{"id":"https://openalex.org/W1490574280","doi":"https://doi.org/10.1007/978-3-540-76931-6_14","title":"An Integrated QAP-Based Approach to Visualize Patterns of Gene Expression Similarity","display_name":"An Integrated QAP-Based Approach to Visualize Patterns of Gene Expression Similarity","publication_year":2007,"publication_date":"2007-11-05","ids":{"openalex":"https://openalex.org/W1490574280","doi":"https://doi.org/10.1007/978-3-540-76931-6_14","mag":"1490574280"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-76931-6_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-76931-6_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":null,"any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005828423","display_name":"Mario Inostroza-Ponta","orcid":"https://orcid.org/0000-0003-1295-8972"},"institutions":[{"id":"https://openalex.org/I78757542","display_name":"University of Newcastle Australia","ror":"https://ror.org/00eae9z71","country_code":"AU","type":"education","lineage":["https://openalex.org/I78757542"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Mario Inostroza-Ponta","raw_affiliation_strings":["Centre for Bioinformatics, Biomarker Discovery and Information-based Medicine, The University of Newcastle, Callaghan, NSW, 2308, Australia","Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, NSW, Australia"],"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, Biomarker Discovery and Information-based Medicine, The University of Newcastle, Callaghan, NSW, 2308, Australia","institution_ids":["https://openalex.org/I78757542"]},{"raw_affiliation_string":"Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, NSW, Australia","institution_ids":["https://openalex.org/I78757542"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011447378","display_name":"Alexandre Mendes","orcid":"https://orcid.org/0000-0003-1759-3765"},"institutions":[{"id":"https://openalex.org/I78757542","display_name":"University of Newcastle Australia","ror":"https://ror.org/00eae9z71","country_code":"AU","type":"education","lineage":["https://openalex.org/I78757542"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Alexandre Mendes","raw_affiliation_strings":["Centre for Bioinformatics, Biomarker Discovery and Information-based Medicine, The University of Newcastle, Callaghan, NSW, 2308, Australia","Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, NSW, Australia"],"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, Biomarker Discovery and Information-based Medicine, The University of Newcastle, Callaghan, NSW, 2308, Australia","institution_ids":["https://openalex.org/I78757542"]},{"raw_affiliation_string":"Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, NSW, Australia","institution_ids":["https://openalex.org/I78757542"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026652518","display_name":"Regina Berretta","orcid":"https://orcid.org/0000-0002-4420-3446"},"institutions":[{"id":"https://openalex.org/I78757542","display_name":"University of Newcastle Australia","ror":"https://ror.org/00eae9z71","country_code":"AU","type":"education","lineage":["https://openalex.org/I78757542"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Regina Berretta","raw_affiliation_strings":["Centre for Bioinformatics, Biomarker Discovery and Information-based Medicine, The University of Newcastle, Callaghan, NSW, 2308, Australia","Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, NSW, Australia"],"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, Biomarker Discovery and Information-based Medicine, The University of Newcastle, Callaghan, NSW, 2308, Australia","institution_ids":["https://openalex.org/I78757542"]},{"raw_affiliation_string":"Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, NSW, Australia","institution_ids":["https://openalex.org/I78757542"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041229487","display_name":"Pablo Moscato","orcid":"https://orcid.org/0000-0003-2570-5966"},"institutions":[{"id":"https://openalex.org/I78757542","display_name":"University of Newcastle Australia","ror":"https://ror.org/00eae9z71","country_code":"AU","type":"education","lineage":["https://openalex.org/I78757542"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Pablo Moscato","raw_affiliation_strings":["Centre for Bioinformatics, Biomarker Discovery and Information-based Medicine, The University of Newcastle, Callaghan, NSW, 2308, Australia","Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, NSW, Australia"],"affiliations":[{"raw_affiliation_string":"Centre for Bioinformatics, Biomarker Discovery and Information-based Medicine, The University of Newcastle, Callaghan, NSW, 2308, Australia","institution_ids":["https://openalex.org/I78757542"]},{"raw_affiliation_string":"Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine, The University of Newcastle, Callaghan, NSW, Australia","institution_ids":["https://openalex.org/I78757542"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5005828423"],"corresponding_institution_ids":["https://openalex.org/I78757542"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.0961,"has_fulltext":false,"cited_by_count":20,"citation_normalized_percentile":{"value":0.78748818,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"156","last_page":"167"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.7373879551887512},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7236969470977783},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.6459137797355652},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6109057664871216},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.6003432869911194},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5386950373649597},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.42681849002838135},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.41196519136428833},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.26208826899528503},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.19650572538375854},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.18881386518478394},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13908526301383972},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.1325232982635498},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.09466087818145752},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.07799240946769714}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.7373879551887512},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7236969470977783},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.6459137797355652},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6109057664871216},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.6003432869911194},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5386950373649597},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.42681849002838135},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.41196519136428833},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.26208826899528503},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.19650572538375854},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.18881386518478394},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13908526301383972},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.1325232982635498},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09466087818145752},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.07799240946769714}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1007/978-3-540-76931-6_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-76931-6_14","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.713.2261","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.713.2261","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cs.newcastle.edu.au/%7Emendes/papers/ACAL-07.pdf","raw_type":"text"},{"id":"pmh:oai:figshare.com:article/29001503","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Conference contribution"},{"id":"pmh:uon:2828","is_oa":false,"landing_page_url":"http://hdl.handle.net/1959.13/31816","pdf_url":null,"source":{"id":"https://openalex.org/S4377196471","display_name":"NOVA (University of Newcastle Australia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I78757542","host_organization_name":"University of Newcastle Australia","host_organization_lineage":["https://openalex.org/I78757542"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"conference paper"},{"id":"pmh:uon:9259","is_oa":false,"landing_page_url":"http://hdl.handle.net/1959.13/921171","pdf_url":null,"source":{"id":"https://openalex.org/S4377196471","display_name":"NOVA (University of Newcastle Australia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I78757542","host_organization_name":"University of Newcastle Australia","host_organization_lineage":["https://openalex.org/I78757542"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"conference paper"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/29001503","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Conference contribution"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1493120318","https://openalex.org/W1563291122","https://openalex.org/W1607203124","https://openalex.org/W1852055750","https://openalex.org/W1971700807","https://openalex.org/W1977189366","https://openalex.org/W2084512390","https://openalex.org/W2109619915","https://openalex.org/W2135000328","https://openalex.org/W2135187880","https://openalex.org/W2140863273","https://openalex.org/W2149194035","https://openalex.org/W2150926065","https://openalex.org/W2159675211","https://openalex.org/W2171103562","https://openalex.org/W2895284333"],"related_works":["https://openalex.org/W2013728941","https://openalex.org/W4225274103","https://openalex.org/W2154046714","https://openalex.org/W2189613078","https://openalex.org/W2579659702","https://openalex.org/W2923661510","https://openalex.org/W1574055964","https://openalex.org/W1965329638","https://openalex.org/W2542318691","https://openalex.org/W3160708108"],"abstract_inverted_index":null,"counts_by_year":[{"year":2019,"cited_by_count":4},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":5},{"year":2012,"cited_by_count":2}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
