{"id":"https://openalex.org/W1833592345","doi":"https://doi.org/10.1007/978-3-540-70778-3_17","title":"From Biomedical Literature to Knowledge: Mining Protein-Protein Interactions","display_name":"From Biomedical Literature to Knowledge: Mining Protein-Protein Interactions","publication_year":2009,"publication_date":"2009-01-27","ids":{"openalex":"https://openalex.org/W1833592345","doi":"https://doi.org/10.1007/978-3-540-70778-3_17","mag":"1833592345"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-70778-3_17","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-70778-3_17","pdf_url":null,"source":{"id":"https://openalex.org/S2764461748","display_name":"Studies in computational intelligence","issn_l":"1860-949X","issn":["1860-949X","1860-9503"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Computational Intelligence","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007145568","display_name":"Deyu Zhou","orcid":"https://orcid.org/0000-0001-7702-9387"},"institutions":[{"id":"https://openalex.org/I71052956","display_name":"University of Reading","ror":"https://ror.org/05v62cm79","country_code":"GB","type":"education","lineage":["https://openalex.org/I71052956"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Deyu Zhou","raw_affiliation_strings":["Informatics Research Centre, The University of Reading, Reading, UK","The University of Reading,"],"affiliations":[{"raw_affiliation_string":"Informatics Research Centre, The University of Reading, Reading, UK","institution_ids":["https://openalex.org/I71052956"]},{"raw_affiliation_string":"The University of Reading,","institution_ids":["https://openalex.org/I71052956"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015709853","display_name":"Yulan He","orcid":"https://orcid.org/0000-0003-3948-5845"},"institutions":[{"id":"https://openalex.org/I71052956","display_name":"University of Reading","ror":"https://ror.org/05v62cm79","country_code":"GB","type":"education","lineage":["https://openalex.org/I71052956"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Yulan He","raw_affiliation_strings":["Informatics Research Centre, The University of Reading, Reading, UK","The University of Reading,"],"affiliations":[{"raw_affiliation_string":"Informatics Research Centre, The University of Reading, Reading, UK","institution_ids":["https://openalex.org/I71052956"]},{"raw_affiliation_string":"The University of Reading,","institution_ids":["https://openalex.org/I71052956"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027208445","display_name":"Chee Keong Kwoh","orcid":"https://orcid.org/0000-0002-8547-6387"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Chee Keong Kwoh","raw_affiliation_strings":["School of Computer Engineering, Nanyang Technological University, Singapore","Nanyang Technological University"],"affiliations":[{"raw_affiliation_string":"School of Computer Engineering, Nanyang Technological University, Singapore","institution_ids":["https://openalex.org/I172675005"]},{"raw_affiliation_string":"Nanyang Technological University","institution_ids":["https://openalex.org/I172675005"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5007145568"],"corresponding_institution_ids":["https://openalex.org/I71052956"],"apc_list":null,"apc_paid":null,"fwci":1.3935,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.81669298,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"397","last_page":"421"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9854000210762024,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9761999845504761,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biomedicine","display_name":"Biomedicine","score":0.8465936183929443},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.6986395716667175},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6571769118309021},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6198486089706421},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5877439379692078},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5857885479927063},{"id":"https://openalex.org/keywords/knowledge-extraction","display_name":"Knowledge extraction","score":0.5349494218826294},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.44378262758255005},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.39035624265670776},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.2988121807575226},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2557636797428131},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.23477670550346375},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.0967053771018982}],"concepts":[{"id":"https://openalex.org/C66782513","wikidata":"https://www.wikidata.org/wiki/Q864601","display_name":"Biomedicine","level":2,"score":0.8465936183929443},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.6986395716667175},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6571769118309021},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6198486089706421},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5877439379692078},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5857885479927063},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.5349494218826294},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.44378262758255005},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.39035624265670776},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.2988121807575226},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2557636797428131},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.23477670550346375},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0967053771018982},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-540-70778-3_17","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-70778-3_17","pdf_url":null,"source":{"id":"https://openalex.org/S2764461748","display_name":"Studies