{"id":"https://openalex.org/W1573203924","doi":"https://doi.org/10.1007/978-3-540-71681-5_17","title":"Heuristics for the Gene-Duplication Problem: A \u0398(n) Speed-Up for the Local Search","display_name":"Heuristics for the Gene-Duplication Problem: A \u0398(n) Speed-Up for the Local Search","publication_year":2007,"publication_date":"2007-05-17","ids":{"openalex":"https://openalex.org/W1573203924","doi":"https://doi.org/10.1007/978-3-540-71681-5_17","mag":"1573203924"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-71681-5_17","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-71681-5_17","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024793976","display_name":"Mukul S. Bansal","orcid":"https://orcid.org/0000-0003-0039-2596"},"institutions":[{"id":"https://openalex.org/I173911158","display_name":"Iowa State University","ror":"https://ror.org/04rswrd78","country_code":"US","type":"education","lineage":["https://openalex.org/I173911158"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mukul S. Bansal","raw_affiliation_strings":["Department of Computer Science, Iowa State University, Ames, IA, USA","DEPARTMENT OF COMPUTER SCIENCE IOWA STATE UNIVERSITY AMES IA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Iowa State University, Ames, IA, USA","institution_ids":["https://openalex.org/I173911158"]},{"raw_affiliation_string":"DEPARTMENT OF COMPUTER SCIENCE IOWA STATE UNIVERSITY AMES IA","institution_ids":["https://openalex.org/I173911158"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026152724","display_name":"J. Gordon Burleigh","orcid":"https://orcid.org/0000-0001-8120-5136"},"institutions":[{"id":"https://openalex.org/I6002401","display_name":"National Evolutionary Synthesis Center","ror":"https://ror.org/001ykb961","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I6002401"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Gordon Burleigh","raw_affiliation_strings":["National Evolutionary Synthesis Center Durham, NC, USA","National Evolutionary Synthesis Center, Durham, NC"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Evolutionary Synthesis Center Durham, NC, USA","institution_ids":["https://openalex.org/I6002401"]},{"raw_affiliation_string":"National Evolutionary Synthesis Center, Durham, NC","institution_ids":["https://openalex.org/I6002401"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041404337","display_name":"Oliver Eulenstein","orcid":"https://orcid.org/0000-0002-5291-3798"},"institutions":[{"id":"https://openalex.org/I173911158","display_name":"Iowa State University","ror":"https://ror.org/04rswrd78","country_code":"US","type":"education","lineage":["https://openalex.org/I173911158"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Oliver Eulenstein","raw_affiliation_strings":["Department of Computer Science, Iowa State University, Ames, IA, USA","DEPARTMENT OF COMPUTER SCIENCE IOWA STATE UNIVERSITY AMES IA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Iowa State University, Ames, IA, USA","institution_ids":["https://openalex.org/I173911158"]},{"raw_affiliation_string":"DEPARTMENT OF COMPUTER SCIENCE IOWA STATE UNIVERSITY AMES IA","institution_ids":["https://openalex.org/I173911158"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051576626","display_name":"Andr\u00e9 Wehe","orcid":null},"institutions":[{"id":"https://openalex.org/I173911158","display_name":"Iowa State University","ror":"https://ror.org/04rswrd78","country_code":"US","type":"education","lineage":["https://openalex.org/I173911158"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andr\u00e9 Wehe","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Iowa State University, Ames, IA, USA","[Dept. of Electrical and Computer Engineering Iowa State University, Ames, IA]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Iowa State University, Ames, IA, USA","institution_ids":["https://openalex.org/I173911158"]},{"raw_affiliation_string":"[Dept. of Electrical and Computer Engineering Iowa State University, Ames, IA]","institution_ids":["https://openalex.org/I173911158"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":14.2494,"has_fulltext":false,"cited_by_count":48,"citation_normalized_percentile":{"value":0.99037635,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"238","last_page":"252"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/supertree","display_name":"Supertree","score":0.9438738822937012},{"id":"https://openalex.org/keywords/heuristics","display_name":"Heuristics","score":0.8432300090789795},{"id":"https://openalex.org/keywords/gene-duplication","display_name":"Gene duplication","score":0.6719500422477722},{"id":"https://openalex.org/keywords/genbank","display_name":"GenBank","score":0.6096914410591125},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.5193139910697937},{"id":"https://openalex.org/keywords/local-search","display_name":"Local search (optimization)","score":0.5161024928092957},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.46103596687316895},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.40181779861450195},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3601107597351074},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.3457651138305664},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3254631757736206},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.32195448875427246},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23945564031600952},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.18366053700447083}],"concepts":[{"id":"https://openalex.org/C55919133","wikidata":"https://www.wikidata.org/wiki/Q7644297","display_name":"Supertree","level":4,"score":0.9438738822937012},{"id":"https://openalex.org/C127705205","wikidata":"https://www.wikidata.org/wiki/Q5748245","display_name":"Heuristics","level":2,"score":0.8432300090789795},{"id":"https://openalex.org/C7602840","wikidata":"https://www.wikidata.org/wiki/Q746284","display_name":"Gene duplication","level":3,"score":0.6719500422477722},{"id":"https://openalex.org/C79029880","wikidata":"https://www.wikidata.org/wiki/Q901755","display_name":"GenBank","level":3,"score":0.6096914410591125},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.5193139910697937},{"id":"https://openalex.org/C135320971","wikidata":"https://www.wikidata.org/wiki/Q1868524","display_name":"Local search (optimization)","level":2,"score":0.5161024928092957},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.46103596687316895},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.40181779861450195},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3601107597351074},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.3457651138305664},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3254631757736206},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.32195448875427246},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23945564031600952},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.18366053700447083}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-540-71681-5_17","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-71681-5_17","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.122.3011","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.122.3011","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cs.iastate.edu/~bansal/BansalRECOMB07.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W71841000","https://openalex.org/W1543611576","https://openalex.org/W1574082713","https://openalex.org/W1915029112","https://openalex.org/W1970865484","https://openalex.org/W1974796427","https://openalex.org/W1978858440","https://openalex.org/W1982901388","https://openalex.org/W1984709097","https://openalex.org/W2007802079","https://openalex.org/W2011999472","https://openalex.org/W2019182846","https://openalex.org/W2032603188","https://openalex.org/W2034442699","https://openalex.org/W2044630770","https://openalex.org/W2044789562","https://openalex.org/W2046039468","https://openalex.org/W2047479519","https://openalex.org/W2061646232","https://openalex.org/W2097706568","https://openalex.org/W2106882534","https://openalex.org/W2118127427","https://openalex.org/W2133398395","https://openalex.org/W2135281627","https://openalex.org/W2137120608","https://openalex.org/W2142693674","https://openalex.org/W2159892619","https://openalex.org/W4230073781","https://openalex.org/W4231886136","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2040811618","https://openalex.org/W1981037505","https://openalex.org/W4250071703","https://openalex.org/W4212802173","https://openalex.org/W2053118947","https://openalex.org/W2732875821","https://openalex.org/W4256402898","https://openalex.org/W4242614412","https://openalex.org/W2170787151","https://openalex.org/W2181196731"],"abstract_inverted_index":null,"counts_by_year":[{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":8}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
