{"id":"https://openalex.org/W1517762194","doi":"https://doi.org/10.1007/978-3-540-74972-1_46","title":"SeqTrim \u2014 A Validation and Trimming Tool for All Purpose Sequence Reads","display_name":"SeqTrim \u2014 A Validation and Trimming Tool for All Purpose Sequence Reads","publication_year":2007,"publication_date":"2007-01-01","ids":{"openalex":"https://openalex.org/W1517762194","doi":"https://doi.org/10.1007/978-3-540-74972-1_46","mag":"1517762194"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-74972-1_46","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-74972-1_46","pdf_url":null,"source":{"id":"https://openalex.org/S4210208846","display_name":"Advances in intelligent and soft computing","issn_l":"1867-5662","issn":["1867-5662","1867-5670"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Soft Computing","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5011828654","display_name":"Juan Falgueras","orcid":"https://orcid.org/0000-0002-5007-5911"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]},{"id":"https://openalex.org/I6585545","display_name":"European Telecommunications Standards Institute","ror":"https://ror.org/00pwny267","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I6585545"]}],"countries":["ES","FR"],"is_corresponding":true,"raw_author_name":"Juan Falgueras","raw_affiliation_strings":["Lenguajes y Ciencias de la Computaci\u00f3n, ETSI Inform\u00e1tica, Campus Universitario de Teatinos, s/n., E-29071, M\u00e1laga, Spain","Lenguajes y Ciencias de la Computaci\u00f3n, ETSI Inform\u00e1tica"],"affiliations":[{"raw_affiliation_string":"Lenguajes y Ciencias de la Computaci\u00f3n, ETSI Inform\u00e1tica, Campus Universitario de Teatinos, s/n., E-29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I82767444"]},{"raw_affiliation_string":"Lenguajes y Ciencias de la Computaci\u00f3n, ETSI Inform\u00e1tica","institution_ids":["https://openalex.org/I6585545"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102052893","display_name":"Antonio J. Lara","orcid":null},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Antonio J. Lara","raw_affiliation_strings":["Biolog\u00eda Molecular y Bioqu\u00edmica, Universidad de M\u00e1laga, Campus Universitario de Teatinos, s/n., E-29071, M\u00e1laga, Spain","Universidad de Malaga#TAB#"],"affiliations":[{"raw_affiliation_string":"Biolog\u00eda Molecular y Bioqu\u00edmica, Universidad de M\u00e1laga, Campus Universitario de Teatinos, s/n., E-29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I82767444"]},{"raw_affiliation_string":"Universidad de Malaga#TAB#","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026821618","display_name":"Francisco R. Cant\u00f3n","orcid":"https://orcid.org/0000-0001-6917-8630"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Francisco R. Cant\u00f3n","raw_affiliation_strings":["Biolog\u00eda Molecular y Bioqu\u00edmica, Universidad de M\u00e1laga, Campus Universitario de Teatinos, s/n., E-29071, M\u00e1laga, Spain","Universidad de Malaga#TAB#"],"affiliations":[{"raw_affiliation_string":"Biolog\u00eda Molecular y Bioqu\u00edmica, Universidad de M\u00e1laga, Campus Universitario de Teatinos, s/n., E-29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I82767444"]},{"raw_affiliation_string":"Universidad de Malaga#TAB#","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047635872","display_name":"Guillermo P\u00e9rez-Trabado","orcid":"https://orcid.org/0000-0001-7567-9677"},"institutions":[{"id":"https://openalex.org/I6585545","display_name":"European Telecommunications Standards Institute","ror":"https://ror.org/00pwny267","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I6585545"]},{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES","FR"],"is_corresponding":false,"raw_author_name":"Guillermo P\u00e9rez-Trabado","raw_affiliation_strings":["Arquitectura de Computadores, ETSI Inform\u00e1tica, Campus de Teatinos, E-29071, M\u00e1laga, Spain","ETSI Inform\u00e1tica"],"affiliations":[{"raw_affiliation_string":"Arquitectura de Computadores, ETSI Inform\u00e1tica, Campus de Teatinos, E-29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I82767444"]},{"raw_affiliation_string":"ETSI Inform\u00e1tica","institution_ids":["https://openalex.org/I6585545"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056017872","display_name":"M. Gonzalo Claros","orcid":"https://orcid.org/0000-0002-0112-3550"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"M. Gonzalo Claros","raw_affiliation_strings":["Departamento de Biolog\u00eda Molecular y Bioqu\u00edmica, Facultad de Ciencias Universidad de M\u00e1laga, 29071, M\u00e1laga, Spain","Facultad de Ciencias, Universidad de Malaga"],"affiliations":[{"raw_affiliation_string":"Departamento de Biolog\u00eda Molecular y Bioqu\u00edmica, Facultad de Ciencias