in computational intelligence","issn_l":"1860-949X","issn":["1860-949X","1860-9503"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Computational Intelligence","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.331.7364","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.331.7364","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://people.kmi.open.ac.uk/yulan/PAPERS/BookChapter08.pdf","raw_type":"text"},{"id":"pmh:oai:oro.open.ac.uk:23789","is_oa":false,"landing_page_url":"http://www.springer.com/engineering/mathematical/book/978-3-540-70776-9","pdf_url":null,"source":{"id":"https://openalex.org/S4306401187","display_name":"Open Research Online (The Open University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I204136569","host_organization_name":"The Open University","host_organization_lineage":["https://openalex.org/I204136569"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Book Section"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":118,"referenced_works":["https://openalex.org/W26772505","https://openalex.org/W27076413","https://openalex.org/W108101778","https://openalex.org/W139994555","https://openalex.org/W176272606","https://openalex.org/W187111067","https://openalex.org/W605575788","https://openalex.org/W1505057322","https://openalex.org/W1528758625","https://openalex.org/W1529607257","https://openalex.org/W1541931954","https://openalex.org/W1553529581","https://openalex.org/W1567787856","https://openalex.org/W1568339100","https://openalex.org/W1570542661","https://openalex.org/W1592053870","https://openalex.org/W1593657456","https://openalex.org/W1599265795","https://openalex.org/W1617571838","https://openalex.org/W1623698862","https://openalex.org/W1713855780","https://openalex.org/W1732623802","https://openalex.org/W1759990168","https://openalex.org/W1790194223","https://openalex.org/W1954715867","https://openalex.org/W1962106326","https://openalex.org/W1974093567","https://openalex.org/W1976316416","https://openalex.org/W1980127292","https://openalex.org/W1980860611","https://openalex.org/W1981933378","https://openalex.org/W1982428412","https://openalex.org/W1983453172","https://openalex.org/W1986386500","https://openalex.org/W1987146951","https://openalex.org/W1990343723","https://openalex.org/W1990549830","https://openalex.org/W1991570251","https://openalex.org/W1994306321","https://openalex.org/W1994313017","https://openalex.org/W1999117234","https://openalex.org/W2004620268","https://openalex.org/W2016928406","https://openalex.org/W2018874418","https://openalex.org/W2023736097","https://openalex.org/W2034256925","https://openalex.org/W2036565532","https://openalex.org/W2039612385","https://openalex.org/W2040223842","https://openalex.org/W2041904585","https://openalex.org/W2044420612","https://openalex.org/W2044514479","https://openalex.org/W2050006154","https://openalex.org/W2055043387","https://openalex.org/W2058856481","https://openalex.org/W2061327015","https://openalex.org/W2070127972","https://openalex.org/W2089354231","https://openalex.org/W2090248239","https://openalex.org/W2093618552","https://openalex.org/W2094591616","https://openalex.org/W2096146054","https://openalex.org/W2103017472","https://openalex.org/W2104768328","https://openalex.org/W2107344625","https://openalex.org/W2109070394","https://openalex.org/W2109098567","https://openalex.org/W2112441656","https://openalex.org/W2112454182","https://openalex.org/W2115590900","https://openalex.org/W2115880858","https://openalex.org/W2117243442","https://openalex.org/W2120361304","https://openalex.org/W2120433106","https://openalex.org/W2122904379","https://openalex.org/W2123280311","https://openalex.org/W2123500593","https://openalex.org/W2126185232","https://openalex.org/W2126276057","https://openalex.org/W2127479124","https://openalex.org/W2130260860","https://openalex.org/W2132582966","https://openalex.org/W2132773777","https://openalex.org/W2134672568","https://openalex.org/W2137881949","https://openalex.org/W2139259976","https://openalex.org/W2139563604","https://openalex.org/W2140601463","https://openalex.org/W2144001613","https://openalex.org/W2144949988","https://openalex.org/W2148853951","https://openalex.org/W2152183901","https://openalex.org/W2152698860","https://openalex.org/W2154531419","https://openalex.org/W2155723007","https://openalex.org/W2157380537","https://openalex.org/W2157870551","https://openalex.org/W2158256570","https://openalex.org/W2158505321","https://openalex.org/W2159203162","https://openalex.org/W2160238006","https://openalex.org/W2163258133","https://openalex.org/W2163980860","https://openalex.org/W2164883151","https://openalex.org/W2166337977","https://openalex.org/W2166474856","https://openalex.org/W2168808732","https://openalex.org/W2168905447","https://openalex.org/W2169974160","https://openalex.org/W2284943364","https://openalex.org/W2368874969","https://openalex.org/W2526591001","https://openalex.org/W2724881567","https://openalex.org/W3140879122","https://openalex.org/W4255855797","https://openalex.org/W4256466821","https://openalex.org/W4285227991","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2251332378","https://openalex.org/W122651434","https://openalex.org/W3004288456","https://openalex.org/W2106349067","https://openalex.org/W2016355461","https://openalex.org/W4362496998","https://openalex.org/W2184397297","https://openalex.org/W2386938185","https://openalex.org/W2798423693","https://openalex.org/W1986386500"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
