{"id":"https://openalex.org/W2117268237","doi":"https://doi.org/10.1007/978-3-540-79992-4_13","title":"Stabilizing and Destabilizing Effects of Embedding 3-Node Subgraphs on the State Space of Boolean Networks","display_name":"Stabilizing and Destabilizing Effects of Embedding 3-Node Subgraphs on the State Space of Boolean Networks","publication_year":2008,"publication_date":"2008-01-01","ids":{"openalex":"https://openalex.org/W2117268237","doi":"https://doi.org/10.1007/978-3-540-79992-4_13","mag":"2117268237"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-79992-4_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-79992-4_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070507350","display_name":"Chikoo Oosawa","orcid":"https://orcid.org/0009-0007-8824-5465"},"institutions":[{"id":"https://openalex.org/I207014233","display_name":"Kyushu Institute of Technology","ror":"https://ror.org/02278tr80","country_code":"JP","type":"education","lineage":["https://openalex.org/I207014233"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Chikoo Oosawa","raw_affiliation_strings":["Department of Bioscience and Bioinformatics, Kyushu Institute of Technology, Fukuoka, Japan","Department of Bioscience and Bioinformatics Kyushu Institute of Technology Fukuoka Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioscience and Bioinformatics, Kyushu Institute of Technology, Fukuoka, Japan","institution_ids":["https://openalex.org/I207014233"]},{"raw_affiliation_string":"Department of Bioscience and Bioinformatics Kyushu Institute of Technology Fukuoka Japan","institution_ids":["https://openalex.org/I207014233"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037370047","display_name":"Michael A. Savageau","orcid":"https://orcid.org/0009-0003-5484-6538"},"institutions":[{"id":"https://openalex.org/I84218800","display_name":"University of California, Davis","ror":"https://ror.org/05rrcem69","country_code":"US","type":"education","lineage":["https://openalex.org/I84218800"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael A. Savageau","raw_affiliation_strings":["Department of Biomedical Engineering, University of California, Davis, USA","Department of Biomedical Engineering, University of California-Davis, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, University of California, Davis, USA","institution_ids":["https://openalex.org/I84218800"]},{"raw_affiliation_string":"Department of Biomedical Engineering, University of California-Davis, USA","institution_ids":["https://openalex.org/I84218800"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083154892","display_name":"Abdul Salam Jarrah","orcid":"https://orcid.org/0000-0001-6771-2561"},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Abdul S. Jarrah","raw_affiliation_strings":["Virginia Bioinformatics Institute, Department of Mathematics, Virginia Polytechnic Institute and State University, Virginia, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Bioinformatics Institute, Department of Mathematics, Virginia Polytechnic Institute and State University, Virginia, USA","institution_ids":["https://openalex.org/I859038795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091010756","display_name":"Reinhard Laubenbacher","orcid":"https://orcid.org/0000-0002-9143-9451"},"institutions":[{"id":"https://openalex.org/I859038795","display_name":"Virginia Tech","ror":"https://ror.org/02smfhw86","country_code":"US","type":"education","lineage":["https://openalex.org/I859038795"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Reinhard C. Laubenbacher","raw_affiliation_strings":["Virginia Bioinformatics Institute, Department of Mathematics, Virginia Polytechnic Institute and State University, Virginia, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virginia Bioinformatics Institute, Department of Mathematics, Virginia Polytechnic Institute and State University, Virginia, USA","institution_ids":["https://openalex.org/I859038795"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068753451","display_name":"Eduardo D. Sontag","orcid":"https://orcid.org/0000-0001-8020-5783"},"institutions":[{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eduardo D. Sontag","raw_affiliation_strings":["Department of Mathematics, Rutgers, The State University of New Jersey, New Jersey, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics, Rutgers, The State University of New Jersey, New Jersey, USA","institution_ids":["https://openalex.org/I102322142"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"100","last_page":"107"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9811000227928162,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9757999777793884,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7745798826217651},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.7233396172523499},{"id":"https://openalex.org/keywords/node","display_name":"Node (physics)","score":0.589331865310669},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.5445017218589783},{"id":"https://openalex.org/keywords/state","display_name":"State (computer science)","score":0.5271033048629761},{"id":"https://openalex.org/keywords/boolean-function","display_name":"Boolean function","score":0.5202792286872864},{"id":"https://openalex.org/keywords/and-inverter-graph","display_name":"And-inverter graph","score":0.512855052947998},{"id":"https://openalex.org/keywords/space","display_name":"Space (punctuation)","score":0.5087550282478333},{"id":"https://openalex.org/keywords/state-space","display_name":"State space","score":0.5045491456985474},{"id":"https://openalex.org/keywords/boolean-network","display_name":"Boolean network","score":0.4850849211215973},{"id":"https://openalex.org/keywords/discrete-mathematics","display_name":"Discrete mathematics","score":0.3248634338378906},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.2930578589439392},{"id":"https://openalex.org/keywords/boolean-circuit","display_name":"Boolean circuit","score":0.19958284497261047},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.16749972105026245},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.16008320450782776},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.06238642334938049}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7745798826217651},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.7233396172523499},{"id":"https://openalex.org/C62611344","wikidata":"https://www.wikidata.org/wiki/Q1062658","display_name":"Node (physics)","level":2,"score":0.589331865310669},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.5445017218589783},{"id":"https://openalex.org/C48103436","wikidata":"https://www.wikidata.org/wiki/Q599031","display_name":"State (computer science)","level":2,"score":0.5271033048629761},{"id":"https://openalex.org/C187455244","wikidata":"https://www.wikidata.org/wiki/Q942353","display_name":"Boolean function","level":2,"score":0.5202792286872864},{"id":"https://openalex.org/C196836630","wikidata":"https://www.wikidata.org/wiki/Q4753279","display_name":"And-inverter graph","level":4,"score":0.512855052947998},{"id":"https://openalex.org/C2778572836","wikidata":"https://www.wikidata.org/wiki/Q380933","display_name":"Space (punctuation)","level":2,"score":0.5087550282478333},{"id":"https://openalex.org/C72434380","wikidata":"https://www.wikidata.org/wiki/Q230930","display_name":"State space","level":2,"score":0.5045491456985474},{"id":"https://openalex.org/C134444547","wikidata":"https://www.wikidata.org/wiki/Q585230","display_name":"Boolean network","level":3,"score":0.4850849211215973},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.3248634338378906},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.2930578589439392},{"id":"https://openalex.org/C141796577","wikidata":"https://www.wikidata.org/wiki/Q837479","display_name":"Boolean circuit","level":3,"score":0.19958284497261047},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.16749972105026245},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.16008320450782776},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.06238642334938049},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-79992-4_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-79992-4_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W77432724","https://openalex.org/W120264976","https://openalex.org/W1746989621","https://openalex.org/W1965869439","https://openalex.org/W2005486846","https://openalex.org/W2010689735","https://openalex.org/W2016382979","https://openalex.org/W2016743875","https://openalex.org/W2017798312","https://openalex.org/W2029728812","https://openalex.org/W2044931949","https://openalex.org/W2105291362","https://openalex.org/W2109110326","https://openalex.org/W2145198449","https://openalex.org/W2147824439","https://openalex.org/W2148061480","https://openalex.org/W2153624566","https://openalex.org/W2155408323","https://openalex.org/W2163480486","https://openalex.org/W2165641442","https://openalex.org/W2528271650","https://openalex.org/W2962689126"],"related_works":["https://openalex.org/W2105128170","https://openalex.org/W3141532631","https://openalex.org/W2131164334","https://openalex.org/W2735125071","https://openalex.org/W2995277268","https://openalex.org/W2246807618","https://openalex.org/W2495550620","https://openalex.org/W1991822629","https://openalex.org/W2290177525","https://openalex.org/W2064457754"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
