{"id":"https://openalex.org/W1768190276","doi":"https://doi.org/10.1007/978-3-540-73920-3_11","title":"Discovery of Genetic Networks Through Abduction and Qualitative Simulation","display_name":"Discovery of Genetic Networks Through Abduction and Qualitative Simulation","publication_year":2007,"publication_date":"2007-08-23","ids":{"openalex":"https://openalex.org/W1768190276","doi":"https://doi.org/10.1007/978-3-540-73920-3_11","mag":"1768190276"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-73920-3_11","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-73920-3_11","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073792028","display_name":"Bla\u017e Zupan","orcid":"https://orcid.org/0000-0002-5864-7056"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]},{"id":"https://openalex.org/I157394403","display_name":"Baylor University","ror":"https://ror.org/005781934","country_code":"US","type":"education","lineage":["https://openalex.org/I157394403"]},{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["SI","US"],"is_corresponding":false,"raw_author_name":"Bla\u017e Zupan","raw_affiliation_strings":["Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia","Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, USA","Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia and Department of Biochemistry and Molecular Biology, Baylor College of Medicine,  "],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia and Department of Biochemistry and Molecular Biology, Baylor College of Medicine,  ","institution_ids":["https://openalex.org/I157394403"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020641117","display_name":"Ivan Bratko","orcid":"https://orcid.org/0000-0002-3658-6555"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]},{"id":"https://openalex.org/I3006985408","display_name":"Jo\u017eef Stefan Institute","ror":"https://ror.org/05060sz93","country_code":"SI","type":"facility","lineage":["https://openalex.org/I3006985408"]},{"id":"https://openalex.org/I4210113529","display_name":"Jo\u017eef Stefan International Postgraduate School","ror":"https://ror.org/01hdkb925","country_code":"SI","type":"education","lineage":["https://openalex.org/I4210113529"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Ivan Bratko","raw_affiliation_strings":["Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia","Department of Intelligent Systems, Jo\u017eef Stefan Institute, Ljubljana, Slovenia","Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia and Department of Intelligent Systems, Jo\u017eef Stefan Institute, Ljubljana, Slo "],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"Department of Intelligent Systems, Jo\u017eef Stefan Institute, Ljubljana, Slovenia","institution_ids":["https://openalex.org/I3006985408"]},{"raw_affiliation_string":"Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia and Department of Intelligent Systems, Jo\u017eef Stefan Institute, Ljubljana, Slo ","institution_ids":["https://openalex.org/I3006985408","https://openalex.org/I4210113529"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024075429","display_name":"Janez Dem\u0161ar","orcid":"https://orcid.org/0000-0002-1256-1687"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Janez Dem\u0161ar","raw_affiliation_strings":["Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia","Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia#TAB#","institution_ids":["https://openalex.org/I153976015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037192671","display_name":"Peter Juvan","orcid":"https://orcid.org/0000-0003-2873-5247"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Peter Juvan","raw_affiliation_strings":["Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia","Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"Artificial Inteligence Laboratory, Faculty of Computer and Information Science, University of Ljubljana, Slovenia#TAB#","institution_ids":["https://openalex.org/I153976015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029971514","display_name":"Adam Kuspa","orcid":"https://orcid.org/0000-0002-9156-149X"},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Adam Kuspa","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, USA","Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA","Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, USA and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, USA and Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA#TAB#","institution_ids":["https://openalex.org/I181547552"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110903369","display_name":"J.A. Halter","orcid":null},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John A. Halter","raw_affiliation_strings":["PM&R and Division of Neuroscience, Baylor College of Medicine, Houston, Texas, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"PM&R and Division of Neuroscience, Baylor College of Medicine, Houston, Texas, USA","institution_ids":["https://openalex.org/I181547552"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055034051","display_name":"Gad Shaulsky","orcid":"https://orcid.org/0000-0002-0532-0551"},"institutions":[{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gad Shaulsky","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, USA","Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas USA","institution_ids":["https://openalex.org/I181547552"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":2.4786,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.87509327,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"228","last_page":"247"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7663602232933044},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6262639164924622},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.5910332202911377},{"id":"https://openalex.org/keywords/prolog","display_name":"Prolog","score":0.5756040811538696},{"id":"https://openalex.org/keywords/outcome","display_name":"Outcome (game theory)","score":0.5588226914405823},{"id":"https://openalex.org/keywords/constraint","display_name":"Constraint (computer-aided design)","score":0.5513100028038025},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5170015096664429},{"id":"https://openalex.org/keywords/constraint-satisfaction","display_name":"Constraint satisfaction","score":0.4787170886993408},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4617813229560852},{"id":"https://openalex.org/keywords/dictyostelium-discoideum","display_name":"Dictyostelium discoideum","score":0.4479290843009949},{"id":"https://openalex.org/keywords/genetic-algorithm","display_name":"Genetic algorithm","score":0.44317346811294556},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.4410703480243683},{"id":"https://openalex.org/keywords/constraint-satisfaction-problem","display_name":"Constraint satisfaction problem","score":0.4410059154033661},{"id":"https://openalex.org/keywords/abductive-reasoning","display_name":"Abductive reasoning","score":0.43915510177612305},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4105178713798523},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.19430536031723022},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.14442405104637146},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12383225560188293},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.10614234209060669},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07876530289649963}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7663602232933044},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6262639164924622},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.5910332202911377},{"id":"https://openalex.org/C81721847","wikidata":"https://www.wikidata.org/wiki/Q163468","display_name":"Prolog","level":2,"score":0.5756040811538696},{"id":"https://openalex.org/C148220186","wikidata":"https://www.wikidata.org/wiki/Q7111912","display_name":"Outcome (game theory)","level":2,"score":0.5588226914405823},{"id":"https://openalex.org/C2776036281","wikidata":"https://www.wikidata.org/wiki/Q48769818","display_name":"Constraint (computer-aided design)","level":2,"score":0.5513100028038025},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5170015096664429},{"id":"https://openalex.org/C44616089","wikidata":"https://www.wikidata.org/wiki/Q30158686","display_name":"Constraint satisfaction","level":3,"score":0.4787170886993408},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4617813229560852},{"id":"https://openalex.org/C2775969001","wikidata":"https://www.wikidata.org/wiki/Q134351","display_name":"Dictyostelium discoideum","level":3,"score":0.4479290843009949},{"id":"https://openalex.org/C8880873","wikidata":"https://www.wikidata.org/wiki/Q187787","display_name":"Genetic algorithm","level":2,"score":0.44317346811294556},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.4410703480243683},{"id":"https://openalex.org/C199622910","wikidata":"https://www.wikidata.org/wiki/Q1128326","display_name":"Constraint satisfaction problem","level":3,"score":0.4410059154033661},{"id":"https://openalex.org/C166088908","wikidata":"https://www.wikidata.org/wiki/Q308495","display_name":"Abductive reasoning","level":2,"score":0.43915510177612305},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4105178713798523},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.19430536031723022},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.14442405104637146},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12383225560188293},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.10614234209060669},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07876530289649963},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.0},{"id":"https://openalex.org/C144237770","wikidata":"https://www.wikidata.org/wiki/Q747534","display_name":"Mathematical economics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-73920-3_11","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-73920-3_11","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W155535615","https://openalex.org/W1510555031","https://openalex.org/W1512750313","https://openalex.org/W1523712082","https://openalex.org/W1658092509","https://openalex.org/W1784944639","https://openalex.org/W1982195409","https://openalex.org/W2015780800","https://openalex.org/W2021337406","https://openalex.org/W2081267709","https://openalex.org/W2082624222","https://openalex.org/W2084106399","https://openalex.org/W2084377907","https://openalex.org/W2117417610","https://openalex.org/W2140812562","https://openalex.org/W2140948740","https://openalex.org/W2146264532","https://openalex.org/W2169690805","https://openalex.org/W2394625668","https://openalex.org/W2611370172","https://openalex.org/W2924068956"],"related_works":["https://openalex.org/W2252314269","https://openalex.org/W2161128834","https://openalex.org/W2091348864","https://openalex.org/W2569549435","https://openalex.org/W2097415053","https://openalex.org/W2012141606","https://openalex.org/W1550482496","https://openalex.org/W2784687883","https://openalex.org/W2102858635","https://openalex.org/W2012694101"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2026-08-04T08:18:43.703281","created_date":"2025-10-10T00:00:00"}
