{"id":"https://openalex.org/W2890159565","doi":"https://doi.org/10.1007/978-3-319-99626-4_6","title":"Scalable Inference of Gene Regulatory Networks with the Spark Distributed Computing Platform","display_name":"Scalable Inference of Gene Regulatory Networks with the Spark Distributed Computing Platform","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2890159565","doi":"https://doi.org/10.1007/978-3-319-99626-4_6","mag":"2890159565"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-99626-4_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-99626-4_6","pdf_url":null,"source":{"id":"https://openalex.org/S2764461748","display_name":"Studies in computational intelligence","issn_l":"1860-949X","issn":["1860-949X","1860-9503"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Computational Intelligence","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024328499","display_name":"Crist\u00f3bal Barba-Gonz\u00e1lez","orcid":"https://orcid.org/0000-0002-8764-5076"},"institutions":[{"id":"https://openalex.org/I4210164724","display_name":"Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga","ror":"https://ror.org/05n3asa33","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210164724"]},{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Crist\u00f3bal Barba-Gonz\u00e1lez","raw_affiliation_strings":["Dept. de Lenguajes y Ciencias de la Computaci\u00f3n, Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga (IBIMA), University of M\u00e1laga, Campus de Teatinos, 29071, M\u00e1laga, Spain"],"affiliations":[{"raw_affiliation_string":"Dept. de Lenguajes y Ciencias de la Computaci\u00f3n, Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga (IBIMA), University of M\u00e1laga, Campus de Teatinos, 29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I4210164724","https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033733673","display_name":"Jos\u00e9 Garc\u00eda-Nieto","orcid":"https://orcid.org/0000-0003-2985-3480"},"institutions":[{"id":"https://openalex.org/I4210164724","display_name":"Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga","ror":"https://ror.org/05n3asa33","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210164724"]},{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jos\u00e9 Garc\u00eda-Nieto","raw_affiliation_strings":["Dept. de Lenguajes y Ciencias de la Computaci\u00f3n, Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga (IBIMA), University of M\u00e1laga, Campus de Teatinos, 29071, M\u00e1laga, Spain"],"affiliations":[{"raw_affiliation_string":"Dept. de Lenguajes y Ciencias de la Computaci\u00f3n, Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga (IBIMA), University of M\u00e1laga, Campus de Teatinos, 29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I4210164724","https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014994353","display_name":"Antonio Ben\u00edtez\u2010Hidalgo","orcid":"https://orcid.org/0000-0002-4396-8359"},"institutions":[{"id":"https://openalex.org/I4210164724","display_name":"Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga","ror":"https://ror.org/05n3asa33","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210164724"]},{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Antonio Ben\u00edtez-Hidalgo","raw_affiliation_strings":["Dept. de Lenguajes y Ciencias de la Computaci\u00f3n, Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga (IBIMA), University of M\u00e1laga, Campus de Teatinos, 29071, M\u00e1laga, Spain"],"affiliations":[{"raw_affiliation_string":"Dept. de Lenguajes y Ciencias de la Computaci\u00f3n, Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga (IBIMA), University of M\u00e1laga, Campus de Teatinos, 29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I4210164724","https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084006900","display_name":"Antonio J. Nebro","orcid":"https://orcid.org/0000-0001-5580-0484"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]},{"id":"https://openalex.org/I4210164724","display_name":"Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga","ror":"https://ror.org/05n3asa33","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210164724"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Antonio J. Nebro","raw_affiliation_strings":["Dept. de Lenguajes y Ciencias de la Computaci\u00f3n, Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga (IBIMA), University of M\u00e1laga, Campus de Teatinos, 29071, M\u00e1laga, Spain"],"affiliations":[{"raw_affiliation_string":"Dept. de Lenguajes y Ciencias de la Computaci\u00f3n, Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga (IBIMA), University of M\u00e1laga, Campus de Teatinos, 29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I4210164724","https://openalex.org/I82767444"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009495520","display_name":"Jos\u00e9 F. Aldana\u2010Montes","orcid":"https://orcid.org/0000-0002-2673-9474"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]},{"id":"https://openalex.org/I4210164724","display_name":"Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga","ror":"https://ror.org/05n3asa33","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210164724"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jos\u00e9 F. Aldana-Montes","raw_affiliation_strings":["Dept. de Lenguajes y Ciencias de la Computaci\u00f3n, Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga (IBIMA), University of M\u00e1laga, Campus de Teatinos, 29071, M\u00e1laga, Spain"],"affiliations":[{"raw_affiliation_string":"Dept. de Lenguajes y Ciencias de la Computaci\u00f3n, Instituto de Investigaci\u00f3n Biom\u00e9dica de M\u00e1laga (IBIMA), University of M\u00e1laga, Campus de Teatinos, 29071, M\u00e1laga, Spain","institution_ids":["https://openalex.org/I4210164724","https://openalex.org/I82767444"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5024328499"],"corresponding_institution_ids":["https://openalex.org/I4210164724","https://openalex.org/I82767444"],"apc_list":null,"apc_paid":null,"fwci":0.7963,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.72681014,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":null,"issue":null,"first_page":"61","last_page":"70"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9905999898910522,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.7440816164016724},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7203142642974854},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.709961473941803},{"id":"https://openalex.org/keywords/spark","display_name":"SPARK (programming language)","score":0.6733441948890686},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.6651926636695862},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3706924617290497},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.36622244119644165},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.32831281423568726},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32117196917533875},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10696375370025635},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10063126683235168}],"concepts":[{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.7440816164016724},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7203142642974854},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.709961473941803},{"id":"https://openalex.org/C2781215313","wikidata":"https://www.wikidata.org/wiki/Q3493345","display_name":"SPARK (programming language)","level":2,"score":0.6733441948890686},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.6651926636695862},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3706924617290497},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.36622244119644165},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.32831281423568726},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32117196917533875},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10696375370025635},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10063126683235168},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-99626-4_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-99626-4_6","pdf_url":null,"source":{"id":"https://openalex.org/S2764461748","display_name":"Studies in computational intelligence","issn_l":"1860-949X","issn":["1860-949X","1860-9503"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Computational Intelligence","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.550000011920929,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W1482637285","https://openalex.org/W1482645587","https://openalex.org/W1510585142","https://openalex.org/W1595498733","https://openalex.org/W1966250206","https://openalex.org/W1967547048","https://openalex.org/W2000825106","https://openalex.org/W2026188254","https://openalex.org/W2070978538","https://openalex.org/W2111932463","https://openalex.org/W2143076232","https://openalex.org/W2166511841","https://openalex.org/W2189465200","https://openalex.org/W2588238912","https://openalex.org/W2611370172"],"related_works":["https://openalex.org/W2364921833","https://openalex.org/W2385146268","https://openalex.org/W1596201972","https://openalex.org/W1967954938","https://openalex.org/W1788737569","https://openalex.org/W1986253068","https://openalex.org/W1767718647","https://openalex.org/W2380023786","https://openalex.org/W1588015694","https://openalex.org/W2546696010"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
