{"id":"https://openalex.org/W1566275936","doi":"https://doi.org/10.1007/978-3-540-72586-2_52","title":"Ab-origin: An Improved Tool of Heavy Chain Rearrangement Analysis for Human Immunoglobulin","display_name":"Ab-origin: An Improved Tool of Heavy Chain Rearrangement Analysis for Human Immunoglobulin","publication_year":2007,"publication_date":"2007-01-01","ids":{"openalex":"https://openalex.org/W1566275936","doi":"https://doi.org/10.1007/978-3-540-72586-2_52","mag":"1566275936"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-72586-2_52","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-540-72586-2_52","pdf_url":"https://link.springer.com/content/pdf/10.1007/978-3-540-72586-2_52.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://link.springer.com/content/pdf/10.1007/978-3-540-72586-2_52.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100411592","display_name":"Xiaojing Wang","orcid":"https://orcid.org/0000-0002-1495-4740"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaojing Wang","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Graduate School of the Chinese Academy of Sciences, 320 YueYang Road, Shanghai 200031, China","Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China","Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China and Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy ...#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Graduate School of the Chinese Academy of Sciences, 320 YueYang Road, Shanghai 200031, China","institution_ids":["https://openalex.org/I4210106477","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China and Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy ...#TAB#","institution_ids":["https://openalex.org/I4210162648","https://openalex.org/I4210106477"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003133440","display_name":"Wei Wu","orcid":"https://orcid.org/0000-0003-4019-7920"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wu Wei","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Graduate School of the Chinese Academy of Sciences, 320 YueYang Road, Shanghai 200031, China","Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China","Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China and Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy ...#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Graduate School of the Chinese Academy of Sciences, 320 YueYang Road, Shanghai 200031, China","institution_ids":["https://openalex.org/I4210106477","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China and Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy ...#TAB#","institution_ids":["https://openalex.org/I4210162648","https://openalex.org/I4210106477"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005930092","display_name":"Siyuan Zheng","orcid":"https://orcid.org/0000-0002-1031-9424"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"SiYuan Zheng","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Graduate School of the Chinese Academy of Sciences, 320 YueYang Road, Shanghai 200031, China","Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Graduate School of the Chinese Academy of Sciences, 320 YueYang Road, S "],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Graduate School of the Chinese Academy of Sciences, 320 YueYang Road, Shanghai 200031, China","institution_ids":["https://openalex.org/I4210106477","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Graduate School of the Chinese Academy of Sciences, 320 YueYang Road, S ","institution_ids":["https://openalex.org/I4210106477"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046217910","display_name":"Zanxia Cao","orcid":"https://orcid.org/0000-0002-8259-0918"},"institutions":[{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Z. W. Cao","raw_affiliation_strings":["Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China","Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China#TAB#","institution_ids":["https://openalex.org/I4210162648"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008280608","display_name":"Yixue Li","orcid":"https://orcid.org/0000-0002-1198-7176"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yixue Li","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Graduate School of the Chinese Academy of Sciences, 320 YueYang Road, Shanghai 200031, China","Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China","Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China and Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy ...#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Graduate School of the Chinese Academy of Sciences, 320 YueYang Road, Shanghai 200031, China","institution_ids":["https://openalex.org/I4210106477","https://openalex.org/I19820366"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai, China and Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy ...#TAB#","institution_ids":["https://openalex.org/I4210162648","https://openalex.org/I4210106477"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"363","last_page":"369"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11660","display_name":"Blood groups and transfusion","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2720","display_name":"Hematology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11660","display_name":"Blood groups and transfusion","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2720","display_name":"Hematology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/immunoglobulin-heavy-chain","display_name":"Immunoglobulin heavy chain","score":0.7078098058700562},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6732082366943359},{"id":"https://openalex.org/keywords/chain","display_name":"Chain (unit)","score":0.5450735688209534},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5437688827514648},{"id":"https://openalex.org/keywords/heavy-chain","display_name":"Heavy chain","score":0.5380088686943054},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.486489474773407},{"id":"https://openalex.org/keywords/germline","display_name":"Germline","score":0.47042369842529297},{"id":"https://openalex.org/keywords/immunoglobulin-light-chain","display_name":"Immunoglobulin light chain","score":0.46656906604766846},{"id":"https://openalex.org/keywords/single-chain","display_name":"Single chain","score":0.4565425217151642},{"id":"https://openalex.org/keywords/antibody","display_name":"Antibody","score":0.4556868076324463},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3653008043766022},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.34401094913482666},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17148134112358093},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14228865504264832},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1278965175151825},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.09705886244773865},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07088300585746765}],"concepts":[{"id":"https://openalex.org/C96007430","wikidata":"https://www.wikidata.org/wiki/Q3776943","display_name":"Immunoglobulin heavy chain","level":3,"score":0.7078098058700562},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6732082366943359},{"id":"https://openalex.org/C199185054","wikidata":"https://www.wikidata.org/wiki/Q552299","display_name":"Chain (unit)","level":2,"score":0.5450735688209534},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5437688827514648},{"id":"https://openalex.org/C84613547","wikidata":"https://www.wikidata.org/wiki/Q17037912","display_name":"Heavy chain","level":3,"score":0.5380088686943054},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.486489474773407},{"id":"https://openalex.org/C109825262","wikidata":"https://www.wikidata.org/wiki/Q1139164","display_name":"Germline","level":3,"score":0.47042369842529297},{"id":"https://openalex.org/C36394416","wikidata":"https://www.wikidata.org/wiki/Q949267","display_name":"Immunoglobulin light chain","level":3,"score":0.46656906604766846},{"id":"https://openalex.org/C3018816774","wikidata":"https://www.wikidata.org/wiki/Q290671","display_name":"Single chain","level":3,"score":0.4565425217151642},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.4556868076324463},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3653008043766022},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.34401094913482666},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17148134112358093},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14228865504264832},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1278965175151825},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.09705886244773865},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07088300585746765},{"id":"https://openalex.org/C1276947","wikidata":"https://www.wikidata.org/wiki/Q333","display_name":"Astronomy","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-72586-2_52","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-540-72586-2_52","pdf_url":"https://link.springer.com/content/pdf/10.1007/978-3-540-72586-2_52.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":{"id":"doi:10.1007/978-3-540-72586-2_52","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-540-72586-2_52","pdf_url":"https://link.springer.com/content/pdf/10.1007/978-3-540-72586-2_52.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3564711174","display_name":null,"funder_award_id":"2003CB715900","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321885","display_name":"Science and Technology Commission of Shanghai Municipality","ror":"https://ror.org/03kt66j61"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1566275936.pdf","grobid_xml":"https://content.openalex.org/works/W1566275936.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W1909049753","https://openalex.org/W1978876837","https://openalex.org/W2016165485","https://openalex.org/W2048002377","https://openalex.org/W2055043387","https://openalex.org/W2094011807","https://openalex.org/W2101868807","https://openalex.org/W2111098506","https://openalex.org/W2111665940","https://openalex.org/W2125604001","https://openalex.org/W4248628830"],"related_works":["https://openalex.org/W2419301406","https://openalex.org/W2095553811","https://openalex.org/W1511469829","https://openalex.org/W2047382476","https://openalex.org/W2043042073","https://openalex.org/W2000647388","https://openalex.org/W2019978127","https://openalex.org/W1658669980","https://openalex.org/W2947263917","https://openalex.org/W1566275936"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
