{"id":"https://openalex.org/W1558586321","doi":"https://doi.org/10.1007/978-3-540-30219-3_13","title":"Searching for Regulatory Elements of Alternative Splicing Events Using Phylogenetic Footprinting","display_name":"Searching for Regulatory Elements of Alternative Splicing Events Using Phylogenetic Footprinting","publication_year":2004,"publication_date":"2004-01-01","ids":{"openalex":"https://openalex.org/W1558586321","doi":"https://doi.org/10.1007/978-3-540-30219-3_13","mag":"1558586321"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-30219-3_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-30219-3_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053070089","display_name":"Daichi Shigemizu","orcid":"https://orcid.org/0000-0002-4412-0552"},"institutions":[{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Daichi Shigemizu","raw_affiliation_strings":["Graduate School of Systems Life Sciences, Kyushu University, Fukuoka, Japan","Kyushu University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Systems Life Sciences, Kyushu University, Fukuoka, Japan","institution_ids":["https://openalex.org/I135598925"]},{"raw_affiliation_string":"Kyushu University","institution_ids":["https://openalex.org/I135598925"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035228232","display_name":"Osamu Maruyama","orcid":"https://orcid.org/0000-0002-5760-1507"},"institutions":[{"id":"https://openalex.org/I135598925","display_name":"Kyushu University","ror":"https://ror.org/00p4k0j84","country_code":"JP","type":"education","lineage":["https://openalex.org/I135598925"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Osamu Maruyama","raw_affiliation_strings":["Faculty of Mathematics, Kyushu University, Fukuoka, Japan","Kyushu University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Mathematics, Kyushu University, Fukuoka, Japan","institution_ids":["https://openalex.org/I135598925"]},{"raw_affiliation_string":"Kyushu University","institution_ids":["https://openalex.org/I135598925"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I135598925"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"147","last_page":"158"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/substring","display_name":"Substring","score":0.798166036605835},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.7577368021011353},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5525399446487427},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5360856652259827},{"id":"https://openalex.org/keywords/footprinting","display_name":"Footprinting","score":0.535460889339447},{"id":"https://openalex.org/keywords/alternative-splicing","display_name":"Alternative splicing","score":0.5036954283714294},{"id":"https://openalex.org/keywords/phylogenetic-network","display_name":"Phylogenetic network","score":0.47946465015411377},{"id":"https://openalex.org/keywords/homo-sapiens","display_name":"Homo sapiens","score":0.4786061942577362},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4766572117805481},{"id":"https://openalex.org/keywords/exon","display_name":"Exon","score":0.44650861620903015},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4450763165950775},{"id":"https://openalex.org/keywords/rna-splicing","display_name":"RNA splicing","score":0.4402189552783966},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.21759039163589478},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.08854329586029053},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.061871081590652466},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.05652281641960144}],"concepts":[{"id":"https://openalex.org/C182407805","wikidata":"https://www.wikidata.org/wiki/Q2626534","display_name":"Substring","level":3,"score":0.798166036605835},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.7577368021011353},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5525399446487427},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5360856652259827},{"id":"https://openalex.org/C2778021871","wikidata":"https://www.wikidata.org/wiki/Q648006","display_name":"Footprinting","level":4,"score":0.535460889339447},{"id":"https://openalex.org/C194583182","wikidata":"https://www.wikidata.org/wiki/Q21114084","display_name":"Alternative splicing","level":4,"score":0.5036954283714294},{"id":"https://openalex.org/C26619641","wikidata":"https://www.wikidata.org/wiki/Q3142246","display_name":"Phylogenetic network","level":4,"score":0.47946465015411377},{"id":"https://openalex.org/C2777938546","wikidata":"https://www.wikidata.org/wiki/Q5","display_name":"Homo sapiens","level":2,"score":0.4786061942577362},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4766572117805481},{"id":"https://openalex.org/C36823959","wikidata":"https://www.wikidata.org/wiki/Q373027","display_name":"Exon","level":3,"score":0.44650861620903015},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4450763165950775},{"id":"https://openalex.org/C54458228","wikidata":"https://www.wikidata.org/wiki/Q237218","display_name":"RNA splicing","level":4,"score":0.4402189552783966},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.21759039163589478},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.08854329586029053},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.061871081590652466},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.05652281641960144},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-30219-3_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-30219-3_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Life in Land","score":0.5799999833106995,"id":"https://metadata.un.org/sdg/15"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1481278428","https://openalex.org/W1967618835","https://openalex.org/W1970774008","https://openalex.org/W1974614108","https://openalex.org/W1987418027","https://openalex.org/W2025055572","https://openalex.org/W2034206030","https://openalex.org/W2067501355","https://openalex.org/W2072088482","https://openalex.org/W2104565621","https://openalex.org/W2106882534","https://openalex.org/W2141395444","https://openalex.org/W2143176671","https://openalex.org/W2154139219","https://openalex.org/W2163570826","https://openalex.org/W2167188257","https://openalex.org/W4229899734","https://openalex.org/W4248242635"],"related_works":["https://openalex.org/W1583922594","https://openalex.org/W1974038726","https://openalex.org/W1953626159","https://openalex.org/W2998448420","https://openalex.org/W1598224733","https://openalex.org/W4304731099","https://openalex.org/W4280502676","https://openalex.org/W2000769876","https://openalex.org/W2120581723","https://openalex.org/W2027598280"],"abstract_inverted_index":null,"counts_by_year":[{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
