{"id":"https://openalex.org/W1593987601","doi":"https://doi.org/10.1007/978-3-540-85072-4_22","title":"An Artificial Immune System for Evolving Amino Acid Clusters Tailored to Protein Function Prediction","display_name":"An Artificial Immune System for Evolving Amino Acid Clusters Tailored to Protein Function Prediction","publication_year":2008,"publication_date":"2008-08-04","ids":{"openalex":"https://openalex.org/W1593987601","doi":"https://doi.org/10.1007/978-3-540-85072-4_22","mag":"1593987601"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-85072-4_22","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-85072-4_22","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061536215","display_name":"Andrew Secker","orcid":null},"institutions":[{"id":"https://openalex.org/I20581793","display_name":"University of Kent","ror":"https://ror.org/00xkeyj56","country_code":"GB","type":"education","lineage":["https://openalex.org/I20581793"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"A. Secker","raw_affiliation_strings":["Computing Laboratory and Centre for BioMedical Informatics, University of Kent, Canterbury, CT2 7NF, UK","Computing Laboratory and Centre for BioMedical Informatics, University of Kent, Canterbury, UK CT2 7NF#TAB#"],"affiliations":[{"raw_affiliation_string":"Computing Laboratory and Centre for BioMedical Informatics, University of Kent, Canterbury, CT2 7NF, UK","institution_ids":["https://openalex.org/I20581793"]},{"raw_affiliation_string":"Computing Laboratory and Centre for BioMedical Informatics, University of Kent, Canterbury, UK CT2 7NF#TAB#","institution_ids":["https://openalex.org/I20581793"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101613652","display_name":"Matthew N Davies","orcid":"https://orcid.org/0000-0003-2294-7839"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I4210153742","display_name":"Jenner Institute","ror":"https://ror.org/05kwhph67","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210153742"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"M. N. Davies","raw_affiliation_strings":["The Jenner Institute, University of Oxford, Compton, Newbury, Berkshire, RG20 7NN, UK","The Jenner Institute, University of Oxford, Compton, Newbury, UK RG20 7NN#TAB#"],"affiliations":[{"raw_affiliation_string":"The Jenner Institute, University of Oxford, Compton, Newbury, Berkshire, RG20 7NN, UK","institution_ids":["https://openalex.org/I4210153742","https://openalex.org/I40120149"]},{"raw_affiliation_string":"The Jenner Institute, University of Oxford, Compton, Newbury, UK RG20 7NN#TAB#","institution_ids":["https://openalex.org/I40120149"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087201377","display_name":"Alex A. Freitas","orcid":"https://orcid.org/0000-0001-9825-4700"},"institutions":[{"id":"https://openalex.org/I20581793","display_name":"University of Kent","ror":"https://ror.org/00xkeyj56","country_code":"GB","type":"education","lineage":["https://openalex.org/I20581793"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"A. A. Freitas","raw_affiliation_strings":["Computing Laboratory and Centre for BioMedical Informatics, University of Kent, Canterbury, CT2 7NF, UK","Computing Laboratory and Centre for BioMedical Informatics, University of Kent, Canterbury, UK CT2 7NF#TAB#"],"affiliations":[{"raw_affiliation_string":"Computing Laboratory and Centre for BioMedical Informatics, University of Kent, Canterbury, CT2 7NF, UK","institution_ids":["https://openalex.org/I20581793"]},{"raw_affiliation_string":"Computing Laboratory and Centre for BioMedical Informatics, University of Kent, Canterbury, UK CT2 7NF#TAB#","institution_ids":["https://openalex.org/I20581793"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080582720","display_name":"Jon Timmis","orcid":"https://orcid.org/0000-0003-1055-0471"},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"J. Timmis","raw_affiliation_strings":["Departments of Computer Science and Electronics, University of York, York, YO10 5DD, UK","Departments of Computer Science and Electronics, University of York, York, UK YO10 5DD#TAB#"],"affiliations":[{"raw_affiliation_string":"Departments of Computer Science and Electronics, University of York, York, YO10 5DD, UK","institution_ids":["https://openalex.org/I52099693"]},{"raw_affiliation_string":"Departments of Computer Science and Electronics, University of York, York, UK YO10 5DD#TAB#","institution_ids":["https://openalex.org/I52099693"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111461727","display_name":"Edward Clark","orcid":null},"institutions":[{"id":"https://openalex.org/I52099693","display_name":"University of York","ror":"https://ror.org/04m01e293","country_code":"GB","type":"education","lineage":["https://openalex.org/I52099693"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"E. Clark","raw_affiliation_strings":["Departments of Computer Science and Electronics, University of York, York, YO10 5DD, UK","Departments of Computer Science and Electronics, University of York, York, UK YO10 5DD#TAB#"],"affiliations":[{"raw_affiliation_string":"Departments of Computer Science and Electronics, University of York, York, YO10 5DD, UK","institution_ids":["https://openalex.org/I52099693"]},{"raw_affiliation_string":"Departments of Computer Science and Electronics, University of York, York, UK YO10 5DD#TAB#","institution_ids":["https://openalex.org/I52099693"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052912254","display_name":"Darren R. Flower","orcid":"https://orcid.org/0000-0002-8542-7067"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]},{"id":"https://openalex.org/I4210153742","display_name":"Jenner Institute","ror":"https://ror.org/05kwhph67","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210153742"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"D. R. Flower","raw_affiliation_strings":["The Jenner Institute, University of Oxford, Compton, Newbury, Berkshire, RG20 7NN, UK","The Jenner Institute, University of Oxford, Compton, Newbury, UK RG20 7NN#TAB#"],"affiliations":[{"raw_affiliation_string":"The Jenner Institute, University of Oxford, Compton, Newbury, Berkshire, RG20 7NN, UK","institution_ids":["https://openalex.org/I4210153742","https://openalex.org/I40120149"]},{"raw_affiliation_string":"The Jenner Institute, University of Oxford, Compton, Newbury, UK RG20 