{"id":"https://openalex.org/W2115258678","doi":"https://doi.org/10.1007/978-3-540-32003-6_2","title":"A Fuzzy Viterbi Algorithm for Improved Sequence Alignment and Searching of Proteins","display_name":"A Fuzzy Viterbi Algorithm for Improved Sequence Alignment and Searching of Proteins","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W2115258678","doi":"https://doi.org/10.1007/978-3-540-32003-6_2","mag":"2115258678"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-32003-6_2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-32003-6_2","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061314186","display_name":"Niranjan Bidargaddi","orcid":"https://orcid.org/0000-0003-2868-9260"},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"N. P. Bidargaddi","raw_affiliation_strings":["Gippsland School of Computing and Information Technology, Monash University, Gippsland campus, Vic, 3842, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Gippsland School of Computing and Information Technology, Monash University, Gippsland campus, Vic, 3842, Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070425791","display_name":"Madhu Chetty","orcid":"https://orcid.org/0000-0001-7052-0413"},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"M Chetty","raw_affiliation_strings":["Gippsland School of Computing and Information Technology, Monash University, Gippsland campus, Vic, 3842, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Gippsland School of Computing and Information Technology, Monash University, Gippsland campus, Vic, 3842, Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013199739","display_name":"Joarder Kamruzzaman","orcid":"https://orcid.org/0000-0002-3748-0277"},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"J Kamruzzaman","raw_affiliation_strings":["Gippsland School of Computing and Information Technology, Monash University, Gippsland campus, Vic, 3842, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Gippsland School of Computing and Information Technology, Monash University, Gippsland campus, Vic, 3842, Australia","institution_ids":["https://openalex.org/I56590836"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I56590836"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":2.9393,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.90568219,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"11","last_page":"21"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/viterbi-algorithm","display_name":"Viterbi algorithm","score":0.9386036992073059},{"id":"https://openalex.org/keywords/hidden-markov-model","display_name":"Hidden Markov model","score":0.714499831199646},{"id":"https://openalex.org/keywords/soft-output-viterbi-algorithm","display_name":"Soft output Viterbi algorithm","score":0.6798185706138611},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6054489612579346},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5793980956077576},{"id":"https://openalex.org/keywords/fuzzy-logic","display_name":"Fuzzy logic","score":0.5726349949836731},{"id":"https://openalex.org/keywords/forward-algorithm","display_name":"Forward algorithm","score":0.5530149936676025},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5404534935951233},{"id":"https://openalex.org/keywords/markov-chain","display_name":"Markov chain","score":0.5216298699378967},{"id":"https://openalex.org/keywords/iterative-viterbi-decoding","display_name":"Iterative Viterbi decoding","score":0.4640343189239502},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.45454663038253784},{"id":"https://openalex.org/keywords/viterbi-decoder","display_name":"Viterbi decoder","score":0.4494117498397827},{"id":"https://openalex.org/keywords/search-algorithm","display_name":"Search algorithm","score":0.41031593084335327},{"id":"https://openalex.org/keywords/markov-model","display_name":"Markov model","score":0.3904261589050293},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3795207738876343},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.16574588418006897},{"id":"https://openalex.org/keywords/variable-order-markov-model","display_name":"Variable-order Markov model","score":0.1518695056438446},{"id":"https://openalex.org/keywords/decoding-methods","display_name":"Decoding methods","score":0.07754167914390564},{"id":"https://openalex.org/keywords/sequential-decoding","display_name":"Sequential decoding","score":0.06933647394180298}],"concepts":[{"id":"https://openalex.org/C60582962","wikidata":"https://www.wikidata.org/wiki/Q83886","display_name":"Viterbi algorithm","level":3,"score":0.9386036992073059},{"id":"https://openalex.org/C23224414","wikidata":"https://www.wikidata.org/wiki/Q176769","display_name":"Hidden Markov model","level":2,"score":0.714499831199646},{"id":"https://openalex.org/C130319729","wikidata":"https://www.wikidata.org/wiki/Q83886","display_name":"Soft output Viterbi algorithm","level":5,"score":0.6798185706138611},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6054489612579346},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5793980956077576},{"id":"https://openalex.org/C58166","wikidata":"https://www.wikidata.org/wiki/Q224821","display_name":"Fuzzy logic","level":2,"score":0.5726349949836731},{"id":"https://openalex.org/C196455857","wikidata":"https://www.wikidata.org/wiki/Q5473264","display_name":"Forward algorithm","level":5,"score":0.5530149936676025},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5404534935951233},{"id":"https://openalex.org/C98763669","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov chain","level":2,"score":0.5216298699378967},{"id":"https://openalex.org/C113638808","wikidata":"https://www.wikidata.org/wiki/Q6094410","display_name":"Iterative Viterbi decoding","level":5,"score":0.4640343189239502},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.45454663038253784},{"id":"https://openalex.org/C117379686","wikidata":"https://www.wikidata.org/wiki/Q6996459","display_name":"Viterbi decoder","level":3,"score":0.4494117498397827},{"id":"https://openalex.org/C125583679","wikidata":"https://www.wikidata.org/wiki/Q755673","display_name":"Search algorithm","level":2,"score":0.41031593084335327},{"id":"https://openalex.org/C163836022","wikidata":"https://www.wikidata.org/wiki/Q6771326","display_name":"Markov model","level":3,"score":0.3904261589050293},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3795207738876343},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.16574588418006897},{"id":"https://openalex.org/C54907487","wikidata":"https://www.wikidata.org/wiki/Q7915688","display_name":"Variable-order Markov model","level":4,"score":0.1518695056438446},{"id":"https://openalex.org/C57273362","wikidata":"https://www.wikidata.org/wiki/Q576722","display_name":"Decoding methods","level":2,"score":0.07754167914390564},{"id":"https://openalex.org/C193969084","wikidata":"https://www.wikidata.org/wiki/Q7452500","display_name":"Sequential decoding","level":4,"score":0.06933647394180298},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C157125643","wikidata":"https://www.wikidata.org/wiki/Q884707","display_name":"Block code","level":3,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-32003-6_2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-32003-6_2","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W135322425","https://openalex.org/W165129094","https://openalex.org/W294994052","https://openalex.org/W621724833","https://openalex.org/W1493951357","https://openalex.org/W1546420309","https://openalex.org/W1556265791","https://openalex.org/W1558136956","https://openalex.org/W1903315691","https://openalex.org/W1969051510","https://openalex.org/W1971912858","https://openalex.org/W1982505048","https://openalex.org/W2009570821","https://openalex.org/W2056619794","https://openalex.org/W2099946731","https://openalex.org/W2108401170","https://openalex.org/W2111448578","https://openalex.org/W2112351417","https://openalex.org/W2129448726","https://openalex.org/W2141885858","https://openalex.org/W2151831732","https://openalex.org/W2332022662"],"related_works":["https://openalex.org/W3096277017","https://openalex.org/W1915619113","https://openalex.org/W2062804535","https://openalex.org/W2544568790","https://openalex.org/W2790444905","https://openalex.org/W4232476001","https://openalex.org/W2783469447","https://openalex.org/W2146383045","https://openalex.org/W2143297499","https://openalex.org/W2073817053"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
