{"id":"https://openalex.org/W2794661795","doi":"https://doi.org/10.1007/978-3-319-78658-2_14","title":"Estimating Effects of Extrinsic Noise on Model Genes and Circuits with Empirically Validated Kinetics","display_name":"Estimating Effects of Extrinsic Noise on Model Genes and Circuits with Empirically Validated Kinetics","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2794661795","doi":"https://doi.org/10.1007/978-3-319-78658-2_14","mag":"2794661795"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-78658-2_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-78658-2_14","pdf_url":null,"source":{"id":"https://openalex.org/S2764900261","display_name":"Communications in computer and information science","issn_l":"1865-0929","issn":["1865-0929","1865-0937"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Communications in Computer and Information Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038008485","display_name":"Samuel M. D. Oliveira","orcid":"https://orcid.org/0000-0002-6914-5529"},"institutions":[{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Samuel M. D. Oliveira","raw_affiliation_strings":["Laboratory of Biosystem Dynamics, BioMediTech Institute, Tampere University of Technology, P.O Box 553, 33101, Tampere, Finland","Multi-scaled Biodata Analysis and Modelling Research Community, Tampere University of Technology, 33101, Tampere, Finland"],"raw_orcid":"https://orcid.org/0000-0002-6914-5529","affiliations":[{"raw_affiliation_string":"Laboratory of Biosystem Dynamics, BioMediTech Institute, Tampere University of Technology, P.O Box 553, 33101, Tampere, Finland","institution_ids":["https://openalex.org/I4210133110"]},{"raw_affiliation_string":"Multi-scaled Biodata Analysis and Modelling Research Community, Tampere University of Technology, 33101, Tampere, Finland","institution_ids":["https://openalex.org/I4210133110"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030826513","display_name":"Mohamed N. M. Bahrudeen","orcid":"https://orcid.org/0000-0003-3717-0583"},"institutions":[{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Mohamed N. M. Bahrudeen","raw_affiliation_strings":["Laboratory of Biosystem Dynamics, BioMediTech Institute, Tampere University of Technology, P.O Box 553, 33101, Tampere, Finland","Multi-scaled Biodata Analysis and Modelling Research Community, Tampere University of Technology, 33101, Tampere, Finland"],"raw_orcid":"https://orcid.org/0000-0003-3717-0583","affiliations":[{"raw_affiliation_string":"Laboratory of Biosystem Dynamics, BioMediTech Institute, Tampere University of Technology, P.O Box 553, 33101, Tampere, Finland","institution_ids":["https://openalex.org/I4210133110"]},{"raw_affiliation_string":"Multi-scaled Biodata Analysis and Modelling Research Community, Tampere University of Technology, 33101, Tampere, Finland","institution_ids":["https://openalex.org/I4210133110"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050205062","display_name":"Sofia Startceva","orcid":"https://orcid.org/0000-0002-2531-5530"},"institutions":[{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Sofia Startceva","raw_affiliation_strings":["Laboratory of Biosystem Dynamics, BioMediTech Institute, Tampere University of Technology, P.O Box 553, 33101, Tampere, Finland","Multi-scaled Biodata Analysis and Modelling Research Community, Tampere University of Technology, 33101, Tampere, Finland"],"raw_orcid":"https://orcid.org/0000-0002-2531-5530","affiliations":[{"raw_affiliation_string":"Laboratory of Biosystem Dynamics, BioMediTech Institute, Tampere University of Technology, P.O Box 553, 33101, Tampere, Finland","institution_ids":["https://openalex.org/I4210133110"]},{"raw_affiliation_string":"Multi-scaled Biodata Analysis and Modelling Research Community, Tampere University of Technology, 33101, Tampere, Finland","institution_ids":["https://openalex.org/I4210133110"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040628945","display_name":"Andr\u00e9 S. Ribeiro","orcid":"https://orcid.org/0000-0002-7255-5211"},"institutions":[{"id":"https://openalex.org/I4210133110","display_name":"Tampere University","ror":null,"country_code":"FI","type":null,"lineage":["https://openalex.org/I4210133110"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Andre S. Ribeiro","raw_affiliation_strings":["Laboratory of Biosystem Dynamics, BioMediTech Institute, Tampere University of Technology, P.O Box 553, 33101, Tampere, Finland","Multi-scaled Biodata Analysis and Modelling Research Community, Tampere University of Technology, 33101, Tampere, Finland"],"raw_orcid":"https://orcid.org/0000-0002-7255-5211","affiliations":[{"raw_affiliation_string":"Laboratory of Biosystem Dynamics, BioMediTech Institute, Tampere University of Technology, P.O Box 553, 33101, Tampere, Finland","institution_ids":["https://openalex.org/I4210133110"]},{"raw_affiliation_string":"Multi-scaled Biodata Analysis and Modelling Research Community, Tampere University of Technology, 