{"id":"https://openalex.org/W2131830734","doi":"https://doi.org/10.1007/978-3-540-73255-6_5","title":"Toward an Integrated RNA Motif Database","display_name":"Toward an Integrated RNA Motif Database","publication_year":2007,"publication_date":"2007-01-01","ids":{"openalex":"https://openalex.org/W2131830734","doi":"https://doi.org/10.1007/978-3-540-73255-6_5","mag":"2131830734"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-73255-6_5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-73255-6_5","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100378977","display_name":"Jason T. L. Wang","orcid":"https://orcid.org/0000-0002-2486-1097"},"institutions":[{"id":"https://openalex.org/I118118575","display_name":"New Jersey Institute of Technology","ror":"https://ror.org/05e74xb87","country_code":"US","type":"education","lineage":["https://openalex.org/I118118575"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jason T. L. Wang","raw_affiliation_strings":["Bioinformatics Program and Department of Computer Science, New Jersey Institute of Technology, Newark, NJ 07102,","Bioinformatics Program and Department of Computer Science, New Jersey Institute of Technology, Newark, NJ#TAB#"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Program and Department of Computer Science, New Jersey Institute of Technology, Newark, NJ 07102,","institution_ids":["https://openalex.org/I118118575"]},{"raw_affiliation_string":"Bioinformatics Program and Department of Computer Science, New Jersey Institute of Technology, Newark, NJ#TAB#","institution_ids":["https://openalex.org/I118118575"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060578667","display_name":"Dongrong Wen","orcid":null},"institutions":[{"id":"https://openalex.org/I118118575","display_name":"New Jersey Institute of Technology","ror":"https://ror.org/05e74xb87","country_code":"US","type":"education","lineage":["https://openalex.org/I118118575"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dongrong Wen","raw_affiliation_strings":["Bioinformatics Program and Department of Computer Science, New Jersey Institute of Technology, Newark, NJ 07102,","Bioinformatics Program and Department of Computer Science, New Jersey Institute of Technology, Newark, NJ#TAB#"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Program and Department of Computer Science, New Jersey Institute of Technology, Newark, NJ 07102,","institution_ids":["https://openalex.org/I118118575"]},{"raw_affiliation_string":"Bioinformatics Program and Department of Computer Science, New Jersey Institute of Technology, Newark, NJ#TAB#","institution_ids":["https://openalex.org/I118118575"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010562576","display_name":"Bruce A. Shapiro","orcid":null},"institutions":[{"id":"https://openalex.org/I4210149717","display_name":"Center for Cancer Research","ror":"https://ror.org/05bjen692","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884","https://openalex.org/I4210149717"]},{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]},{"id":"https://openalex.org/I4210130649","display_name":"Frederick National Laboratory for Cancer Research","ror":"https://ror.org/03v6m3209","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210130649","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bruce A. Shapiro","raw_affiliation_strings":["Center for Cancer Research Nanobiology Program, National Cancer Institute, Frederick, MD 21702,","Center for Cancer Research Nanobiology Program, National Cancer Institute, Frederick, MD#TAB#"],"affiliations":[{"raw_affiliation_string":"Center for Cancer Research Nanobiology Program, National Cancer Institute, Frederick, MD 21702,","institution_ids":["https://openalex.org/I4210140884","https://openalex.org/I4210149717"]},{"raw_affiliation_string":"Center for Cancer Research Nanobiology Program, National Cancer Institute, Frederick, MD#TAB#","institution_ids":["https://openalex.org/I4210130649","https://openalex.org/I4210140884","https://openalex.org/I4210149717"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090641466","display_name":"Katherine G. Herbert","orcid":"https://orcid.org/0000-0001-6663-8187"},"institutions":[{"id":"https://openalex.org/I166088655","display_name":"Montclair State University","ror":"https://ror.org/01nxc2t48","country_code":"US","type":"education","lineage":["https://openalex.org/I166088655"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Katherine G. Herbert","raw_affiliation_strings":["Department of Computer Science, Montclair State University, Montclair, NJ 07043,","[Department of Computer Science, Montclair State University, Montclair, NJ]"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Montclair State University, Montclair, NJ 07043,","institution_ids":["https://openalex.org/I166088655"]},{"raw_affiliation_string":"[Department of Computer Science, Montclair State University, Montclair, NJ]","institution_ids":["https://openalex.org/I166088655"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100336972","display_name":"Jing