Universidad de M\u00e1laga, 29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I82767444"]},{"raw_affiliation_string":"Facultad de Ciencias, Universidad de Malaga","institution_ids":["https://openalex.org/I82767444"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5011828654"],"corresponding_institution_ids":["https://openalex.org/I6585545","https://openalex.org/I82767444"],"apc_list":null,"apc_paid":null,"fwci":1.0971,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.78931088,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"353","last_page":"360"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.984499990940094,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9781000018119812,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.7317431569099426},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.655677318572998},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.6524857878684998},{"id":"https://openalex.org/keywords/insert","display_name":"Insert (composites)","score":0.6207134127616882},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6044579744338989},{"id":"https://openalex.org/keywords/trimming","display_name":"Trimming","score":0.5757806301116943},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5335023403167725},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4662937521934509},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.4372245669364929},{"id":"https://openalex.org/keywords/cloning","display_name":"Cloning (programming)","score":0.43125808238983154},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3272362947463989},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2991543710231781},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.22023746371269226},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.18444281816482544},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1663925051689148},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10033571720123291}],"concepts":[{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.7317431569099426},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.655677318572998},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.6524857878684998},{"id":"https://openalex.org/C2780098074","wikidata":"https://www.wikidata.org/wiki/Q6037362","display_name":"Insert (composites)","level":2,"score":0.6207134127616882},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6044579744338989},{"id":"https://openalex.org/C56951928","wikidata":"https://www.wikidata.org/wiki/Q3539213","display_name":"Trimming","level":2,"score":0.5757806301116943},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5335023403167725},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4662937521934509},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.4372245669364929},{"id":"https://openalex.org/C121050878","wikidata":"https://www.wikidata.org/wiki/Q5135020","display_name":"Cloning (programming)","level":2,"score":0.43125808238983154},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3272362947463989},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2991543710231781},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.22023746371269226},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.18444281816482544},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1663925051689148},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10033571720123291},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-74972-1_46","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-74972-1_46","pdf_url":null,"source":{"id":"https://openalex.org/S4210208846","display_name":"Advances in intelligent and soft computing","issn_l":"1867-5662","issn":["1867-5662","1867-5670"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advances in Soft Computing","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":13,"referenced_works":["https://openalex.org/W114797723","https://openalex.org/W1839674003","https://openalex.org/W1985726486","https://openalex.org/W2035483212","https://openalex.org/W2055043387","https://openalex.org/W2073497058","https://openalex.org/W2119923823","https://openalex.org/W2121016876","https://openalex.org/W2140770632","https://openalex.org/W2149585737","https://openalex.org/W2153211479","https://openalex.org/W2164075646","https://openalex.org/W2166265186"],"related_works":["https://openalex.org/W2467235537","https://openalex.org/W4243755427","https://openalex.org/W1493074871","https://openalex.org/W2222099502","https://openalex.org/W2128287377","https://openalex.org/W1979067309","https://openalex.org/W2375590729","https://openalex.org/W2385024427","https://openalex.org/W2978797270","https://openalex.org/W1972676838"],"abstract_inverted_index":null,"counts_by_year":[{"year":2015,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
