{"id":"https://openalex.org/W1512469972","doi":"https://doi.org/10.1007/978-3-540-30075-5_75","title":"Ontology-Driven Workflow Management for Biosequence Processing Systems","display_name":"Ontology-Driven Workflow Management for Biosequence Processing Systems","publication_year":2004,"publication_date":"2004-01-01","ids":{"openalex":"https://openalex.org/W1512469972","doi":"https://doi.org/10.1007/978-3-540-30075-5_75","mag":"1512469972"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-540-30075-5_75","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-30075-5_75","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5104274791","display_name":"Melissa Lemos","orcid":null},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Melissa Lemos","raw_affiliation_strings":["Department of Informatics, Pontifical Catholic University of Rio de Janeiro, Brazil, Rua Marqu\u00eas de S. Vicente, 225, Rio de Janeiro, RJ, Brazil, CEP 22453-900"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Pontifical Catholic University of Rio de Janeiro, Brazil, Rua Marqu\u00eas de S. Vicente, 225, Rio de Janeiro, RJ, Brazil, CEP 22453-900","institution_ids":["https://openalex.org/I2699952"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077506036","display_name":"Marco A. Casanova","orcid":"https://orcid.org/0000-0003-0765-9636"},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Marco Antonio Casanova","raw_affiliation_strings":["Department of Informatics, Pontifical Catholic University of Rio de Janeiro, Brazil, Rua Marqu\u00eas de S. Vicente, 225, Rio de Janeiro, RJ, Brazil, CEP 22453-900"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Pontifical Catholic University of Rio de Janeiro, Brazil, Rua Marqu\u00eas de S. Vicente, 225, Rio de Janeiro, RJ, Brazil, CEP 22453-900","institution_ids":["https://openalex.org/I2699952"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058818363","display_name":"Luiz Fernando Bessa Seibel","orcid":null},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Luiz Fernando Bessa Seibel","raw_affiliation_strings":["Department of Informatics, Pontifical Catholic University of Rio de Janeiro, Brazil, Rua Marqu\u00eas de S. Vicente, 225, Rio de Janeiro, RJ, Brazil, CEP 22453-900"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Pontifical Catholic University of Rio de Janeiro, Brazil, Rua Marqu\u00eas de S. Vicente, 225, Rio de Janeiro, RJ, Brazil, CEP 22453-900","institution_ids":["https://openalex.org/I2699952"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065118727","display_name":"Jos\u00e9 Ant\u00f4nio Fernandes de Mac\u00eado","orcid":"https://orcid.org/0000-0002-0661-2978"},"institutions":[{"id":"https://openalex.org/I2699952","display_name":"Pontifical Catholic University of Rio de Janeiro","ror":"https://ror.org/01dg47b60","country_code":"BR","type":"education","lineage":["https://openalex.org/I2699952"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Jos\u00e9 Antonio Fernandes de Macedo","raw_affiliation_strings":["Department of Informatics, Pontifical Catholic University of Rio de Janeiro, Brazil, Rua Marqu\u00eas de S. Vicente, 225, Rio de Janeiro, RJ, Brazil, CEP 22453-900"],"affiliations":[{"raw_affiliation_string":"Department of Informatics, Pontifical Catholic University of Rio de Janeiro, Brazil, Rua Marqu\u00eas de S. Vicente, 225, Rio de Janeiro, RJ, Brazil, CEP 22453-900","institution_ids":["https://openalex.org/I2699952"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103073124","display_name":"Ant\u00f4nio Bas\u00edlio de Miranda","orcid":"https://orcid.org/0000-0002-4977-7350"},"institutions":[{"id":"https://openalex.org/I4210103790","display_name":"Faculdades Oswaldo Cruz","ror":"https://ror.org/02698kt06","country_code":"BR","type":"education","lineage":["https://openalex.org/I4210103790"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Antonio Bas\u00edlio de Miranda","raw_affiliation_strings":["Oswaldo Cruz Institute, Brazil"],"affiliations":[{"raw_affiliation_string":"Oswaldo Cruz Institute, Brazil","institution_ids":["https://openalex.org/I4210103790"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5104274791"],"corresponding_institution_ids":["https://openalex.org/I2699952"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.8889,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.79086892,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"781","last_page":"790"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9878000020980835,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9757000207901001,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.9359136819839478},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.8522576093673706},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8255947828292847},{"id":"https://openalex.org/keywords/workflow-management-system","display_name":"Workflow management system","score":0.7250252366065979},{"id":"https://openalex.org/keywords/workflow-technology","display_name":"Workflow technology","score":0.5083102583885193},{"id":"https://openalex.org/keywords/process-ontology","display_name":"Process ontology","score":0.49653226137161255},{"id":"https://openalex.org/keywords/ontology-based-data-integration","display_name":"Ontology-based data integration","score":0.47554799914360046},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.47046005725860596},{"id":"https://openalex.org/keywords/workflow-engine","display_name":"Workflow engine","score":0.4252226948738098},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.34675729274749756},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.2759738564491272},{"id":"https://openalex.org/keywords/domain-knowledge","display_name":"Domain knowledge","score":0.07346013188362122}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.9359136819839478},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.8522576093673706},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8255947828292847},{"id":"https://openalex.org/C140824633","wikidata":"https://www.wikidata.org/wiki/Q2808660","display_name":"Workflow management system","level":3,"score":0.7250252366065979},{"id":"https://openalex.org/C19612761","wikidata":"https://www.wikidata.org/wiki/Q8034836","display_name":"Workflow technology","level":3,"score":0.5083102583885193},{"id":"https://openalex.org/C137003198","wikidata":"https://www.wikidata.org/wiki/Q7247296","display_name":"Process ontology","level":3,"score":0.49653226137161255},{"id":"https://openalex.org/C22550185","wikidata":"https://www.wikidata.org/wiki/Q7095047","display_name":"Ontology-based data integration","level":3,"score":0.47554799914360046},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.47046005725860596},{"id":"https://openalex.org/C188220564","wikidata":"https://www.wikidata.org/wiki/Q3325097","display_name":"Workflow engine","level":3,"score":0.4252226948738098},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.34675729274749756},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.2759738564491272},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.07346013188362122},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-540-30075-5_75","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-540-30075-5_75","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W1512500307","https://openalex.org/W1991307293","https://openalex.org/W2015292449","https://openalex.org/W2055043387","https://openalex.org/W2107523227","https://openalex.org/W2110041134","https://openalex.org/W2121016876","https://openalex.org/W2132274614","https://openalex.org/W2139682514","https://openalex.org/W2148853951","https://openalex.org/W2166265186","https://openalex.org/W4255619361"],"related_works":["https://openalex.org/W2379425324","https://openalex.org/W2373541195","https://openalex.org/W2376410910","https://openalex.org/W2091596831","https://openalex.org/W2365658322","https://openalex.org/W2352344200","https://openalex.org/W329008868","https://openalex.org/W2367975678","https://openalex.org/W2375552622","https://openalex.org/W2906819665"],"abstract_inverted_index":null,"counts_by_year":[{"year":2012,"cited_by_count":10}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