Li","orcid":"https://orcid.org/0000-0002-6865-7290"},"institutions":[{"id":"https://openalex.org/I118118575","display_name":"New Jersey Institute of Technology","ror":"https://ror.org/05e74xb87","country_code":"US","type":"education","lineage":["https://openalex.org/I118118575"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jing Li","raw_affiliation_strings":["Applied Statistics Program and Department of Mathematical Sciences, New Jersey Institute of Technology, Newark, NJ 07102,","Applied Statistics Program and Department of Mathematical Sciences, New Jersey Institute of Technology, Newark, NJ#TAB#"],"affiliations":[{"raw_affiliation_string":"Applied Statistics Program and Department of Mathematical Sciences, New Jersey Institute of Technology, Newark, NJ 07102,","institution_ids":["https://openalex.org/I118118575"]},{"raw_affiliation_string":"Applied Statistics Program and Department of Mathematical Sciences, New Jersey Institute of Technology, Newark, NJ#TAB#","institution_ids":["https://openalex.org/I118118575"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067575775","display_name":"Kaushik Ghosh","orcid":"https://orcid.org/0000-0002-2972-6441"},"institutions":[{"id":"https://openalex.org/I118118575","display_name":"New Jersey Institute of Technology","ror":"https://ror.org/05e74xb87","country_code":"US","type":"education","lineage":["https://openalex.org/I118118575"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kaushik Ghosh","raw_affiliation_strings":["Applied Statistics Program and Department of Mathematical Sciences, New Jersey Institute of Technology, Newark, NJ 07102,","Applied Statistics Program and Department of Mathematical Sciences, New Jersey Institute of Technology, Newark, NJ#TAB#"],"affiliations":[{"raw_affiliation_string":"Applied Statistics Program and Department of Mathematical Sciences, New Jersey Institute of Technology, Newark, NJ 07102,","institution_ids":["https://openalex.org/I118118575"]},{"raw_affiliation_string":"Applied Statistics Program and Department of Mathematical Sciences, New Jersey Institute of Technology, Newark, NJ#TAB#","institution_ids":["https://openalex.org/I118118575"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5100378977"],"corresponding_institution_ids":["https://openalex.org/I118118575"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.15114281,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"27","last_page":"36"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.8570855855941772},{"id":"https://openalex.org/keywords/structural-motif","display_name":"Structural motif","score":0.6881991624832153},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5340715050697327},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.43870043754577637},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4346272051334381},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3992357850074768},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2341850996017456}],"concepts":[{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.8570855855941772},{"id":"https://openalex.org/C132677234","wikidata":"https://www.wikidata.org/wiki/Q3273544","display_name":"Structural motif","level":2,"score":0.6881991624832153},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5340715050697327},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.43870043754577637},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4346272051334381},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3992357850074768},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2341850996017456},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-73255-6_5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-73255-6_5","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1526491974","https://openalex.org/W1557536303","https://openalex.org/W1968766436","https://openalex.org/W2037500862","https://openalex.org/W2042881722","https://openalex.org/W2043456471","https://openalex.org/W2064345118","https://openalex.org/W2065398612","https://openalex.org/W2076841418","https://openalex.org/W2092454702","https://openalex.org/W2095167252","https://openalex.org/W2102884862","https://openalex.org/W2103250001","https://openalex.org/W2132661997","https://openalex.org/W2137283579","https://openalex.org/W2137356209","https://openalex.org/W2143513829","https://openalex.org/W2152303410","https://openalex.org/W2162563495","https://openalex.org/W2163199119","https://openalex.org/W2168925241"],"related_works":["https://openalex.org/W2368410102","https://openalex.org/W3021477453","https://openalex.org/W566414894","https://openalex.org/W2364249514","https://openalex.org/W3113308218","https://openalex.org/W2610941444","https://openalex.org/W2132757463","https://openalex.org/W4229003933","https://openalex.org/W4288366168","https://openalex.org/W4220877148"],"abstract_inverted_index":null,"counts_by_year":[{"year":2013,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
