{"id":"https://openalex.org/W1536400206","doi":"https://doi.org/10.1007/978-3-540-30133-2_42","title":"Extracting Biochemical Reaction Kinetics from Time Series Data","display_name":"Extracting Biochemical Reaction Kinetics from Time Series Data","publication_year":2004,"publication_date":"2004-01-01","ids":{"openalex":"https://openalex.org/W1536400206","doi":"https://doi.org/10.1007/978-3-540-30133-2_42","mag":"1536400206"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-30133-2_42","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-30133-2_42","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083478373","display_name":"Edmund J. Crampin","orcid":"https://orcid.org/0000-0001-6569-9543"},"institutions":[{"id":"https://openalex.org/I154130895","display_name":"University of Auckland","ror":"https://ror.org/03b94tp07","country_code":"NZ","type":"education","lineage":["https://openalex.org/I154130895"]}],"countries":["NZ"],"is_corresponding":true,"raw_author_name":"Edmund J. Crampin","raw_affiliation_strings":["Bioengineering Institute, The University of Auckland, Private Bag 92019, Auckland, New Zealand"],"affiliations":[{"raw_affiliation_string":"Bioengineering Institute, The University of Auckland, Private Bag 92019, Auckland, New Zealand","institution_ids":["https://openalex.org/I154130895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053305605","display_name":"Patrick McSharry","orcid":"https://orcid.org/0000-0003-4663-970X"},"institutions":[{"id":"https://openalex.org/I40120149","display_name":"University of Oxford","ror":"https://ror.org/052gg0110","country_code":"GB","type":"education","lineage":["https://openalex.org/I40120149"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Patrick E. McSharry","raw_affiliation_strings":["Department of Engineering Science, University of Oxford, Parks Road, Oxford, OX1 3PJ, UK","Mathematical Institute, 24\u201329 St Giles\u2019, Oxford, OX1 3LB, UK","Mathematical Institute, 24\u201329 St Giles', Oxford, OX1 3LB, UK"],"affiliations":[{"raw_affiliation_string":"Department of Engineering Science, University of Oxford, Parks Road, Oxford, OX1 3PJ, UK","institution_ids":["https://openalex.org/I40120149"]},{"raw_affiliation_string":"Mathematical Institute, 24\u201329 St Giles\u2019, Oxford, OX1 3LB, UK","institution_ids":[]},{"raw_affiliation_string":"Mathematical Institute, 24\u201329 St Giles', Oxford, OX1 3LB, UK","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5037782401","display_name":"Santiago Schnell","orcid":"https://orcid.org/0000-0002-9477-3914"},"institutions":[{"id":"https://openalex.org/I119474363","display_name":"Canterbury Christ Church University","ror":"https://ror.org/0489ggv38","country_code":"GB","type":"education","lineage":["https://openalex.org/I119474363"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Santiago Schnell","raw_affiliation_strings":["Centre for Mathematical Biology, Mathematical Institute, 24\u201329 St Giles\u2019, Oxford, OX1 3LB, UK","Christ Church, Oxford, OX1 1DP, UK","Centre for Mathematical Biology, Mathematical Institute, 24\u201329 St Giles', Oxford, OX1 3LB, UK"],"affiliations":[{"raw_affiliation_string":"Centre for Mathematical Biology, Mathematical Institute, 24\u201329 St Giles\u2019, Oxford, OX1 3LB, UK","institution_ids":[]},{"raw_affiliation_string":"Christ Church, Oxford, OX1 1DP, UK","institution_ids":["https://openalex.org/I119474363"]},{"raw_affiliation_string":"Centre for Mathematical Biology, Mathematical Institute, 24\u201329 St Giles', Oxford, OX1 3LB, UK","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5083478373"],"corresponding_institution_ids":["https://openalex.org/I154130895"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.9351,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.86137491,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"329","last_page":"336"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9921000003814697,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9921000003814697,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9769999980926514,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9742000102996826,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7870466709136963},{"id":"https://openalex.org/keywords/a-priori-and-a-posteriori","display_name":"A priori and a posteriori","score":0.7428598999977112},{"id":"https://openalex.org/keywords/series","display_name":"Series (stratigraphy)","score":0.6535208821296692},{"id":"https://openalex.org/keywords/chemical-kinetics","display_name":"Chemical