{"id":"https://openalex.org/W1593939953","doi":"https://doi.org/10.1007/978-3-540-73731-5_17","title":"Genetic Algorithm for Finding Multiple Low Energy Conformations of Poly Alanine Sequences Under an Atomistic Protein Model","display_name":"Genetic Algorithm for Finding Multiple Low Energy Conformations of Poly Alanine Sequences Under an Atomistic Protein Model","publication_year":2007,"publication_date":"2007-08-13","ids":{"openalex":"https://openalex.org/W1593939953","doi":"https://doi.org/10.1007/978-3-540-73731-5_17","mag":"1593939953"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-73731-5_17","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-73731-5_17","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020129323","display_name":"F\u00e1bio Lima Cust\u00f3dio","orcid":"https://orcid.org/0000-0001-5134-2340"},"institutions":[{"id":"https://openalex.org/I4210142352","display_name":"Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica","ror":"https://ror.org/0498ekt05","country_code":"BR","type":"government","lineage":["https://openalex.org/I4210142352"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"F\u00e1bio L. Cust\u00f3dio","raw_affiliation_strings":["Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica, Av. Get\u00falio Vargas, 333, 25651-070, Petr\u00f3polis, RJ, Brazil","Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica, Petr\u00f3polis, RJ, Brazil#TAB#"],"affiliations":[{"raw_affiliation_string":"Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica, Av. Get\u00falio Vargas, 333, 25651-070, Petr\u00f3polis, RJ, Brazil","institution_ids":["https://openalex.org/I4210142352"]},{"raw_affiliation_string":"Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica, Petr\u00f3polis, RJ, Brazil#TAB#","institution_ids":["https://openalex.org/I4210142352"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052002490","display_name":"H\u00e9lio J. C. Barbosa","orcid":"https://orcid.org/0000-0001-5810-7554"},"institutions":[{"id":"https://openalex.org/I4210142352","display_name":"Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica","ror":"https://ror.org/0498ekt05","country_code":"BR","type":"government","lineage":["https://openalex.org/I4210142352"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"H\u00e9lio J. C. Barbosa","raw_affiliation_strings":["Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica, Av. Get\u00falio Vargas, 333, 25651-070, Petr\u00f3polis, RJ, Brazil","Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica, Petr\u00f3polis, RJ, Brazil#TAB#"],"affiliations":[{"raw_affiliation_string":"Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica, Av. Get\u00falio Vargas, 333, 25651-070, Petr\u00f3polis, RJ, Brazil","institution_ids":["https://openalex.org/I4210142352"]},{"raw_affiliation_string":"Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica, Petr\u00f3polis, RJ, Brazil#TAB#","institution_ids":["https://openalex.org/I4210142352"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084969079","display_name":"Laurent E. Dardenne","orcid":"https://orcid.org/0000-0001-8518-8062"},"institutions":[{"id":"https://openalex.org/I4210142352","display_name":"Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica","ror":"https://ror.org/0498ekt05","country_code":"BR","type":"government","lineage":["https://openalex.org/I4210142352"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Laurent E. Dardenne","raw_affiliation_strings":["Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica, Av. Get\u00falio Vargas, 333, 25651-070, Petr\u00f3polis, RJ, Brazil","Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica, Petr\u00f3polis, RJ, Brazil#TAB#"],"affiliations":[{"raw_affiliation_string":"Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica, Av. Get\u00falio Vargas, 333, 25651-070, Petr\u00f3polis, RJ, Brazil","institution_ids":["https://openalex.org/I4210142352"]},{"raw_affiliation_string":"Laborat\u00f3rio Nacional de Computa\u00e7\u00e3o Cient\u00edfica, Petr\u00f3polis, RJ, Brazil#TAB#","institution_ids":["https://openalex.org/I4210142352"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5020129323"],"corresponding_institution_ids":["https://openalex.org/I4210142352"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.5485,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.71146245,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"163","last_page":"166"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/force-field","display_name":"Force field (fiction)","score":0.6308225989341736},{"id":"https://openalex.org/keywords/energy","display_name":"Energy (signal processing)","score":0.5538003444671631},{"id":"https://openalex.org/keywords/alanine","display_name":"Alanine","score":0.5362483859062195},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.48979878425598145},{"id":"https://openalex.org/keywords/genetic-algorithm","display_name":"Genetic algorithm","score":0.45570430159568787},{"id":"https://openalex.org/keywords/helix","display_name":"Helix (gastropod)","score":0.44549843668937683},{"id":"https://openalex.org/keywords/potential-energy","display_name":"Potential