{"id":"https://openalex.org/W1555489456","doi":"https://doi.org/10.1007/978-3-540-48540-7_18","title":"Annotation of Promoter Regions in Microbial Genomes Based on DNA Structural and Sequence Properties","display_name":"Annotation of Promoter Regions in Microbial Genomes Based on DNA Structural and Sequence Properties","publication_year":2007,"publication_date":"2007-01-01","ids":{"openalex":"https://openalex.org/W1555489456","doi":"https://doi.org/10.1007/978-3-540-48540-7_18","mag":"1555489456"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-48540-7_18","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-48540-7_18","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5108106064","display_name":"Huiquan Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I84218800","display_name":"University of California, Davis","ror":"https://ror.org/05rrcem69","country_code":"US","type":"education","lineage":["https://openalex.org/I84218800"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Huiquan Wang","raw_affiliation_strings":["UC Davis Genome Center, University of California, One Shields Avenue, Davis, CA 95616,","UC Davis Genome Center, University of California, Davis, CA"],"affiliations":[{"raw_affiliation_string":"UC Davis Genome Center, University of California, One Shields Avenue, Davis, CA 95616,","institution_ids":["https://openalex.org/I84218800"]},{"raw_affiliation_string":"UC Davis Genome Center, University of California, Davis, CA","institution_ids":["https://openalex.org/I84218800"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025935554","display_name":"Craig J. Benham","orcid":"https://orcid.org/0009-0005-4610-2402"},"institutions":[{"id":"https://openalex.org/I84218800","display_name":"University of California, Davis","ror":"https://ror.org/05rrcem69","country_code":"US","type":"education","lineage":["https://openalex.org/I84218800"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Craig J. Benham","raw_affiliation_strings":["UC Davis Genome Center, University of California, One Shields Avenue, Davis, CA 95616,","UC Davis Genome Center, University of California, Davis, CA"],"affiliations":[{"raw_affiliation_string":"UC Davis Genome Center, University of California, One Shields Avenue, Davis, CA 95616,","institution_ids":["https://openalex.org/I84218800"]},{"raw_affiliation_string":"UC Davis Genome Center, University of California, Davis, CA","institution_ids":["https://openalex.org/I84218800"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5108106064"],"corresponding_institution_ids":["https://openalex.org/I84218800"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.11780375,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"212","last_page":"224"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.6792190074920654},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6734450459480286},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6347509622573853},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6272455453872681},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.6003316044807434},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.587049126625061},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.5309082269668579},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.5094113945960999},{"id":"https://openalex.org/keywords/bacillus-subtilis","display_name":"Bacillus subtilis","score":0.5020065307617188},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.48817020654678345},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.09141501784324646},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.0727299153804779}],"concepts":[{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.6792190074920654},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6734450459480286},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6347509622573853},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6272455453872681},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6003316044807434},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.587049126625061},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.5309082269668579},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.5094113945960999},{"id":"https://openalex.org/C2777272437","wikidata":"https://www.wikidata.org/wiki/Q131238","display_name":"Bacillus subtilis","level":3,"score":0.5020065307617188},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.48817020654678345},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09141501784324646},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.0727299153804779}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-48540-7_18","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-48540-7_18","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.5600000023841858},{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.4399999976158142}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1580341506","https://openalex.org/W1713210353","https://openalex.org/W1825157170","https://openalex.org/W1964379758","https://openalex.org/W1969712308","https://openalex.org/W1971268821","https://openalex.org/W1995875735","https://openalex.org/W2002987624","https://openalex.org/W2005738732","https://openalex.org/W2009570821","https://openalex.org/W2011952909","https://openalex.org/W2018527742","https://openalex.org/W2034013107","https://openalex.org/W2035009245","https://openalex.org/W2068825915","https://openalex.org/W2071321615","https://openalex.org/W2071424950","https://openalex.org/W2074662966","https://openalex.org/W2075793022","https://openalex.org/W2095994064","https://openalex.org/W2112440119","https://openalex.org/W2114624600","https://openalex.org/W2117357746","https://openalex.org/W2128353077","https://openalex.org/W2133253129","https://openalex.org/W2135995702","https://openalex.org/W2139516179","https://openalex.org/W2152824658","https://openalex.org/W2167708455","https://openalex.org/W2993383518","https://openalex.org/W4245668478","https://openalex.org/W4298870207"],"related_works":["https://openalex.org/W4293061103","https://openalex.org/W3041516390","https://openalex.org/W1548672655","https://openalex.org/W3025683560","https://openalex.org/W2301778769","https://openalex.org/W4238511776","https://openalex.org/W2359352982","https://openalex.org/W2758340467","https://openalex.org/W2354946010","https://openalex.org/W2382107673"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
