{"id":"https://openalex.org/W1492517042","doi":"https://doi.org/10.1007/978-3-540-72586-2_53","title":"Analytically Tuned Simulated Annealing Applied to the Protein Folding Problem","display_name":"Analytically Tuned Simulated Annealing Applied to the Protein Folding Problem","publication_year":2007,"publication_date":"2007-01-01","ids":{"openalex":"https://openalex.org/W1492517042","doi":"https://doi.org/10.1007/978-3-540-72586-2_53","mag":"1492517042"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-72586-2_53","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-540-72586-2_53","pdf_url":"https://link.springer.com/content/pdf/10.1007/978-3-540-72586-2_53.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://link.springer.com/content/pdf/10.1007/978-3-540-72586-2_53.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5021222428","display_name":"Juan Frausto\u2013Sol\u00eds","orcid":"https://orcid.org/0000-0001-9307-0734"},"institutions":[{"id":"https://openalex.org/I98461037","display_name":"Tecnol\u00f3gico de Monterrey","ror":"https://ror.org/03ayjn504","country_code":"MX","type":"education","lineage":["https://openalex.org/I98461037"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Juan Frausto-Solis","raw_affiliation_strings":["ITESM Campus Cuernavaca, Paseo de la Reforma 182-A Col. Lomas de Cuernavaca, 62589, Temixco Morelos, M\u00e9xico","ITESM Campus Cuernavaca, Paseo de la Reforma 182-A Col. Lomas de Cuernavaca, 62589, Temixco Morelos, M\u00e9xico#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ITESM Campus Cuernavaca, Paseo de la Reforma 182-A Col. Lomas de Cuernavaca, 62589, Temixco Morelos, M\u00e9xico","institution_ids":["https://openalex.org/I98461037"]},{"raw_affiliation_string":"ITESM Campus Cuernavaca, Paseo de la Reforma 182-A Col. Lomas de Cuernavaca, 62589, Temixco Morelos, M\u00e9xico#TAB#","institution_ids":["https://openalex.org/I98461037"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036906350","display_name":"Estela Rom\u00e1n","orcid":null},"institutions":[{"id":"https://openalex.org/I98461037","display_name":"Tecnol\u00f3gico de Monterrey","ror":"https://ror.org/03ayjn504","country_code":"MX","type":"education","lineage":["https://openalex.org/I98461037"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"E. F. Rom\u00e1n","raw_affiliation_strings":["ITESM Campus Cuernavaca, Paseo de la Reforma 182-A Col. Lomas de Cuernavaca, 62589, Temixco Morelos, M\u00e9xico","ITESM Campus Cuernavaca, Paseo de la Reforma 182-A Col. Lomas de Cuernavaca, 62589, Temixco Morelos, M\u00e9xico#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ITESM Campus Cuernavaca, Paseo de la Reforma 182-A Col. Lomas de Cuernavaca, 62589, Temixco Morelos, M\u00e9xico","institution_ids":["https://openalex.org/I98461037"]},{"raw_affiliation_string":"ITESM Campus Cuernavaca, Paseo de la Reforma 182-A Col. Lomas de Cuernavaca, 62589, Temixco Morelos, M\u00e9xico#TAB#","institution_ids":["https://openalex.org/I98461037"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064429412","display_name":"David Romero","orcid":"https://orcid.org/0000-0002-1685-4305"},"institutions":[{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"David Romero","raw_affiliation_strings":["IMASS UNAM,","IMASS UNAM,#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IMASS UNAM,","institution_ids":[]},{"raw_affiliation_string":"IMASS UNAM,#TAB#","institution_ids":["https://openalex.org/I8961855"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061749338","display_name":"Xavier Sober\u00f3n","orcid":"https://orcid.org/0000-0002-4498-5628"},"institutions":[{"id":"https://openalex.org/I4210102206","display_name":"Instituto Barretos de Tecnologia","ror":"https://ror.org/018w84g35","country_code":"BR","type":"nonprofit","lineage":["https://openalex.org/I4210102206"]},{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]}],"countries":["BR","MX"],"is_corresponding":false,"raw_author_name":"Xavier Soberon","raw_affiliation_strings":["IBT UNAM,","IBT UNAM,#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IBT UNAM,","institution_ids":["https://openalex.org/I4210102206"]},{"raw_affiliation_string":"IBT UNAM,#TAB#","institution_ids":["https://openalex.org/I8961855"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5037603735","display_name":"Ernesto Li\u00f1\u00e1n-Garc\u00eda","orcid":null},"institutions":[{"id":"https://openalex.org/I194672558","display_name":"Universidad Aut\u00f3noma de Coahuila","ror":"https://ror.org/00dpnh189","country_code":"MX","type":"education","lineage":["https://openalex.org/I194672558"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Ernesto Li\u00f1\u00e1n-Garc\u00eda","raw_affiliation_strings":["Universidad Aut\u00f3noma de Coahuila,","Universidad Aut\u00f4noma de Coahuila"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidad Aut\u00f3noma de Coahuila,","institution_ids":["https://openalex.org/I194672558"]},{"raw_affiliation_string":"Universidad Aut\u00f4noma de