{"id":"https://openalex.org/W1581129565","doi":"https://doi.org/10.1007/978-3-540-72031-7_30","title":"Enhancing Motif Refinement by Incorporating Comparative Genomics Data","display_name":"Enhancing Motif Refinement by Incorporating Comparative Genomics Data","publication_year":2007,"publication_date":"2007-08-05","ids":{"openalex":"https://openalex.org/W1581129565","doi":"https://doi.org/10.1007/978-3-540-72031-7_30","mag":"1581129565"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-72031-7_30","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-72031-7_30","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062079290","display_name":"Erliang Zeng","orcid":"https://orcid.org/0000-0002-2891-6497"},"institutions":[{"id":"https://openalex.org/I19700959","display_name":"Florida International University","ror":"https://ror.org/02gz6gg07","country_code":"US","type":"education","lineage":["https://openalex.org/I19700959"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Erliang Zeng","raw_affiliation_strings":["Bioinformatics Research Group (BioRG), School of Computing and Information Sciences, Florida International University, Miami, Florida, 33199, USA","School of Computing and Information Sciences, Florida International University, Miami, Florida"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Research Group (BioRG), School of Computing and Information Sciences, Florida International University, Miami, Florida, 33199, USA","institution_ids":["https://openalex.org/I19700959"]},{"raw_affiliation_string":"School of Computing and Information Sciences, Florida International University, Miami, Florida","institution_ids":["https://openalex.org/I19700959"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068890173","display_name":"Giri Narasimhan","orcid":"https://orcid.org/0000-0003-0535-4871"},"institutions":[{"id":"https://openalex.org/I19700959","display_name":"Florida International University","ror":"https://ror.org/02gz6gg07","country_code":"US","type":"education","lineage":["https://openalex.org/I19700959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Giri Narasimhan","raw_affiliation_strings":["Bioinformatics Research Group (BioRG), School of Computing and Information Sciences, Florida International University, Miami, Florida, 33199, USA","School of Computing and Information Sciences, Florida International University, Miami, Florida"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Research Group (BioRG), School of Computing and Information Sciences, Florida International University, Miami, Florida, 33199, USA","institution_ids":["https://openalex.org/I19700959"]},{"raw_affiliation_string":"School of Computing and Information Sciences, Florida International University, Miami, Florida","institution_ids":["https://openalex.org/I19700959"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5062079290"],"corresponding_institution_ids":["https://openalex.org/I19700959"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.12330297,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"329","last_page":"337"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.989799976348877,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9894000291824341,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.7663075923919678},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.6777925491333008},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"Comparative genomics","score":0.6334966421127319},{"id":"https://openalex.org/keywords/false-positive-paradox","display_name":"False positive paradox","score":0.6324173808097839},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5839143991470337},{"id":"https://openalex.org/keywords/dna-binding-site","display_name":"DNA binding site","score":0.4847545325756073},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.48273155093193054},{"id":"https://openalex.org/keywords/sequence-motif","display_name":"Sequence motif","score":0.4506622850894928},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4479066729545593},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3557906448841095},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.34372326731681824},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.25200581550598145},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24037522077560425},{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.1916733682155609},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.1654474139213562},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.09663331508636475}],"concepts":[{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.7663075923919678},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.6777925491333008},{"id":"https://openalex.org/C105176652","wikidata":"https://www.wikidata.org/wiki/Q1147112","display_name":"Comparative genomics","level":5,"score":0.6334966421127319},{"id":"https://openalex.org/C64869954","wikidata":"https://www.wikidata.org/wiki/Q1859747","display_name":"False positive paradox","level":2,"score":0.6324173808097839},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5839143991470337},{"id":"https://openalex.org/C3662595","wikidata":"https://www.wikidata.org/wiki/Q5205743","display_name":"DNA binding site","level":5,"score":0.4847545325756073},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.48273155093193054},{"id":"https://openalex.org/C117745874","wikidata":"https://www.wikidata.org/wiki/Q901612","display_name":"Sequence motif","level":3,"score":0.4506622850894928},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4479066729545593},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3557906448841095},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.34372326731681824},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.25200581550598145},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24037522077560425},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.1916733682155609},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.1654474139213562},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09663331508636475},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-72031-7_30","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-72031-7_30","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W311334411","https://openalex.org/W1592870802","https://openalex.org/W1896499191","https://openalex.org/W1981800986","https://openalex.org/W1984053739","https://openalex.org/W2003967338","https://openalex.org/W2041726559","https://openalex.org/W2054624670","https://openalex.org/W2073850887","https://openalex.org/W2074530889","https://openalex.org/W2085442947","https://openalex.org/W2088639752","https://openalex.org/W2089783852","https://openalex.org/W2091414138","https://openalex.org/W2103447044","https://openalex.org/W2109830628","https://openalex.org/W2115761267","https://openalex.org/W2115950725","https://openalex.org/W2121356022","https://openalex.org/W2134591904","https://openalex.org/W2135221645","https://openalex.org/W2135951244","https://openalex.org/W2141408320","https://openalex.org/W2145133452","https://openalex.org/W2146074524","https://openalex.org/W2149769193","https://openalex.org/W2154165587","https://openalex.org/W2154412571","https://openalex.org/W2157076973","https://openalex.org/W2158561153","https://openalex.org/W2168157737","https://openalex.org/W4235613361"],"related_works":["https://openalex.org/W2073661767","https://openalex.org/W2143211236","https://openalex.org/W2380185347","https://openalex.org/W2370034659","https://openalex.org/W1976093396","https://openalex.org/W2103777723","https://openalex.org/W2159636084","https://openalex.org/W2610941444","https://openalex.org/W2117168988","https://openalex.org/W2154430121"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
