{"id":"https://openalex.org/W2057965523","doi":"https://doi.org/10.1007/978-3-540-71681-5_20","title":"Multiple Sequence Alignment Based on Profile Alignment of Intermediate Sequences","display_name":"Multiple Sequence Alignment Based on Profile Alignment of Intermediate Sequences","publication_year":2007,"publication_date":"2007-05-17","ids":{"openalex":"https://openalex.org/W2057965523","doi":"https://doi.org/10.1007/978-3-540-71681-5_20","mag":"2057965523"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-71681-5_20","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-71681-5_20","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031868292","display_name":"Yue Lu","orcid":"https://orcid.org/0000-0003-4062-6553"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yue Lu","raw_affiliation_strings":["Department of Biochemistry & Biophysics,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry & Biophysics,","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5107809749","display_name":"Sing\u2010Hoi Sze","orcid":null},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sing-Hoi Sze","raw_affiliation_strings":["Department of Biochemistry & Biophysics,","Department of Computer Science, Texas A&M University, College Station, TX 77843, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry & Biophysics,","institution_ids":[]},{"raw_affiliation_string":"Department of Computer Science, Texas A&M University, College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"283","last_page":"295"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9883999824523926,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9764999747276306,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.8549915552139282},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.7305489778518677},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6929320096969604},{"id":"https://openalex.org/keywords/alignment-free-sequence-analysis","display_name":"Alignment-free sequence analysis","score":0.6608654260635376},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.6244288682937622},{"id":"https://openalex.org/keywords/structural-alignment","display_name":"Structural alignment","score":0.5761388540267944},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5415831208229065},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4895966649055481},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.48334118723869324},{"id":"https://openalex.org/keywords/smith\u2013waterman-algorithm","display_name":"Smith\u2013Waterman algorithm","score":0.4573906660079956},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.36414027214050293},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3217003345489502},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.09427332878112793},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07810032367706299},{"id":"https://openalex.org/keywords/cartography","display_name":"Cartography","score":0.06067749857902527}],"concepts":[{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.8549915552139282},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.7305489778518677},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6929320096969604},{"id":"https://openalex.org/C180384323","wikidata":"https://www.wikidata.org/wiki/Q16335137","display_name":"Alignment-free sequence analysis","level":5,"score":0.6608654260635376},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.6244288682937622},{"id":"https://openalex.org/C4668613","wikidata":"https://www.wikidata.org/wiki/Q4116110","display_name":"Structural alignment","level":5,"score":0.5761388540267944},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5415831208229065},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4895966649055481},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.48334118723869324},{"id":"https://openalex.org/C72802188","wikidata":"https://www.wikidata.org/wiki/Q1683352","display_name":"Smith\u2013Waterman algorithm","level":5,"score":0.4573906660079956},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.36414027214050293},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3217003345489502},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.09427332878112793},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07810032367706299},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.06067749857902527},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-71681-5_20","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-71681-5_20","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":41,"referenced_works":["https://openalex.org/W1489075871","https://openalex.org/W1590240800","https://openalex.org/W1834968294","https://openalex.org/W1938894828","https://openalex.org/W2004178884","https://openalex.org/W2018120747","https://openalex.org/W2051969447","https://openalex.org/W2052831012","https://openalex.org/W2080336769","https://openalex.org/W2084297478","https://openalex.org/W2087064593","https://openalex.org/W2100033550","https://openalex.org/W2101418959","https://openalex.org/W2102502076","https://openalex.org/W2106241755","https://openalex.org/W2106882534","https://openalex.org/W2108642468","https://openalex.org/W2109607376","https://openalex.org/W2111937814","https://openalex.org/W2117477006","https://openalex.org/W2121691652","https://openalex.org/W2123338063","https://openalex.org/W2127122014","https://openalex.org/W2132926880","https://openalex.org/W2134571902","https://openalex.org/W2135083016","https://openalex.org/W2136570298","https://openalex.org/W2138369959","https://openalex.org/W2140872496","https://openalex.org/W2141411672","https://openalex.org/W2142113273","https://openalex.org/W2144362290","https://openalex.org/W2153187042","https://openalex.org/W2158714788","https://openalex.org/W2166718648","https://openalex.org/W2176645417","https://openalex.org/W2180982073","https://openalex.org/W2330406605","https://openalex.org/W3214380909","https://openalex.org/W4245668478","https://openalex.org/W4255011371"],"related_works":["https://openalex.org/W2051969447","https://openalex.org/W2468116983","https://openalex.org/W2029514038","https://openalex.org/W2111937814","https://openalex.org/W1486249959","https://openalex.org/W2141411672","https://openalex.org/W2103737249","https://openalex.org/W1482324242","https://openalex.org/W2122131968","https://openalex.org/W2948014085"],"abstract_inverted_index":null,"counts_by_year":[{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
