{"id":"https://openalex.org/W1497227314","doi":"https://doi.org/10.1007/978-3-540-70939-8_51","title":"NLP-Based Curation of Bacterial Regulatory Networks","display_name":"NLP-Based Curation of Bacterial Regulatory Networks","publication_year":2007,"publication_date":"2007-01-01","ids":{"openalex":"https://openalex.org/W1497227314","doi":"https://doi.org/10.1007/978-3-540-70939-8_51","mag":"1497227314"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-70939-8_51","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-70939-8_51","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044768193","display_name":"Carlos Gerardo Rodriguez-Penagos","orcid":"https://orcid.org/0000-0001-8744-0380"},"institutions":[{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]}],"countries":["MX"],"is_corresponding":true,"raw_author_name":"Carlos Rodr\u00edguez-Penagos","raw_affiliation_strings":["Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100, Mexico","Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100,  "],"affiliations":[{"raw_affiliation_string":"Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100, Mexico","institution_ids":["https://openalex.org/I8961855"]},{"raw_affiliation_string":"Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100,  ","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091338305","display_name":"Heladia Salgado","orcid":"https://orcid.org/0000-0002-3166-5801"},"institutions":[{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Heladia Salgado","raw_affiliation_strings":["Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100, Mexico","Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100,  "],"affiliations":[{"raw_affiliation_string":"Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100, Mexico","institution_ids":["https://openalex.org/I8961855"]},{"raw_affiliation_string":"Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100,  ","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083901001","display_name":"Irma Mart\u00ednez\u2010Flores","orcid":"https://orcid.org/0000-0001-9350-8978"},"institutions":[{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Irma Mart\u00ednez-Flores","raw_affiliation_strings":["Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100, Mexico","Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100,  "],"affiliations":[{"raw_affiliation_string":"Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100, Mexico","institution_ids":["https://openalex.org/I8961855"]},{"raw_affiliation_string":"Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100,  ","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079232768","display_name":"Julio Collado\u2010Vides","orcid":"https://orcid.org/0000-0001-8780-7664"},"institutions":[{"id":"https://openalex.org/I8961855","display_name":"Universidad Nacional Aut\u00f3noma de M\u00e9xico","ror":"https://ror.org/01tmp8f25","country_code":"MX","type":"education","lineage":["https://openalex.org/I8961855"]}],"countries":["MX"],"is_corresponding":false,"raw_author_name":"Julio Collado-Vides","raw_affiliation_strings":["Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100, Mexico","Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100,  "],"affiliations":[{"raw_affiliation_string":"Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100, Mexico","institution_ids":["https://openalex.org/I8961855"]},{"raw_affiliation_string":"Programa de Gen\u00f3mica Computacional, Centro de Ciencias Gen\u00f3micas. Universidad Nacional Aut\u00f3noma de M\u00e9xico, Apdo. Postal 565-A, Avenida Universidad, Cuernavaca, Morelos, 62100,  ","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5044768193"],"corresponding_institution_ids":["https://openalex.org/I8961855"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.5485,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.70054992,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"575","last_page":"586"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9927999973297119,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9811000227928162,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8484407663345337},{"id":"https://openalex.org/keywords/markup-language","display_name":"Markup language","score":0.7901660203933716},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.6857470273971558},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.562243640422821},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5119820237159729},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.43662792444229126},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.37772491574287415},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.35357362031936646},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2540299594402313},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.24766191840171814},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.1814202070236206},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.12751558423042297},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11740642786026001},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08285379409790039}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8484407663345337},{"id":"https://openalex.org/C45874996","wikidata":"https://www.wikidata.org/wiki/Q37045","display_name":"Markup language","level":3,"score":0.7901660203933716},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.6857470273971558},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.562243640422821},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5119820237159729},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.43662792444229126},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.37772491574287415},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.35357362031936646},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2540299594402313},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.24766191840171814},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.1814202070236206},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.12751558423042297},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11740642786026001},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08285379409790039},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-70939-8_51","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-70939-8_51","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1541931954","https://openalex.org/W1542291579","https://openalex.org/W1582187731","https://openalex.org/W1917508089","https://openalex.org/W2009433284","https://openalex.org/W2035967403","https://openalex.org/W2079672926","https://openalex.org/W2100525485","https://openalex.org/W2113024448","https://openalex.org/W2118806902","https://openalex.org/W2122904379","https://openalex.org/W2126276057","https://openalex.org/W2132773777","https://openalex.org/W2146856779","https://openalex.org/W2158505321","https://openalex.org/W2158896284"],"related_works":["https://openalex.org/W4306317641","https://openalex.org/W1488337274","https://openalex.org/W2216178707","https://openalex.org/W3095602079","https://openalex.org/W4287611188","https://openalex.org/W2111303602","https://openalex.org/W2951897737","https://openalex.org/W2762474792","https://openalex.org/W2891678595","https://openalex.org/W2772431536"],"abstract_inverted_index":null,"counts_by_year":[{"year":2013,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