energy","score":0.4243188202381134},{"id":"https://openalex.org/keywords/alpha-helix","display_name":"Alpha helix","score":0.4213348627090454},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.41738027334213257},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.4145486354827881},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.4095749855041504},{"id":"https://openalex.org/keywords/crystallography","display_name":"Crystallography","score":0.347248911857605},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.31403517723083496},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.2997221350669861},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.28876394033432007},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.23047110438346863},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15893393754959106},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.14011871814727783},{"id":"https://openalex.org/keywords/atomic-physics","display_name":"Atomic physics","score":0.1399567425251007},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.11669537425041199},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.09568995237350464},{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.09514981508255005},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.08188357949256897},{"id":"https://openalex.org/keywords/pure-mathematics","display_name":"Pure mathematics","score":0.07117384672164917}],"concepts":[{"id":"https://openalex.org/C10803110","wikidata":"https://www.wikidata.org/wiki/Q1341441","display_name":"Force field (fiction)","level":2,"score":0.6308225989341736},{"id":"https://openalex.org/C186370098","wikidata":"https://www.wikidata.org/wiki/Q442787","display_name":"Energy (signal processing)","level":2,"score":0.5538003444671631},{"id":"https://openalex.org/C2779856020","wikidata":"https://www.wikidata.org/wiki/Q218642","display_name":"Alanine","level":3,"score":0.5362483859062195},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.48979878425598145},{"id":"https://openalex.org/C8880873","wikidata":"https://www.wikidata.org/wiki/Q187787","display_name":"Genetic algorithm","level":2,"score":0.45570430159568787},{"id":"https://openalex.org/C2778530040","wikidata":"https://www.wikidata.org/wiki/Q1937315","display_name":"Helix (gastropod)","level":3,"score":0.44549843668937683},{"id":"https://openalex.org/C84551667","wikidata":"https://www.wikidata.org/wiki/Q155640","display_name":"Potential energy","level":2,"score":0.4243188202381134},{"id":"https://openalex.org/C184538305","wikidata":"https://www.wikidata.org/wiki/Q283399","display_name":"Alpha helix","level":3,"score":0.4213348627090454},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.41738027334213257},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.4145486354827881},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.4095749855041504},{"id":"https://openalex.org/C8010536","wikidata":"https://www.wikidata.org/wiki/Q160398","display_name":"Crystallography","level":1,"score":0.347248911857605},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.31403517723083496},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.2997221350669861},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.28876394033432007},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.23047110438346863},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15893393754959106},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.14011871814727783},{"id":"https://openalex.org/C184779094","wikidata":"https://www.wikidata.org/wiki/Q26383","display_name":"Atomic physics","level":1,"score":0.1399567425251007},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.11669537425041199},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.09568995237350464},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.09514981508255005},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.08188357949256897},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.07117384672164917},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C2779965526","wikidata":"https://www.wikidata.org/wiki/Q308841","display_name":"Snail","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-73731-5_17","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-73731-5_17","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Affordable and clean energy","score":0.6100000143051147,"id":"https://metadata.un.org/sdg/7"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":9,"referenced_works":["https://openalex.org/W1973646362","https://openalex.org/W1984527736","https://openalex.org/W2035042310","https://openalex.org/W2074979229","https://openalex.org/W2138897464","https://openalex.org/W2166843422","https://openalex.org/W3023540311","https://openalex.org/W4285719527","https://openalex.org/W6684276203"],"related_works":["https://openalex.org/W2424327410","https://openalex.org/W2126638516","https://openalex.org/W2073270581","https://openalex.org/W1981731321","https://openalex.org/W2169955299","https://openalex.org/W2389808876","https://openalex.org/W2023100445","https://openalex.org/W2038890153","https://openalex.org/W1966293813","https://openalex.org/W2730307142"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
