{"id":"https://openalex.org/W1538045391","doi":"https://doi.org/10.1007/978-3-540-72031-7_31","title":"Mining Discriminative Distance Context of Transcription Factor Binding Sites on ChIP Enriched Regions","display_name":"Mining Discriminative Distance Context of Transcription Factor Binding Sites on ChIP Enriched Regions","publication_year":2007,"publication_date":"2007-08-05","ids":{"openalex":"https://openalex.org/W1538045391","doi":"https://doi.org/10.1007/978-3-540-72031-7_31","mag":"1538045391"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-72031-7_31","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-72031-7_31","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100622520","display_name":"Hyunmin Kim","orcid":"https://orcid.org/0000-0003-0835-5044"},"institutions":[{"id":"https://openalex.org/I4210087413","display_name":"University of Colorado Health","ror":"https://ror.org/0107w4315","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087413"]},{"id":"https://openalex.org/I51713134","display_name":"University of Colorado Anschutz Medical Campus","ror":"https://ror.org/03wmf1y16","country_code":"US","type":"education","lineage":["https://openalex.org/I51713134"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Hyunmin Kim","raw_affiliation_strings":["Center for Computational Pharmacology, University of Colorado Health Sciences Center, Aurora, CO 80045, USA","Center for Computational Pharmacology, University of Colorado Health Sciences Center, Aurora, CO#TAB#"],"affiliations":[{"raw_affiliation_string":"Center for Computational Pharmacology, University of Colorado Health Sciences Center, Aurora, CO 80045, USA","institution_ids":["https://openalex.org/I51713134","https://openalex.org/I4210087413"]},{"raw_affiliation_string":"Center for Computational Pharmacology, University of Colorado Health Sciences Center, Aurora, CO#TAB#","institution_ids":["https://openalex.org/I51713134","https://openalex.org/I4210087413"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046496950","display_name":"Katherina J. Kechris","orcid":null},"institutions":[{"id":"https://openalex.org/I4210087413","display_name":"University of Colorado Health","ror":"https://ror.org/0107w4315","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087413"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Katherina J. Kechris","raw_affiliation_strings":["Department Preventive Medicine and Biometrics, University of Colorado Health Sciences Center, 4200 East Ninth Avenue, B-119, Denver, CO 80262, USA","Department Preventive Medicine and Biometrics, University of Colorado Health Sciences Center, Denver, CO#TAB#"],"affiliations":[{"raw_affiliation_string":"Department Preventive Medicine and Biometrics, University of Colorado Health Sciences Center, 4200 East Ninth Avenue, B-119, Denver, CO 80262, USA","institution_ids":["https://openalex.org/I4210087413"]},{"raw_affiliation_string":"Department Preventive Medicine and Biometrics, University of Colorado Health Sciences Center, Denver, CO#TAB#","institution_ids":["https://openalex.org/I4210087413"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041860080","display_name":"Lawrence Hunter","orcid":"https://orcid.org/0000-0003-1455-3370"},"institutions":[{"id":"https://openalex.org/I4210087413","display_name":"University of Colorado Health","ror":"https://ror.org/0107w4315","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210087413"]},{"id":"https://openalex.org/I51713134","display_name":"University of Colorado Anschutz Medical Campus","ror":"https://ror.org/03wmf1y16","country_code":"US","type":"education","lineage":["https://openalex.org/I51713134"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lawrence Hunter","raw_affiliation_strings":["Center for Computational Pharmacology, University of Colorado Health Sciences Center, Aurora, CO 80045, USA","Center for Computational Pharmacology, University of Colorado Health Sciences Center, Aurora, CO#TAB#"],"affiliations":[{"raw_affiliation_string":"Center for Computational Pharmacology, University of Colorado Health Sciences Center, Aurora, CO 80045, USA","institution_ids":["https://openalex.org/I51713134","https://openalex.org/I4210087413"]},{"raw_affiliation_string":"Center for Computational Pharmacology, University of Colorado Health Sciences Center, Aurora, CO#TAB#","institution_ids":["https://openalex.org/I51713134","https://openalex.org/I4210087413"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100622520"],"corresponding_institution_ids":["https://openalex.org/I4210087413","https://openalex.org/I51713134"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.0971,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.79145901,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"338","last_page":"349"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-binding-site","display_name":"DNA binding site","score":0.7695788145065308},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6081945896148682},{"id":"https://openalex.org/keywords/discriminative-model","display_name":"Discriminative model","score":0.5925185680389404},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4769272208213806},{"id":"https://openalex.org/keywords/binding-site","display_name":"Binding site","score":0.41053080558776855},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4092097282409668},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3843950033187866},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3755217492580414},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3256949782371521},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.30883318185806274},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2835569977760315},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.1756780743598938},{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.12907809019088745}],"concepts":[{"id":"https://openalex.org/C3662595","wikidata":"https://www.wikidata.org/wiki/Q5205743","display_name":"DNA binding site","level":5,"score":0.7695788145065308},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6081945896148682},{"id":"https://openalex.org/C97931131","wikidata":"https://www.wikidata.org/wiki/Q5282087","display_name":"Discriminative model","level":2,"score":0.5925185680389404},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4769272208213806},{"id":"https://openalex.org/C107824862","wikidata":"https://www.wikidata.org/wiki/Q616005","display_name":"Binding site","level":2,"score":0.41053080558776855},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4092097282409668},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3843950033187866},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3755217492580414},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3256949782371521},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.30883318185806274},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2835569977760315},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.1756780743598938},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.12907809019088745},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-72031-7_31","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-72031-7_31","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8199999928474426,"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W26772505","https://openalex.org/W1483073028","https://openalex.org/W1551909886","https://openalex.org/W1984195830","https://openalex.org/W1987122345","https://openalex.org/W2021329604","https://openalex.org/W2025397278","https://openalex.org/W2028263033","https://openalex.org/W2029873987","https://openalex.org/W2040010062","https://openalex.org/W2052711770","https://openalex.org/W2084620487","https://openalex.org/W2084908610","https://openalex.org/W2094036688","https://openalex.org/W2105315497","https://openalex.org/W2112717966","https://openalex.org/W2114066176","https://openalex.org/W2129580803","https://openalex.org/W2129905273","https://openalex.org/W2139580799","https://openalex.org/W2142049361","https://openalex.org/W2146999361","https://openalex.org/W2150111516","https://openalex.org/W2152890695","https://openalex.org/W2153800196","https://openalex.org/W2166740584","https://openalex.org/W2168783124","https://openalex.org/W2502258425","https://openalex.org/W2911964244","https://openalex.org/W4233014035"],"related_works":["https://openalex.org/W2036927633","https://openalex.org/W2152664145","https://openalex.org/W2153561273","https://openalex.org/W2079197459","https://openalex.org/W2165899269","https://openalex.org/W2236968607","https://openalex.org/W2090848290","https://openalex.org/W2146393977","https://openalex.org/W2617836174","https://openalex.org/W2122429294"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
