Daley","orcid":"https://orcid.org/0000-0002-6939-9772"},"institutions":[{"id":"https://openalex.org/I125749732","display_name":"Western University","ror":"https://ror.org/02grkyz14","country_code":"CA","type":"education","lineage":["https://openalex.org/I125749732"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Mark Daley","raw_affiliation_strings":["Departments of Computer Science and Biology, University of Western Ontario, London, Ontario, Canada"],"affiliations":[{"raw_affiliation_string":"Departments of Computer Science and Biology, University of Western Ontario, London, Ontario, Canada","institution_ids":["https://openalex.org/I125749732"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054372678","display_name":"Tero Harju","orcid":"https://orcid.org/0000-0002-9640-6309"},"institutions":[{"id":"https://openalex.org/I155660961","display_name":"University of Turku","ror":"https://ror.org/05vghhr25","country_code":"FI","type":"education","lineage":["https://openalex.org/I155660961"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Tero Harju","raw_affiliation_strings":["Department of Mathematics, University of Turku, Turku, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Turku, Turku, Finland","institution_ids":["https://openalex.org/I155660961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083450874","display_name":"Nata\u0161a Jonoska","orcid":null},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nata\u0161a Jonoska","raw_affiliation_strings":["Department of Mathematics, University of South Florida, Tampa, FL, USA"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of South Florida, Tampa, FL, USA","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047091186","display_name":"Ion Petre","orcid":"https://orcid.org/0000-0002-5014-5529"},"institutions":[{"id":"https://openalex.org/I130217899","display_name":"\u00c5bo Akademi University","ror":"https://ror.org/029pk6x14","country_code":"FI","type":"education","lineage":["https://openalex.org/I130217899"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Ion Petre","raw_affiliation_strings":["Department of Information Technologies, \u00c5bo Akademi University, Turku, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Information Technologies, \u00c5bo Akademi University, Turku, Finland","institution_ids":["https://openalex.org/I130217899"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110486000","display_name":"Grzegorz Rozenberg","orcid":null},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]},{"id":"https://openalex.org/I188538660","display_name":"University of Colorado Boulder","ror":"https://ror.org/02ttsq026","country_code":"US","type":"education","lineage":["https://openalex.org/I188538660"]}],"countries":["NL","US"],"is_corresponding":false,"raw_author_name":"Grzegorz Rozenberg","raw_affiliation_strings":["Computer Science Department, University of Colorado, Boulder, USA","Department of Computer Science, University of Colorado, Boulder, CO, USA","LIACS, Leiden University, Leiden, The Netherlands","Leiden Institute of Advanced Computer Science, Universiteit Leiden, Leiden, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Computer Science Department, University of Colorado, Boulder, USA","institution_ids":["https://openalex.org/I188538660"]},{"raw_affiliation_string":"Department of Computer Science, University of Colorado, Boulder, CO, USA","institution_ids":["https://openalex.org/I188538660"]},{"raw_affiliation_string":"LIACS, Leiden University, Leiden, The Netherlands","institution_ids":["https://openalex.org/I121797337"]},{"raw_affiliation_string":"Leiden Institute of Advanced Computer Science, Universiteit Leiden, Leiden, The Netherlands","institution_ids":["https://openalex.org/I121797337"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5057971093"],"corresponding_institution_ids":["https://openalex.org/I121797337"],"apc_list":null,"apc_paid":null,"fwci":3.773,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.93342513,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"1233","last_page":"1280"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11879","display_name":"Protist diversity and phylogeny","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11879","display_name":"Protist diversity and phylogeny","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/macronucleus","display_name":"Macronucleus","score":0.7575531005859375},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5305773615837097},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.47816047072410583},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4223908483982086},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.27288806438446045}],"concepts":[{"id":"https://openalex.org/C56683836","wikidata":"https://www.wikidata.org/wiki/Q1886511","display_name":"Macronucleus","level":3,"score":0.7575531005859375},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5305773615837097},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.47816047072410583},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4223908483982086},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.27288806438446045}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-540-92910-9_37","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-92910-9_37","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Handbook