{"id":"https://openalex.org/W2124096367","doi":"https://doi.org/10.1007/978-3-540-87361-7_20","title":"Enumerating Precursor Sets of Target Metabolites in a Metabolic Network","display_name":"Enumerating Precursor Sets of Target Metabolites in a Metabolic Network","publication_year":2008,"publication_date":"2008-01-01","ids":{"openalex":"https://openalex.org/W2124096367","doi":"https://doi.org/10.1007/978-3-540-87361-7_20","mag":"2124096367"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-87361-7_20","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-87361-7_20","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001473736","display_name":"Ludovic Cottret","orcid":"https://orcid.org/0000-0001-7418-7750"},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ludovic Cottret","raw_affiliation_strings":["Projet Helix, INRIA Rh\u00f4ne-Alpes, France","Universit\u00e9 de Lyon, F-69000, Lyon, Universit\u00e9 Lyon 1, CNRS, UMR5558,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Projet Helix, INRIA Rh\u00f4ne-Alpes, France","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"Universit\u00e9 de Lyon, F-69000, Lyon, Universit\u00e9 Lyon 1, CNRS, UMR5558,","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033274444","display_name":"Paulo Vieira Milreu","orcid":null},"institutions":[{"id":"https://openalex.org/I122558511","display_name":"Universidade Federal de Mato Grosso do Sul","ror":"https://ror.org/0366d2847","country_code":"BR","type":"education","lineage":["https://openalex.org/I122558511"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Paulo Vieira Milreu","raw_affiliation_strings":["Universidade Federal de Mato Grosso do Sul,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidade Federal de Mato Grosso do Sul,","institution_ids":["https://openalex.org/I122558511"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106184492","display_name":"Vicente Acu\u00f1a","orcid":null},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Vicente Acu\u00f1a","raw_affiliation_strings":["Projet Helix, INRIA Rh\u00f4ne-Alpes, France","Universit\u00e9 de Lyon, F-69000, Lyon, Universit\u00e9 Lyon 1, CNRS, UMR5558,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Projet Helix, INRIA Rh\u00f4ne-Alpes, France","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"Universit\u00e9 de Lyon, F-69000, Lyon, Universit\u00e9 Lyon 1, CNRS, UMR5558,","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064823807","display_name":"Alberto Marchetti-Spaccamela","orcid":"https://orcid.org/0000-0002-7991-4416"},"institutions":[{"id":"https://openalex.org/I861853513","display_name":"Sapienza University of Rome","ror":"https://ror.org/02be6w209","country_code":"IT","type":"education","lineage":["https://openalex.org/I861853513"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alberto Marchetti-Spaccamela","raw_affiliation_strings":["Sapienza University of Rome,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Sapienza University of Rome,","institution_ids":["https://openalex.org/I861853513"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029158906","display_name":"F\u00e1bio V. Martinez","orcid":"https://orcid.org/0000-0001-6809-3547"},"institutions":[{"id":"https://openalex.org/I122558511","display_name":"Universidade Federal de Mato Grosso do Sul","ror":"https://ror.org/0366d2847","country_code":"BR","type":"education","lineage":["https://openalex.org/I122558511"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"F\u00e1bio Viduani Martinez","raw_affiliation_strings":["Universidade Federal de Mato Grosso do Sul,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidade Federal de Mato Grosso do Sul,","institution_ids":["https://openalex.org/I122558511"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110531794","display_name":"Marie-France Sagot","orcid":null},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marie-France Sagot","raw_affiliation_strings":["Projet Helix, INRIA Rh\u00f4ne-Alpes, France","Universit\u00e9 de Lyon, F-69000, Lyon, Universit\u00e9 Lyon 1, CNRS, UMR5558,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Projet Helix, INRIA Rh\u00f4ne-Alpes, France","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"Universit\u00e9 de Lyon, F-69000, Lyon, Universit\u00e9 Lyon 1, CNRS, UMR5558,","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044184077","display_name":"Leen Stougie","orcid":"https://orcid.org/0000-0001-6938-8902"},"institutions":[{"id":"https://openalex.org/I1341640284","display_name":"Centrum Wiskunde & Informatica","ror":"https://ror.org/00x7ekv49","country_code":"NL","type":"facility","lineage":["https://openalex.org/I1341640284","https://openalex.org/I2800991832","https://openalex.org/I4405262988"]},{"id":"https://openalex.org/I83019370","display_name":"Eindhoven University of Technology","ror":"https://ror.org/02c2kyt77","country_code":"NL","type":"education","lineage":["https://openalex.org/I83019370"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Leen Stougie","raw_affiliation_strings":["Eindhoven University of Technology and CWI, Amsterdam,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Eindhoven University of Technology and CWI, Amsterdam,","institution_ids":["https://openalex.org/I1341640284","https://openalex.org/I83019370"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":7,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":5.386,"has_fulltext":false,"cited_by_count":31,"citation_normalized_percentile":{"value":0.95215628,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"233","last_page":"244"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10404","display_name":"Enzyme Catalysis and Immobilization","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10171","display_name":"Biofuel production and bioconversion","score":0.9908999800682068,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7569366693496704},{"id":"https://openalex.org/keywords/metabolic-network","display_name":"Metabolic network","score":0.70157390832901},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6544221043586731},{"id":"https://openalex.org/keywords/metabolic-pathway","display_name":"Metabolic