{"id":"https://openalex.org/W1542692604","doi":"https://doi.org/10.1007/978-3-540-30501-9_2","title":"Parallel Computing Platform for the Agent-Based Modeling of Multicellular Biological Systems","display_name":"Parallel Computing Platform for the Agent-Based Modeling of Multicellular Biological Systems","publication_year":2004,"publication_date":"2004-01-01","ids":{"openalex":"https://openalex.org/W1542692604","doi":"https://doi.org/10.1007/978-3-540-30501-9_2","mag":"1542692604"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-30501-9_2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-30501-9_2","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073497355","display_name":"Toh Da-Jun","orcid":null},"institutions":[{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Toh Da-Jun","raw_affiliation_strings":["Bioinformatics Institute, Matrix L7, 30 Biopolis St, Singapore"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute, Matrix L7, 30 Biopolis St, Singapore","institution_ids":["https://openalex.org/I4210148498"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111401075","display_name":"Francis Tang","orcid":null},"institutions":[{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Francis Tang","raw_affiliation_strings":["Bioinformatics Institute, Matrix L7, 30 Biopolis St, Singapore"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute, Matrix L7, 30 Biopolis St, Singapore","institution_ids":["https://openalex.org/I4210148498"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076681612","display_name":"Travis Lee","orcid":"https://orcid.org/0000-0002-8352-8956"},"institutions":[{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Travis Lee","raw_affiliation_strings":["Bioinformatics Institute, Matrix L7, 30 Biopolis St, Singapore"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute, Matrix L7, 30 Biopolis St, Singapore","institution_ids":["https://openalex.org/I4210148498"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112803212","display_name":"Deepak Sarda","orcid":null},"institutions":[{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Deepak Sarda","raw_affiliation_strings":["Bioinformatics Institute, Matrix L7, 30 Biopolis St, Singapore"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute, Matrix L7, 30 Biopolis St, Singapore","institution_ids":["https://openalex.org/I4210148498"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005224523","display_name":"Arun V. Krishnan","orcid":"https://orcid.org/0000-0001-8883-8825"},"institutions":[{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Arun Krishnan","raw_affiliation_strings":["Bioinformatics Institute, Matrix L7, 30 Biopolis St, Singapore"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute, Matrix L7, 30 Biopolis St, Singapore","institution_ids":["https://openalex.org/I4210148498"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075238401","display_name":"Andrew B. Goryachev","orcid":"https://orcid.org/0000-0002-1332-4819"},"institutions":[{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Andrew Goryachev","raw_affiliation_strings":["Bioinformatics Institute, Matrix L7, 30 Biopolis St, Singapore"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute, Matrix L7, 30 Biopolis St, Singapore","institution_ids":["https://openalex.org/I4210148498"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5073497355"],"corresponding_institution_ids":["https://openalex.org/I4210148498"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.451,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.8288467,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"5","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.984499990940094,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9621999859809875,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8516173958778381},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.7625224590301514},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.7586323618888855},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.7244162559509277},{"id":"https://openalex.org/keywords/multicellular-organism","display_name":"Multicellular organism","score":0.5926693677902222},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.47429707646369934},{"id":"https://openalex.org/keywords/load-balancing","display_name":"Load balancing (electrical power)","score":0.46640506386756897},{"id":"https://openalex.org/keywords/cluster","display_name":"Cluster (spacecraft)","score":0.41131314635276794},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.4006030261516571},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.32649368047714233},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.12815171480178833}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8516173958778381},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.7625224590301514},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.7586323618888855},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.7244162559509277},{"id":"https://openalex.org/C74318829","wikidata":"https://www.wikidata.org/wiki/Q36458","display_name":"Multicellular organism","level":3,"score":0.5926693677902222},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.47429707646369934},{"id":"https://openalex.org/C138959212","wikidata":"https://www.wikidata.org/wiki/Q1806783","display_name":"Load balancing (electrical power)","level":3,"score":0.46640506386756897},{"id":"https://openalex.org/C164866538","wikidata":"https://www.wikidata.org/wiki/Q367351","display_name":"Cluster (spacecraft)","level":2,"score":0.41131314635276794},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.4006030261516571},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.32649368047714233},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.12815171480178833},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-540-30501-9_2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-30501-9_2","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.462.4136","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.462.4136","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.bii.a-star.edu.sg/docs/publications/andrewg/sscs04.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":4,"referenced_works":["https://openalex.org/W2005845593","https://openalex.org/W2108896820","https://openalex.org/W2138493446","https://openalex.org/W4250716583"],"related_works":["https://openalex.org/W2380023786","https://openalex.org/W1596201972","https://openalex.org/W2075133328","https://openalex.org/W1588015694","https://openalex.org/W1986253068","https://openalex.org/W1967954938","https://openalex.org/W1513409726","https://openalex.org/W1547595128","https://openalex.org/W2385763152","https://openalex.org/W2546696010"],"abstract_inverted_index":null,"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