kinetics","score":0.5624604821205139},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5224365592002869},{"id":"https://openalex.org/keywords/time-series","display_name":"Time series","score":0.493021696805954},{"id":"https://openalex.org/keywords/kinetics","display_name":"Kinetics","score":0.4593726396560669},{"id":"https://openalex.org/keywords/nonlinear-system","display_name":"Nonlinear system","score":0.4471460282802582},{"id":"https://openalex.org/keywords/elementary-reaction","display_name":"Elementary reaction","score":0.4355596601963043},{"id":"https://openalex.org/keywords/chemical-reaction","display_name":"Chemical reaction","score":0.4288049042224884},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.41940200328826904},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.41676443815231323},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4097399115562439},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.38163426518440247},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2794467806816101},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.20721453428268433},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.16924116015434265}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7870466709136963},{"id":"https://openalex.org/C75553542","wikidata":"https://www.wikidata.org/wiki/Q178161","display_name":"A priori and a posteriori","level":2,"score":0.7428598999977112},{"id":"https://openalex.org/C143724316","wikidata":"https://www.wikidata.org/wiki/Q312468","display_name":"Series (stratigraphy)","level":2,"score":0.6535208821296692},{"id":"https://openalex.org/C36663273","wikidata":"https://www.wikidata.org/wiki/Q209082","display_name":"Chemical kinetics","level":3,"score":0.5624604821205139},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5224365592002869},{"id":"https://openalex.org/C151406439","wikidata":"https://www.wikidata.org/wiki/Q186588","display_name":"Time series","level":2,"score":0.493021696805954},{"id":"https://openalex.org/C148898269","wikidata":"https://www.wikidata.org/wiki/Q1108792","display_name":"Kinetics","level":2,"score":0.4593726396560669},{"id":"https://openalex.org/C158622935","wikidata":"https://www.wikidata.org/wiki/Q660848","display_name":"Nonlinear system","level":2,"score":0.4471460282802582},{"id":"https://openalex.org/C8265204","wikidata":"https://www.wikidata.org/wiki/Q845117","display_name":"Elementary reaction","level":3,"score":0.4355596601963043},{"id":"https://openalex.org/C177801218","wikidata":"https://www.wikidata.org/wiki/Q36534","display_name":"Chemical reaction","level":2,"score":0.4288049042224884},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.41940200328826904},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.41676443815231323},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4097399115562439},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.38163426518440247},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2794467806816101},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.20721453428268433},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.16924116015434265},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-30133-2_42","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-30133-2_42","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W1482701468","https://openalex.org/W1517729176","https://openalex.org/W1530704185","https://openalex.org/W1556001544","https://openalex.org/W1969135035","https://openalex.org/W1982258483","https://openalex.org/W2008933319","https://openalex.org/W2017085933","https://openalex.org/W2025299343","https://openalex.org/W2034099719","https://openalex.org/W2074493412","https://openalex.org/W2075665712","https://openalex.org/W2142635246","https://openalex.org/W2149325066","https://openalex.org/W2165603655","https://openalex.org/W2170120409","https://openalex.org/W2188219490","https://openalex.org/W2587821215","https://openalex.org/W2737500437","https://openalex.org/W4249543038","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W4245806825","https://openalex.org/W1535232288","https://openalex.org/W2093505594","https://openalex.org/W171001695","https://openalex.org/W4214586474","https://openalex.org/W2477184864","https://openalex.org/W622069218","https://openalex.org/W2025752795","https://openalex.org/W72604227","https://openalex.org/W3100853314"],"abstract_inverted_index":null,"counts_by_year":[{"year":2016,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}