pathway","score":0.4760458469390869},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.38236260414123535},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.36683911085128784},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.2730521857738495},{"id":"https://openalex.org/keywords/metabolism","display_name":"Metabolism","score":0.19454005360603333},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.16901159286499023},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1309838891029358},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.12629342079162598}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7569366693496704},{"id":"https://openalex.org/C101810790","wikidata":"https://www.wikidata.org/wiki/Q2263094","display_name":"Metabolic network","level":2,"score":0.70157390832901},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6544221043586731},{"id":"https://openalex.org/C192989942","wikidata":"https://www.wikidata.org/wiki/Q68685","display_name":"Metabolic pathway","level":3,"score":0.4760458469390869},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.38236260414123535},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.36683911085128784},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.2730521857738495},{"id":"https://openalex.org/C62231903","wikidata":"https://www.wikidata.org/wiki/Q1057","display_name":"Metabolism","level":2,"score":0.19454005360603333},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.16901159286499023},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1309838891029358},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.12629342079162598},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":7,"locations":[{"id":"doi:10.1007/978-3-540-87361-7_20","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-87361-7_20","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:pure.tue.nl:openaire_cris_publications/097c6327-7080-4d1d-9cbe-27e61e9b0dfb","is_oa":false,"landing_page_url":"https://research.tue.nl/en/publications/097c6327-7080-4d1d-9cbe-27e61e9b0dfb","pdf_url":null,"source":{"id":"https://openalex.org/S4406922641","display_name":"TU/e Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Cottret, L, Vieira Milreu, P, Acu\u00f1a, V, Marchetti Spaccamela, A, Viduani Martinez, F, Sagot, M F & Stougie, L 2008, Enumerating precursor sets of target metabolites in a metabolic network. in K A Crandall & J Lagergren (eds), Algorithms in Bioinformatics (Proceedings 8th International Workshop, WABI 2008, Karlsruhe, Germany, September 15-19, 2008). Lecture Notes in Computer Science, vol. 5151, Springer, Berlin, pp. 233-244. https://doi.org/10.1007/978-3-540-87361-7_20","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:HAL:hal-00428200v1","is_oa":false,"landing_page_url":"https://hal.archives-ouvertes.fr/hal-00428200","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"incollection","raw_type":"\\ninfo:eu-repo/semantics/article\\n"},{"id":"pmh:oai:iris.uniroma1.it:11573/215180","is_oa":false,"landing_page_url":"http://hdl.handle.net/11573/215180","pdf_url":null,"source":{"id":"https://openalex.org/S4377196107","display_name":"IRIS Research product catalog (Sapienza University of Rome)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"},{"id":"pmh:oai:research.vu.nl:openaire_cris_publications/3b6879ef-2ca1-4544-8227-defa211d727e","is_oa":false,"landing_page_url":"https://hdl.handle.net/1871.1/3b6879ef-2ca1-4544-8227-defa211d727e","pdf_url":null,"source":{"id":"https://openalex.org/S4306401107","display_name":"VU Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I865915315","host_organization_name":"Vrije Universiteit Amsterdam","host_organization_lineage":["https://openalex.org/I865915315"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Cortet, L, Milreu, P V, Machetti Spaccamela, A, Stougie, L, Viduani Martinez, F & Sagot, M-F 2008, Enumerating precusor sets of target metabolites in a metabolic network. in K A Crandall (ed.), Proceedings of the 8th International Workshop on Algorithms in Bioinformatics, Lecture Notes in Computer Science, 5151, WABI. Springer Verlag, Berlin, pp. 233-244, 8th Internatiional Workshop on Algorithms in Bioinformatics (WABI), 15/09/08. https://doi.org/10.1007/978-3-540-87361-7_20","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:tue:oai:pure.tue.nl:publications/097c6327-7080-4d1d-9cbe-27e61e9b0dfb","is_oa":false,"landing_page_url":"https://research.tue.nl/nl/publications/097c6327-7080-4d1d-9cbe-27e61e9b0dfb","pdf_url":null,"source":{"id":"https://openalex.org/S4306401843","display_name":"Data Archiving and Networked Services (DANS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1322597698","host_organization_name":"Royal Netherlands Academy of Arts and Sciences","host_organization_lineage":["https://openalex.org/I1322597698"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms in Bioinformatics (Proceedings 8th International Workshop, WABI 2008, Karlsruhe, Germany, September 15-19, 2008), 233 - 244","raw_type":"info:eu-repo/semantics/conferencepaper"},{"id":"pmh:vu:oai:research.vu.nl:publications/3b6879ef-2ca1-4544-8227-defa211d727e","is_oa":false,"landing_page_url":"https://research.vu.nl/en/publications/3b6879ef-2ca1-4544-8227-defa211d727e","pdf_url":null,"source":{"id":"https://openalex.org/S4306401843","display_name":"Data Archiving and Networked Services (DANS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1322597698","host_organization_name":"Royal Netherlands Academy of Arts and Sciences","host_organization_lineage":["https://openalex.org/I1322597698"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proceedings of the 8th International Workshop on Algorithms in Bioinformatics, Lecture Notes in Computer Science, 5151, WABI, 233 - 244","raw_type":"info:eu-repo/semantics/conferencepaper"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":9,"referenced_works":["https://openalex.org/W2011039300","https://openalex.org/W2017065632","https://openalex.org/W2043499324","https://openalex.org/W2057389251","https://openalex.org/W2080229897","https://openalex.org/W2108078368","https://openalex.org/W2110017370","https://openalex.org/W2158784643","https://openalex.org/W2165674132"],"related_works":["https://openalex.org/W1961707331","https://openalex.org/W2341681417","https://openalex.org/W2063475537","https://openalex.org/W2012938657","https://openalex.org/W2096004952","https://openalex.org/W1578136679","https://openalex.org/W2087715585","https://openalex.org/W4223538309","https://openalex.org/W2147962989","https://openalex.org/W4309835295"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":5}],"updated_date":"2026-06-16T09:24:06.705377","created_date":"2025-10-10T00:00:00"}