of Natural Computing","raw_type":"book-chapter"},{"id":"pmh:oai:documentserver.uhasselt.be:1942/14666","is_oa":true,"landing_page_url":"http://hdl.handle.net/1942/14666","pdf_url":null,"source":{"id":"https://openalex.org/S4306401926","display_name":"Document Server@UHasselt (UHasselt)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I878454856","host_organization_name":"Hasselt University","host_organization_lineage":["https://openalex.org/I878454856"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"}],"best_oa_location":{"id":"pmh:oai:documentserver.uhasselt.be:1942/14666","is_oa":true,"landing_page_url":"http://hdl.handle.net/1942/14666","pdf_url":null,"source":{"id":"https://openalex.org/S4306401926","display_name":"Document Server@UHasselt (UHasselt)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I878454856","host_organization_name":"Hasselt University","host_organization_lineage":["https://openalex.org/I878454856"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":90,"referenced_works":["https://openalex.org/W9092968","https://openalex.org/W81003598","https://openalex.org/W86835110","https://openalex.org/W194493790","https://openalex.org/W1490430289","https://openalex.org/W1502570864","https://openalex.org/W1512335319","https://openalex.org/W1513391222","https://openalex.org/W1527280207","https://openalex.org/W1531284619","https://openalex.org/W1534477878","https://openalex.org/W1534710488","https://openalex.org/W1536047544","https://openalex.org/W1542637289","https://openalex.org/W1562381076","https://openalex.org/W1566861985","https://openalex.org/W1581293085","https://openalex.org/W1586809120","https://openalex.org/W1589993665","https://openalex.org/W1595078586","https://openalex.org/W1602512736","https://openalex.org/W1617520624","https://openalex.org/W1718591406","https://openalex.org/W1822599926","https://openalex.org/W1838041811","https://openalex.org/W1879527074","https://openalex.org/W1912524364","https://openalex.org/W1966824341","https://openalex.org/W1972261306","https://openalex.org/W1979611609","https://openalex.org/W1979909102","https://openalex.org/W1980898595","https://openalex.org/W1981326970","https://openalex.org/W1986665510","https://openalex.org/W1988175546","https://openalex.org/W1992879303","https://openalex.org/W1996114635","https://openalex.org/W1998921931","https://openalex.org/W2002300035","https://openalex.org/W2006908644","https://openalex.org/W2011664512","https://openalex.org/W2019839205","https://openalex.org/W2022692395","https://openalex.org/W2022812364","https://openalex.org/W2023124941","https://openalex.org/W2025100905","https://openalex.org/W2030891787","https://openalex.org/W2036155292","https://openalex.org/W2043643905","https://openalex.org/W2046026042","https://openalex.org/W2048249183","https://openalex.org/W2048483518","https://openalex.org/W2057026163","https://openalex.org/W2058898593","https://openalex.org/W2059996756","https://openalex.org/W2068060515","https://openalex.org/W2069208483","https://openalex.org/W2072316964","https://openalex.org/W2072343802","https://openalex.org/W2073779013","https://openalex.org/W2075788500","https://openalex.org/W2080087756","https://openalex.org/W2081827112","https://openalex.org/W2085202968","https://openalex.org/W2086421997","https://openalex.org/W2088855462","https://openalex.org/W2090660962","https://openalex.org/W2094095429","https://openalex.org/W2096893503","https://openalex.org/W2103582037","https://openalex.org/W2107538318","https://openalex.org/W2109298048","https://openalex.org/W2113328244","https://openalex.org/W2118829552","https://openalex.org/W2120837895","https://openalex.org/W2146998968","https://openalex.org/W2156613167","https://openalex.org/W2159811977","https://openalex.org/W2168918166","https://openalex.org/W2169843344","https://openalex.org/W2370486171","https://openalex.org/W2444273801","https://openalex.org/W2477405540","https://openalex.org/W2487644529","https://openalex.org/W2499594355","https://openalex.org/W2506172604","https://openalex.org/W2689903631","https://openalex.org/W4239877632","https://openalex.org/W4285719527","https://openalex.org/W4285730704"],"related_works":["https://openalex.org/W2005565887","https://openalex.org/W2016478944","https://openalex.org/W2081819718","https://openalex.org/W2404585747","https://openalex.org/W2125986815","https://openalex.org/W2139429813","https://openalex.org/W1970597150","https://openalex.org/W2086526775","https://openalex.org/W2109234767","https://openalex.org/W1985738284"],"abstract_inverted_index":null,"counts_by_year":[{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}