{"id":"https://openalex.org/W1573488402","doi":"https://doi.org/10.1007/978-3-540-73255-6_9","title":"A High-Throughput Bioinformatics Platform for Mass Spectrometry-Based Proteomics","display_name":"A High-Throughput Bioinformatics Platform for Mass Spectrometry-Based Proteomics","publication_year":2007,"publication_date":"2007-06-29","ids":{"openalex":"https://openalex.org/W1573488402","doi":"https://doi.org/10.1007/978-3-540-73255-6_9","mag":"1573488402"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-73255-6_9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-73255-6_9","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016688534","display_name":"Thodoros Topaloglou","orcid":null},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Thodoros Topaloglou","raw_affiliation_strings":["Information Engineering, Dept of Mechanical & Industrial Eng., University of Toronto, \u00a0","Information Engineering, Dept of Mechanical & Industrial Eng., University of Toronto,"],"affiliations":[{"raw_affiliation_string":"Information Engineering, Dept of Mechanical & Industrial Eng., University of Toronto, \u00a0","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Information Engineering, Dept of Mechanical & Industrial Eng., University of Toronto,","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002863789","display_name":"Moyez Dharsee","orcid":"https://orcid.org/0000-0002-4175-0719"},"institutions":[{"id":"https://openalex.org/I4210108886","display_name":"MaRS","ror":"https://ror.org/020n6f578","country_code":"CA","type":"nonprofit","lineage":["https://openalex.org/I4210108886"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Moyez Dharsee","raw_affiliation_strings":["Infochromics, MaRS Discovery District, Toronto, \u00a0","Infochromics, MaRS Discovery District, Toronto#TAB#"],"affiliations":[{"raw_affiliation_string":"Infochromics, MaRS Discovery District, Toronto, \u00a0","institution_ids":["https://openalex.org/I4210108886"]},{"raw_affiliation_string":"Infochromics, MaRS Discovery District, Toronto#TAB#","institution_ids":["https://openalex.org/I4210108886"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061685303","display_name":"Rob M. Ewing","orcid":"https://orcid.org/0000-0001-6510-4001"},"institutions":[{"id":"https://openalex.org/I4210108886","display_name":"MaRS","ror":"https://ror.org/020n6f578","country_code":"CA","type":"nonprofit","lineage":["https://openalex.org/I4210108886"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Rob M. Ewing","raw_affiliation_strings":["Infochromics, MaRS Discovery District, Toronto, \u00a0","Infochromics, MaRS Discovery District, Toronto#TAB#"],"affiliations":[{"raw_affiliation_string":"Infochromics, MaRS Discovery District, Toronto, \u00a0","institution_ids":["https://openalex.org/I4210108886"]},{"raw_affiliation_string":"Infochromics, MaRS Discovery District, Toronto#TAB#","institution_ids":["https://openalex.org/I4210108886"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001962545","display_name":"Yury V. Bukhman","orcid":"https://orcid.org/0000-0002-8111-7651"},"institutions":[{"id":"https://openalex.org/I196764719","display_name":"Breast Cancer Research Foundation","ror":"https://ror.org/0348ff195","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I196764719"]},{"id":"https://openalex.org/I1325899441","display_name":"University Health Network","ror":"https://ror.org/042xt5161","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1325899441"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Yury Bukhman","raw_affiliation_strings":["Campbell Family Institute for Breast Cancer Research, University Health Network, Toronto, \u00a0","Campbell Family Institute for Breast Cancer Research, University Health Network, Toronto"],"affiliations":[{"raw_affiliation_string":"Campbell Family Institute for Breast Cancer Research, University Health Network, Toronto, \u00a0","institution_ids":["https://openalex.org/I1325899441"]},{"raw_affiliation_string":"Campbell Family Institute for Breast Cancer Research, University Health Network, Toronto","institution_ids":["https://openalex.org/I196764719","https://openalex.org/I1325899441"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5016688534"],"corresponding_institution_ids":["https://openalex.org/I185261750"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.06452423,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"71","last_page":"88"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9915000200271606,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7666130065917969},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.7256837487220764},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6459397673606873},{"id":"https://openalex.org/keywords/biomarker-discovery","display_name":"Biomarker discovery","score":0.6149941682815552},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6090630292892456},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.5009827613830566},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.43922582268714905},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.42827147245407104},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40489068627357483},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.39968419075012207},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.33419209718704224},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.20855727791786194},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14748331904411316}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7666130065917969},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.7256837487220764},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6459397673606873},{"id":"https://openalex.org/C124535831","wikidata":"https://www.wikidata.org/wiki/Q4915074","display_name":"Biomarker discovery","level":4,"score":0.6149941682815552},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6090630292892456},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.5009827613830566},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.43922582268714905},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.42827147245407104},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40489068627357483},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.39968419075012207},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.33419209718704224},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.20855727791786194},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14748331904411316},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-540-73255-6_9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-73255-6_9","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.557.1101","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.557.1101","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://iec01.mie.utoronto.ca/~thodoros/courses/mie1511/docs/DILS07.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W575683998","https://openalex.org/W1519955500","https://openalex.org/W1973588530","https://openalex.org/W1976645829","https://openalex.org/W1981593008","https://openalex.org/W1990299806","https://openalex.org/W1994326726","https://openalex.org/W1996692127","https://openalex.org/W2004407704","https://openalex.org/W2015556811","https://openalex.org/W2023096047","https://openalex.org/W2043285998","https://openalex.org/W2051795211","https://openalex.org/W2061008001","https://openalex.org/W2068523567","https://openalex.org/W2073162961","https://openalex.org/W2073682446","https://openalex.org/W2082006641","https://openalex.org/W2085770277","https://openalex.org/W2086216615","https://openalex.org/W2104372768","https://openalex.org/W2105696555","https://openalex.org/W2114883363","https://openalex.org/W2127938920","https://openalex.org/W2130706354","https://openalex.org/W2132899146","https://openalex.org/W2134389439","https://openalex.org/W2137718938","https://openalex.org/W2139703939","https://openalex.org/W2146103026","https://openalex.org/W2154063224","https://openalex.org/W2166574880","https://openalex.org/W2171593624","https://openalex.org/W4241435645"],"related_works":["https://openalex.org/W1539981706","https://openalex.org/W1485011350","https://openalex.org/W3089769884","https://openalex.org/W2031369865","https://openalex.org/W1969295409","https://openalex.org/W2010715465","https://openalex.org/W2558197048","https://openalex.org/W3150792906","https://openalex.org/W2039928317","https://openalex.org/W1999883774"],"abstract_inverted_index":null,"counts_by_year":[{"year":2016,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