7NN#TAB#","institution_ids":["https://openalex.org/I40120149"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5061536215"],"corresponding_institution_ids":["https://openalex.org/I20581793"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":8.7361,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.97725082,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"242","last_page":"253"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12391","display_name":"Artificial Immune Systems Applications","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12391","display_name":"Artificial Immune Systems Applications","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11171","display_name":"Diabetes and associated disorders","score":0.9884999990463257,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9833999872207642,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.799095630645752},{"id":"https://openalex.org/keywords/protein-function-prediction","display_name":"Protein function prediction","score":0.6598577499389648},{"id":"https://openalex.org/keywords/artificial-immune-system","display_name":"Artificial immune system","score":0.6157665848731995},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5921740531921387},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5738507509231567},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5483168363571167},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.500779390335083},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4764668941497803},{"id":"https://openalex.org/keywords/class","display_name":"Class (philosophy)","score":0.45363104343414307},{"id":"https://openalex.org/keywords/tree-structure","display_name":"Tree structure","score":0.4529288709163666},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.45000672340393066},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4451787769794464},{"id":"https://openalex.org/keywords/protein-function","display_name":"Protein function","score":0.3726534843444824},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.35897016525268555},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3273540735244751},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.20137286186218262},{"id":"https://openalex.org/keywords/binary-tree","display_name":"Binary tree","score":0.1599026322364807},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09011366963386536}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.799095630645752},{"id":"https://openalex.org/C207060522","wikidata":"https://www.wikidata.org/wiki/Q7251473","display_name":"Protein function prediction","level":4,"score":0.6598577499389648},{"id":"https://openalex.org/C93768804","wikidata":"https://www.wikidata.org/wiki/Q2518735","display_name":"Artificial immune system","level":2,"score":0.6157665848731995},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5921740531921387},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5738507509231567},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5483168363571167},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.500779390335083},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4764668941497803},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.45363104343414307},{"id":"https://openalex.org/C163797641","wikidata":"https://www.wikidata.org/wiki/Q2067937","display_name":"Tree structure","level":3,"score":0.4529288709163666},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.45000672340393066},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4451787769794464},{"id":"https://openalex.org/C2986374874","wikidata":"https://www.wikidata.org/wiki/Q8054","display_name":"Protein function","level":3,"score":0.3726534843444824},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.35897016525268555},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3273540735244751},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.20137286186218262},{"id":"https://openalex.org/C197855036","wikidata":"https://www.wikidata.org/wiki/Q380172","display_name":"Binary tree","level":2,"score":0.1599026322364807},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09011366963386536},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-3-540-85072-4_22","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-85072-4_22","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.156.6449","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.156.6449","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www-users.cs.york.ac.uk/~jtimmis/papers/biasproficaris08.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.183.226","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.183.226","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cs.ukc.ac.uk/people/staff/aaf/pub_papers.dir/ICARIS-2008-Secker.pdf","raw_type":"text"},{"id":"pmh:oai:kar.kent.ac.uk:15659","is_oa":false,"landing_page_url":"https://kar.kent.ac.uk/15659/","pdf_url":null,"source":{"id":"https://openalex.org/S4377196264","display_name":"Kent Academic Repository (University of Kent)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20581793","host_organization_name":"University of Kent","host_organization_lineage":["https://openalex.org/I20581793"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Book section"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5862820587","display_name":null,"funder_award_id":"EP/D501377/1","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":23,"referenced_works":["https://openalex.org/W41890578","https://openalex.org/W192749064","https://openalex.org/W768990266","https://openalex.org/W1525048611","https://openalex.org/W1570448133","https://openalex.org/W1580533329","https://openalex.org/W1804670083","https://openalex.org/W1886554846","https://openalex.org/W1974664442","https://openalex.org/W2005462790","https://openalex.org/W2005604222","https://openalex.org/W2091568186","https://openalex.org/W2095775529","https://openalex.org/W2108398740","https://openalex.org/W2114068014","https://openalex.org/W2121847038","https://openalex.org/W2130783152","https://openalex.org/W2139774535","https://openalex.org/W2164934768","https://openalex.org/W2799114752","https://openalex.org/W2966207845","https://openalex.org/W4232082136","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2093885745","https://openalex.org/W2094822546","https://openalex.org/W2351266481","https://openalex.org/W2132547887","https://openalex.org/W2516987005","https://openalex.org/W2907786475","https://openalex.org/W2963447120","https://openalex.org/W1969080446","https://openalex.org/W4388708026","https://openalex.org/W2092152400"],"abstract_inverted_index":null,"counts_by_year":[{"year":2015,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
