{"id":"https://openalex.org/W4244846175","doi":"https://doi.org/10.1007/978-3-540-73060-6_1","title":"Not All Scale Free Networks Are Born Equal: The Role of the Seed Graph in PPI Network Emulation","display_name":"Not All Scale Free Networks Are Born Equal: The Role of the Seed Graph in PPI Network Emulation","publication_year":2007,"publication_date":"2007-09-18","ids":{"openalex":"https://openalex.org/W4244846175","doi":"https://doi.org/10.1007/978-3-540-73060-6_1"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-73060-6_1","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-73060-6_1","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005747594","display_name":"Fereydoun Hormozdiari","orcid":"https://orcid.org/0000-0003-2703-9274"},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Fereydoun Hormozdiari","raw_affiliation_strings":["School of Computing Science, Simon Fraser University, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing Science, Simon Fraser University, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072910141","display_name":"Petra Berenbrink","orcid":"https://orcid.org/0000-0002-6930-3259"},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Petra Berenbrink","raw_affiliation_strings":["School of Computing Science, Simon Fraser University, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing Science, Simon Fraser University, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069984203","display_name":"Nata\u0161a Pr\u017eulj","orcid":"https://orcid.org/0000-0002-1290-853X"},"institutions":[{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nata\u0161a Pr\u017eulj","raw_affiliation_strings":["Department of Computer Science, University of California, Irvine, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of California, Irvine, USA","institution_ids":["https://openalex.org/I204250578"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113664716","display_name":"Cenk Sahinalp","orcid":null},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Cenk Sahinalp","raw_affiliation_strings":["School of Computing Science, Simon Fraser University, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing Science, Simon Fraser University, Canada","institution_ids":["https://openalex.org/I18014758"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.53474178,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"13"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10742","display_name":"Peer-to-Peer Network Technologies","score":0.9904000163078308,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12592","display_name":"Opinion Dynamics and Social Influence","score":0.9865999817848206,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/emulation","display_name":"Emulation","score":0.8405548334121704},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7463006377220154},{"id":"https://openalex.org/keywords/scale-free-network","display_name":"Scale-free network","score":0.6717700362205505},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.6068950891494751},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.5136699080467224},{"id":"https://openalex.org/keywords/degree-distribution","display_name":"Degree distribution","score":0.47725388407707214},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.46396103501319885},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.434080570936203},{"id":"https://openalex.org/keywords/complex-network","display_name":"Complex network","score":0.38349610567092896},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.3530837297439575},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2159700095653534},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.1534210443496704},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.05706825852394104}],"concepts":[{"id":"https://openalex.org/C149810388","wikidata":"https://www.wikidata.org/wiki/Q5374873","display_name":"Emulation","level":2,"score":0.8405548334121704},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7463006377220154},{"id":"https://openalex.org/C25580894","wikidata":"https://www.wikidata.org/wiki/Q1071058","display_name":"Scale-free network","level":3,"score":0.6717700362205505},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.6068950891494751},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.5136699080467224},{"id":"https://openalex.org/C87414783","wikidata":"https://www.wikidata.org/wiki/Q1002603","display_name":"Degree distribution","level":3,"score":0.47725388407707214},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.46396103501319885},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.434080570936203},{"id":"https://openalex.org/C34947359","wikidata":"https://www.wikidata.org/wiki/Q665189","display_name":"Complex network","level":2,"score":0.38349610567092896},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.3530837297439575},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2159700095653534},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.1534210443496704},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.05706825852394104},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C50522688","wikidata":"https://www.wikidata.org/wiki/Q189833","display_name":"Economic growth","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-540-73060-6_1","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-73060-6_1","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.139.3499","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.139.3499","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://compbio.cs.sfu.ca/publications/RECOMB_SysBio06.pdf","raw_type":"text"},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:1485283","is_oa":false,"landing_page_url":"http://discovery.ucl.ac.uk/1485283/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"     In: Ideker, T and Bafna, V, (eds.)  (Proceedings) RECOMB Satellite Conference on Systems Biology and Computational Proteomics. (pp. 1-+).  SPRINGER-VERLAG BERLIN (2007)     ","raw_type":"Proceedings paper"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W950821216","https://openalex.org/W1534714850","https://openalex.org/W1982428412","https://openalex.org/W1984137208","https://openalex.org/W2008620264","https://openalex.org/W2017205198","https://openalex.org/W2037433020","https://openalex.org/W2056380633","https://openalex.org/W2060246191","https://openalex.org/W2063639254","https://openalex.org/W2084668512","https://openalex.org/W2097147952","https://openalex.org/W2130687290","https://openalex.org/W2130790725","https://openalex.org/W2132582966","https://openalex.org/W2140827816","https://openalex.org/W2152653671","https://openalex.org/W2155723007","https://openalex.org/W2157076884","https://openalex.org/W2167680767","https://openalex.org/W2169526870","https://openalex.org/W2172049947","https://openalex.org/W4229487902","https://openalex.org/W4254962106","https://openalex.org/W4312512934"],"related_works":["https://openalex.org/W2022127515","https://openalex.org/W2375549684","https://openalex.org/W2070549402","https://openalex.org/W2516958348","https://openalex.org/W2922108232","https://openalex.org/W3034343267","https://openalex.org/W3016693850","https://openalex.org/W2049484314","https://openalex.org/W2944759572","https://openalex.org/W2088554646"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}