{"id":"https://openalex.org/W2264894330","doi":"https://doi.org/10.1007/978-3-540-69968-2_2","title":"Using Public Resource Computing and Systematic Pre-calculation for Large Scale Sequence Analysis","display_name":"Using Public Resource Computing and Systematic Pre-calculation for Large Scale Sequence Analysis","publication_year":2007,"publication_date":"2007-01-01","ids":{"openalex":"https://openalex.org/W2264894330","doi":"https://doi.org/10.1007/978-3-540-69968-2_2","mag":"2264894330"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-69968-2_2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-69968-2_2","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051653794","display_name":"Thomas Rattei","orcid":"https://orcid.org/0000-0002-0592-7791"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I309496635","display_name":"Weihenstephan-Triesdorf University of Applied Sciences","ror":"https://ror.org/00gzkxz88","country_code":"DE","type":"education","lineage":["https://openalex.org/I309496635"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Thomas Rattei","raw_affiliation_strings":["Department of Genome Oriented Bioinformatics, Technische Universit\u00e4t M\u00fcnchen, Wissenschaftszentrum Weihenstephan, 85350 Freising, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Genome Oriented Bioinformatics, Technische Universit\u00e4t M\u00fcnchen, Wissenschaftszentrum Weihenstephan, 85350 Freising, Germany","institution_ids":["https://openalex.org/I309496635","https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081584590","display_name":"Mathias C. Walter","orcid":"https://orcid.org/0000-0003-3012-2626"},"institutions":[{"id":"https://openalex.org/I309496635","display_name":"Weihenstephan-Triesdorf University of Applied Sciences","ror":"https://ror.org/00gzkxz88","country_code":"DE","type":"education","lineage":["https://openalex.org/I309496635"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Mathias Walter","raw_affiliation_strings":["Department of Genome Oriented Bioinformatics, Technische Universit\u00e4t M\u00fcnchen, Wissenschaftszentrum Weihenstephan, 85350 Freising, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Genome Oriented Bioinformatics, Technische Universit\u00e4t M\u00fcnchen, Wissenschaftszentrum Weihenstephan, 85350 Freising, Germany","institution_ids":["https://openalex.org/I309496635","https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016382034","display_name":"Roland Arnold","orcid":"https://orcid.org/0000-0002-7496-7578"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Roland Arnold","raw_affiliation_strings":["Institute for Bioinformatics, GSF-National Research Center for Environment and Health, Ingolst\u00e4dter Landstr. 1, 85764 Neuherberg, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Bioinformatics, GSF-National Research Center for Environment and Health, Ingolst\u00e4dter Landstr. 1, 85764 Neuherberg, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101604558","display_name":"David P. Anderson","orcid":"https://orcid.org/0000-0003-3155-7883"},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David P. Anderson","raw_affiliation_strings":["Space Sciences Laboratory, University of California, 7 Gauss Way, Berkeley, CA 94720-7450,"],"affiliations":[{"raw_affiliation_string":"Space Sciences Laboratory, University of California, 7 Gauss Way, Berkeley, CA 94720-7450,","institution_ids":["https://openalex.org/I95457486"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005241832","display_name":"Werner Mewes","orcid":null},"institutions":[{"id":"https://openalex.org/I309496635","display_name":"Weihenstephan-Triesdorf University of Applied Sciences","ror":"https://ror.org/00gzkxz88","country_code":"DE","type":"education","lineage":["https://openalex.org/I309496635"]},{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Werner Mewes","raw_affiliation_strings":["Department of Genome Oriented Bioinformatics, Technische Universit\u00e4t M\u00fcnchen, Wissenschaftszentrum Weihenstephan, 85350 Freising, Germany","Institute for Bioinformatics, GSF-National Research Center for Environment and Health, Ingolst\u00e4dter Landstr. 1, 85764 Neuherberg, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Genome Oriented Bioinformatics, Technische Universit\u00e4t M\u00fcnchen, Wissenschaftszentrum Weihenstephan, 85350 Freising, Germany","institution_ids":["https://openalex.org/I309496635","https://openalex.org/I62916508"]},{"raw_affiliation_string":"Institute for Bioinformatics, GSF-National Research Center for Environment and Health, Ingolst\u00e4dter Landstr. 1, 85764 Neuherberg, Germany","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5051653794"],"corresponding_institution_ids":["https://openalex.org/I309496635","https://openalex.org/I62916508"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.6456,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.85444234,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"11","last_page":"18"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.984499990940094,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9645000100135803,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7552220225334167},{"id":"https://openalex.org/keywords/usability","display_name":"Usability","score":0.7403435707092285},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.6800620555877686},{"id":"https://openalex.org/keywords/grid-computing","display_name":"Grid computing","score":0.6278297901153564},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.5329101085662842},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.46476683020591736},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.4425654411315918},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.4290151298046112},{"id":"https://openalex.org/keywords/homology","display_name":"Homology (biology)","score":0.4151361584663391},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.38366588950157166},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.3269934058189392},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.12688645720481873},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10675862431526184},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.08256611227989197}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7552220225334167},{"id":"https://openalex.org/C170130773","wikidata":"https://www.wikidata.org/wiki/Q216378","display_name":"Usability","level":2,"score":0.7403435707092285},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.6800620555877686},{"id":"https://openalex.org/C70429105","wikidata":"https://www.wikidata.org/wiki/Q249999","display_name":"Grid computing","level":3,"score":0.6278297901153564},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.5329101085662842},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.46476683020591736},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.4425654411315918},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.4290151298046112},{"id":"https://openalex.org/C165525559","wikidata":"https://www.wikidata.org/wiki/Q224180","display_name":"Homology (biology)","level":3,"score":0.4151361584663391},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.38366588950157166},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.3269934058189392},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.12688645720481873},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10675862431526184},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.08256611227989197},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-540-69968-2_2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-69968-2_2","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/915d0330-28cd-4a2c-98e9-8874bdefa572","is_oa":false,"landing_page_url":"https://research.birmingham.ac.uk/en/publications/915d0330-28cd-4a2c-98e9-8874bdefa572","pdf_url":null,"source":{"id":"https://openalex.org/S4306402634","display_name":"University of Birmingham Research Portal (University of Birmingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I79619799","host_organization_name":"University of Birmingham","host_organization_lineage":["https://openalex.org/I79619799"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Rattei, T, Walter, M, Arnold, R, Anderson, D P & Mewes, W 2007, Using Public Resource Computing and Systematic Pre-calculation for Large Scale Sequence Analysis. in W Dubitzky, A Schuster, P M A Sloot, M Schroeder & M Romberg (eds), Distributed, High-Performance and Grid Computing in Computational Biology., Chapter 2, Springer, pp. 11-18. https://doi.org/10.1007/978-3-540-69968-2_2","raw_type":"bookPart"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W53898165","https://openalex.org/W2055043387","https://openalex.org/W2074231493","https://openalex.org/W2087064593","https://openalex.org/W2089499735","https://openalex.org/W2116999639","https://openalex.org/W2119195082"],"related_works":["https://openalex.org/W2187546663","https://openalex.org/W2429057255","https://openalex.org/W148745890","https://openalex.org/W2899790217","https://openalex.org/W1576092969","https://openalex.org/W4315621326","https://openalex.org/W2598865957","https://openalex.org/W2524154428","https://openalex.org/W2959940981","https://openalex.org/W1522590096"],"abstract_inverted_index":null,"counts_by_year":[{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
