{"id":"https://openalex.org/W1779169497","doi":"https://doi.org/10.1007/978-3-540-71233-6_24","title":"Patch Prediction of Protein Interaction Sites: Validation of a Scoring Function for an Online Server","display_name":"Patch Prediction of Protein Interaction Sites: Validation of a Scoring Function for an Online Server","publication_year":2007,"publication_date":"2007-05-21","ids":{"openalex":"https://openalex.org/W1779169497","doi":"https://doi.org/10.1007/978-3-540-71233-6_24","mag":"1779169497"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-71233-6_24","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-71233-6_24","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/presentation/Patch_prediction_of_protein_interaction_sites_Validation_of_a_scoring_function_for_an_online_server/23357660","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056247922","display_name":"Susan R. Jones","orcid":"https://orcid.org/0000-0002-1560-9009"},"institutions":[{"id":"https://openalex.org/I162608824","display_name":"University of Sussex","ror":"https://ror.org/00ayhx656","country_code":"GB","type":"education","lineage":["https://openalex.org/I162608824"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Susan Jones","raw_affiliation_strings":["Department of Biochemistry, John Maynard Smith Building, School of Life Sciences, University of Sussex, Falmer, BN1 9RH, UK","Department of Biochemistry, School of Life Sciences, University of Sussex, Falmer, UK#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, John Maynard Smith Building, School of Life Sciences, University of Sussex, Falmer, BN1 9RH, UK","institution_ids":["https://openalex.org/I162608824"]},{"raw_affiliation_string":"Department of Biochemistry, School of Life Sciences, University of Sussex, Falmer, UK#TAB#","institution_ids":["https://openalex.org/I162608824"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013351374","display_name":"Yoichi Mukarami","orcid":null},"institutions":[{"id":"https://openalex.org/I162608824","display_name":"University of Sussex","ror":"https://ror.org/00ayhx656","country_code":"GB","type":"education","lineage":["https://openalex.org/I162608824"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Yoichi Mukarami","raw_affiliation_strings":["Department of Biochemistry, John Maynard Smith Building, School of Life Sciences, University of Sussex, Falmer, BN1 9RH, UK","Department of Biochemistry, School of Life Sciences, University of Sussex, Falmer, UK#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, John Maynard Smith Building, School of Life Sciences, University of Sussex, Falmer, BN1 9RH, UK","institution_ids":["https://openalex.org/I162608824"]},{"raw_affiliation_string":"Department of Biochemistry, School of Life Sciences, University of Sussex, Falmer, UK#TAB#","institution_ids":["https://openalex.org/I162608824"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5056247922"],"corresponding_institution_ids":["https://openalex.org/I162608824"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.13474263,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"303","last_page":"313"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11124","display_name":"Protein purification and stability","score":0.989799976348877,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9876000285148621,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5633448958396912},{"id":"https://openalex.org/keywords/protein-function","display_name":"Protein function","score":0.5315233469009399},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5225847959518433},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.482189804315567},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.4686400592327118},{"id":"https://openalex.org/keywords/surface-protein","display_name":"Surface protein","score":0.43153083324432373},{"id":"https://openalex.org/keywords/solvation","display_name":"Solvation","score":0.41800791025161743},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3903866410255432},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.39018604159355164},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.3440850079059601},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2797923684120178},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13569915294647217},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.0920238196849823}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5633448958396912},{"id":"https://openalex.org/C2986374874","wikidata":"https://www.wikidata.org/wiki/Q8054","display_name":"Protein function","level":3,"score":0.5315233469009399},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5225847959518433},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.482189804315567},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.4686400592327118},{"id":"https://openalex.org/C3019232848","wikidata":"https://www.wikidata.org/wiki/Q29548","display_name":"Surface protein","level":2,"score":0.43153083324432373},{"id":"https://openalex.org/C148093993","wikidata":"https://www.wikidata.org/wiki/Q739398","display_name":"Solvation","level":3,"score":0.41800791025161743},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3903866410255432},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.39018604159355164},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.3440850079059601},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2797923684120178},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13569915294647217},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0920238196849823},{"id":"https://openalex.org/C2780471494","wikidata":"https://www.wikidata.org/wiki/Q146505","display_name":"Solvent","level":2,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-540-71233-6_24","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-71233-6_24","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:figshare.com:article/23357660","is_oa":true,"landing_page_url":"https://figshare.com/articles/presentation/Patch_prediction_of_protein_interaction_sites_Validation_of_a_scoring_function_for_an_online_server/23357660","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/23357660","is_oa":true,"landing_page_url":"https://figshare.com/articles/presentation/Patch_prediction_of_protein_interaction_sites_Validation_of_a_scoring_function_for_an_online_server/23357660","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":31,"referenced_works":["https://openalex.org/W1483099488","https://openalex.org/W1526151739","https://openalex.org/W1792865908","https://openalex.org/W1965410913","https://openalex.org/W1983036219","https://openalex.org/W1989425081","https://openalex.org/W2007451197","https://openalex.org/W2011845231","https://openalex.org/W2031772330","https://openalex.org/W2040074453","https://openalex.org/W2040765122","https://openalex.org/W2075770210","https://openalex.org/W2083978969","https://openalex.org/W2094148990","https://openalex.org/W2097697746","https://openalex.org/W2101362041","https://openalex.org/W2108067237","https://openalex.org/W2112743424","https://openalex.org/W2114586294","https://openalex.org/W2115410056","https://openalex.org/W2128888818","https://openalex.org/W2130479394","https://openalex.org/W2136525667","https://openalex.org/W2139135429","https://openalex.org/W2143395586","https://openalex.org/W2148853951","https://openalex.org/W2154297643","https://openalex.org/W2157576293","https://openalex.org/W2165739018","https://openalex.org/W4232185019","https://openalex.org/W4249030130"],"related_works":["https://openalex.org/W4255644844","https://openalex.org/W2768732437","https://openalex.org/W1992223954","https://openalex.org/W1511994447","https://openalex.org/W2301371353","https://openalex.org/W2075580221","https://openalex.org/W2375209783","https://openalex.org/W2110486604","https://openalex.org/W2144344817","https://openalex.org/W4388831384"],"abstract_inverted_index":null,"counts_by_year":[{"year":2012,"cited_by_count":2}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
