{"id":"https://openalex.org/W1506816222","doi":"https://doi.org/10.1007/978-3-540-30219-3_26","title":"A Faster and More Space-Efficient Algorithm for Inferring Arc-Annotations of RNA Sequences Through Alignment","display_name":"A Faster and More Space-Efficient Algorithm for Inferring Arc-Annotations of RNA Sequences Through Alignment","publication_year":2004,"publication_date":"2004-01-01","ids":{"openalex":"https://openalex.org/W1506816222","doi":"https://doi.org/10.1007/978-3-540-30219-3_26","mag":"1506816222"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-30219-3_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-30219-3_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060626918","display_name":"Jesper Jansson","orcid":"https://orcid.org/0000-0001-6859-8932"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Jesper Jansson","raw_affiliation_strings":["Department of Computer Science, National University of Singapore, 3 Science Drive 2, Singapore, 117543"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, National University of Singapore, 3 Science Drive 2, Singapore, 117543","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110918847","display_name":"See Kiong Ng","orcid":null},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"See-Kiong Ng","raw_affiliation_strings":["Institute for Infocomm Research, 21 Heng Mui Keng Terrace, Singapore"],"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, 21 Heng Mui Keng Terrace, Singapore","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012563463","display_name":"Wing\u2010Kin Sung","orcid":"https://orcid.org/0000-0001-7806-7086"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Wing-Kin Sung","raw_affiliation_strings":["Department of Computer Science, National University of Singapore, 3 Science Drive 2, Singapore, 117543"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, National University of Singapore, 3 Science Drive 2, Singapore, 117543","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064706181","display_name":"Hugo Willy","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Hugo Willy","raw_affiliation_strings":["Department of Computer Science, National University of Singapore, 3 Science Drive 2, Singapore, 117543"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, National University of Singapore, 3 Science Drive 2, Singapore, 117543","institution_ids":["https://openalex.org/I165932596"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5060626918"],"corresponding_institution_ids":["https://openalex.org/I165932596"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.9671,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.77129092,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"302","last_page":"313"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.8047110438346863},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.7046089172363281},{"id":"https://openalex.org/keywords/arc","display_name":"Arc (geometry)","score":0.6312227249145508},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6007601022720337},{"id":"https://openalex.org/keywords/dynamic-programming","display_name":"Dynamic programming","score":0.5552852153778076},{"id":"https://openalex.org/keywords/time-complexity","display_name":"Time complexity","score":0.46959057450294495},{"id":"https://openalex.org/keywords/space","display_name":"Space (punctuation)","score":0.46541428565979004},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.27872782945632935},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.05992397665977478}],"concepts":[{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.8047110438346863},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.7046089172363281},{"id":"https://openalex.org/C83415579","wikidata":"https://www.wikidata.org/wiki/Q161973","display_name":"Arc (geometry)","level":2,"score":0.6312227249145508},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6007601022720337},{"id":"https://openalex.org/C37404715","wikidata":"https://www.wikidata.org/wiki/Q380679","display_name":"Dynamic programming","level":2,"score":0.5552852153778076},{"id":"https://openalex.org/C311688","wikidata":"https://www.wikidata.org/wiki/Q2393193","display_name":"Time complexity","level":2,"score":0.46959057450294495},{"id":"https://openalex.org/C2778572836","wikidata":"https://www.wikidata.org/wiki/Q380933","display_name":"Space (punctuation)","level":2,"score":0.46541428565979004},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.27872782945632935},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.05992397665977478},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-540-30219-3_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-30219-3_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:scholarbank.nus.edu.sg:10635/39364","is_oa":false,"landing_page_url":"http://scholarbank.nus.edu.sg/handle/10635/39364","pdf_url":null,"source":{"id":"https://openalex.org/S7407052290","display_name":"National University of Singapore","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Scopus","raw_type":"Article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.332.4030","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.332.4030","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.df.lth.se/~jj/Publications/WLCS-conf05_WABI2004.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W155288729","https://openalex.org/W165213868","https://openalex.org/W1513047926","https://openalex.org/W1537127938","https://openalex.org/W1570126464","https://openalex.org/W1574721051","https://openalex.org/W1600401233","https://openalex.org/W1756652108","https://openalex.org/W1902180264","https://openalex.org/W1971988254","https://openalex.org/W1993968482","https://openalex.org/W2000191287","https://openalex.org/W2025763720","https://openalex.org/W2028639276","https://openalex.org/W2067194564","https://openalex.org/W2099650196","https://openalex.org/W2125498037","https://openalex.org/W2140213100","https://openalex.org/W2145353175","https://openalex.org/W2158534304","https://openalex.org/W2162744351","https://openalex.org/W3023697611","https://openalex.org/W4231391517","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2544839741","https://openalex.org/W2810064750","https://openalex.org/W3036572561","https://openalex.org/W1885735754","https://openalex.org/W2515218844","https://openalex.org/W3045564025","https://openalex.org/W1965970232","https://openalex.org/W2033676320","https://openalex.org/W2113303931","https://openalex.org/W1603542022"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