33101, Tampere, Finland","institution_ids":["https://openalex.org/I4210133110"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5038008485"],"corresponding_institution_ids":["https://openalex.org/I4210133110"],"apc_list":null,"apc_paid":null,"fwci":0.7962,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.69829887,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"181","last_page":"193"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transcription","display_name":"Transcription (linguistics)","score":0.6362476348876953},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5890694260597229},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5885140895843506},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.5142633318901062},{"id":"https://openalex.org/keywords/rna-polymerase","display_name":"RNA polymerase","score":0.4987185001373291},{"id":"https://openalex.org/keywords/messenger-rna","display_name":"Messenger RNA","score":0.4459097981452942},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.44501861929893494},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4372667968273163},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.41346442699432373},{"id":"https://openalex.org/keywords/rna-polymerase-ii","display_name":"RNA polymerase II","score":0.4132801294326782},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.41155770421028137},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.39949655532836914},{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.28053784370422363}],"concepts":[{"id":"https://openalex.org/C179926584","wikidata":"https://www.wikidata.org/wiki/Q207714","display_name":"Transcription (linguistics)","level":2,"score":0.6362476348876953},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5890694260597229},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5885140895843506},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.5142633318901062},{"id":"https://openalex.org/C2776449523","wikidata":"https://www.wikidata.org/wiki/Q272631","display_name":"RNA polymerase","level":4,"score":0.4987185001373291},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.4459097981452942},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.44501861929893494},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4372667968273163},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.41346442699432373},{"id":"https://openalex.org/C64350747","wikidata":"https://www.wikidata.org/wiki/Q15334993","display_name":"RNA polymerase II","level":5,"score":0.4132801294326782},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.41155770421028137},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.39949655532836914},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.28053784370422363},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-78658-2_14","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-78658-2_14","pdf_url":null,"source":{"id":"https://openalex.org/S2764900261","display_name":"Communications in computer and information science","issn_l":"1865-0929","issn":["1865-0929","1865-0937"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Communications in Computer and Information Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":37,"referenced_works":["https://openalex.org/W208046272","https://openalex.org/W390146837","https://openalex.org/W1509938542","https://openalex.org/W1827772617","https://openalex.org/W1946177469","https://openalex.org/W1965973321","https://openalex.org/W1980879384","https://openalex.org/W1988834965","https://openalex.org/W2011097028","https://openalex.org/W2013620058","https://openalex.org/W2017162913","https://openalex.org/W2041030563","https://openalex.org/W2044890688","https://openalex.org/W2052094781","https://openalex.org/W2053460598","https://openalex.org/W2057107775","https://openalex.org/W2066010536","https://openalex.org/W2067660191","https://openalex.org/W2077720193","https://openalex.org/W2077770566","https://openalex.org/W2093535437","https://openalex.org/W2102233502","https://openalex.org/W2110310164","https://openalex.org/W2117956780","https://openalex.org/W2131195283","https://openalex.org/W2134440848","https://openalex.org/W2135054636","https://openalex.org/W2140158396","https://openalex.org/W2155418451","https://openalex.org/W2164011200","https://openalex.org/W2168989431","https://openalex.org/W2171280873","https://openalex.org/W2323834851","https://openalex.org/W2496201008","https://openalex.org/W2725394391","https://openalex.org/W2756368651","https://openalex.org/W4233808990"],"related_works":["https://openalex.org/W2074500923","https://openalex.org/W2137088684","https://openalex.org/W3022849104","https://openalex.org/W2081434722","https://openalex.org/W2003499939","https://openalex.org/W3106077619","https://openalex.org/W565175910","https://openalex.org/W2125490530","https://openalex.org/W2116252322","https://openalex.org/W2951130054","https://openalex.org/W1573777850","https://openalex.org/W2574343352","https://openalex.org/W2163706779","https://openalex.org/W2066039848","https://openalex.org/W2262285937","https://openalex.org/W2138458807","https://openalex.org/W3005737795","https://openalex.org/W2319953374","https://openalex.org/W2570629027","https://openalex.org/W2090826719"],"abstract_inverted_index":null,"counts_by_year":[{"year":2018,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