Coahuila","institution_ids":["https://openalex.org/I194672558"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.0961,"has_fulltext":true,"cited_by_count":15,"citation_normalized_percentile":{"value":0.78785015,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"370","last_page":"377"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9754999876022339,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.97079998254776,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annealing","display_name":"Annealing (glass)","score":0.8675626516342163},{"id":"https://openalex.org/keywords/simulated-annealing","display_name":"Simulated annealing","score":0.7588772177696228},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7096921801567078},{"id":"https://openalex.org/keywords/exponential-function","display_name":"Exponential function","score":0.6124567985534668},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5192759037017822},{"id":"https://openalex.org/keywords/adaptive-simulated-annealing","display_name":"Adaptive simulated annealing","score":0.4641875624656677},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.3687124252319336},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.3487642705440521},{"id":"https://openalex.org/keywords/thermodynamics","display_name":"Thermodynamics","score":0.2609540820121765},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12537828087806702},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.12053471803665161},{"id":"https://openalex.org/keywords/mathematical-analysis","display_name":"Mathematical analysis","score":0.07971757650375366}],"concepts":[{"id":"https://openalex.org/C2777855556","wikidata":"https://www.wikidata.org/wiki/Q4339544","display_name":"Annealing (glass)","level":2,"score":0.8675626516342163},{"id":"https://openalex.org/C126980161","wikidata":"https://www.wikidata.org/wiki/Q863783","display_name":"Simulated annealing","level":2,"score":0.7588772177696228},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7096921801567078},{"id":"https://openalex.org/C151376022","wikidata":"https://www.wikidata.org/wiki/Q168698","display_name":"Exponential function","level":2,"score":0.6124567985534668},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5192759037017822},{"id":"https://openalex.org/C46714192","wikidata":"https://www.wikidata.org/wiki/Q4680763","display_name":"Adaptive simulated annealing","level":3,"score":0.4641875624656677},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.3687124252319336},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.3487642705440521},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.2609540820121765},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12537828087806702},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.12053471803665161},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.07971757650375366},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-540-72586-2_53","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-540-72586-2_53","pdf_url":"https://link.springer.com/content/pdf/10.1007/978-3-540-72586-2_53.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.109.3300","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.109.3300","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://campus.cva.itesm.mx/jfrausto/Curriculum/Publications/FoldingProblemFraustoEtal.pdf","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1007/978-3-540-72586-2_53","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-540-72586-2_53","pdf_url":"https://link.springer.com/content/pdf/10.1007/978-3-540-72586-2_53.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1492517042.pdf","grobid_xml":"https://content.openalex.org/works/W1492517042.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W26772505","https://openalex.org/W113688923","https://openalex.org/W1524724187","https://openalex.org/W1527244075","https://openalex.org/W1598609232","https://openalex.org/W1603106413","https://openalex.org/W1633095303","https://openalex.org/W1966586147","https://openalex.org/W1985461192","https://openalex.org/W1990368964","https://openalex.org/W1991100157","https://openalex.org/W1997207653","https://openalex.org/W2011734083","https://openalex.org/W2016832940","https://openalex.org/W2024060531","https://openalex.org/W2030512915","https://openalex.org/W2033570280","https://openalex.org/W2035742370","https://openalex.org/W2038041295","https://openalex.org/W2045777307","https://openalex.org/W2049902088","https://openalex.org/W2062081085","https://openalex.org/W2079589162","https://openalex.org/W2117627516","https://openalex.org/W2117898940","https://openalex.org/W2134927803","https://openalex.org/W2154061444","https://openalex.org/W2154106236","https://openalex.org/W2159010139","https://openalex.org/W2162166182","https://openalex.org/W2214800112","https://openalex.org/W2486608545","https://openalex.org/W2491592081","https://openalex.org/W2496364950","https://openalex.org/W2727196157","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2261837478","https://openalex.org/W2077092686","https://openalex.org/W3007136692","https://openalex.org/W2089397391","https://openalex.org/W1967687468","https://openalex.org/W2382432451","https://openalex.org/W2394090522","https://openalex.org/W2979021254","https://openalex.org/W1965693408","https://openalex.org/W2153124834"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}