{"id":"https://openalex.org/W2738670661","doi":"https://doi.org/10.1007/978-3-319-63121-9_5","title":"Improving the Timed Automata Approach to Biological Pathway Dynamics","display_name":"Improving the Timed Automata Approach to Biological Pathway Dynamics","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2738670661","doi":"https://doi.org/10.1007/978-3-319-63121-9_5","mag":"2738670661"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-63121-9_5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-63121-9_5","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://ris.utwente.nl/ws/files/15092749/KimFest_finalversion.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5014945719","display_name":"Rom Langerak","orcid":"https://orcid.org/0000-0002-1955-5183"},"institutions":[{"id":"https://openalex.org/I94624287","display_name":"University of Twente","ror":"https://ror.org/006hf6230","country_code":"NL","type":"education","lineage":["https://openalex.org/I94624287"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Rom Langerak","raw_affiliation_strings":["University of Twente, Enschede, The Netherlands"],"affiliations":[{"raw_affiliation_string":"University of Twente, Enschede, The Netherlands","institution_ids":["https://openalex.org/I94624287"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012697499","display_name":"Jaco van de Pol","orcid":"https://orcid.org/0000-0003-4305-0625"},"institutions":[{"id":"https://openalex.org/I94624287","display_name":"University of Twente","ror":"https://ror.org/006hf6230","country_code":"NL","type":"education","lineage":["https://openalex.org/I94624287"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Jaco van de Pol","raw_affiliation_strings":["University of Twente, Enschede, The Netherlands"],"affiliations":[{"raw_affiliation_string":"University of Twente, Enschede, The Netherlands","institution_ids":["https://openalex.org/I94624287"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061489108","display_name":"Janine N. Post","orcid":"https://orcid.org/0000-0002-6645-6583"},"institutions":[{"id":"https://openalex.org/I94624287","display_name":"University of Twente","ror":"https://ror.org/006hf6230","country_code":"NL","type":"education","lineage":["https://openalex.org/I94624287"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Janine N. Post","raw_affiliation_strings":["University of Twente, Enschede, The Netherlands"],"affiliations":[{"raw_affiliation_string":"University of Twente, Enschede, The Netherlands","institution_ids":["https://openalex.org/I94624287"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010396704","display_name":"Stefano Schivo","orcid":"https://orcid.org/0000-0002-4945-1473"},"institutions":[{"id":"https://openalex.org/I94624287","display_name":"University of Twente","ror":"https://ror.org/006hf6230","country_code":"NL","type":"education","lineage":["https://openalex.org/I94624287"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Stefano Schivo","raw_affiliation_strings":["University of Twente, Enschede, The Netherlands"],"affiliations":[{"raw_affiliation_string":"University of Twente, Enschede, The Netherlands","institution_ids":["https://openalex.org/I94624287"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5014945719"],"corresponding_institution_ids":["https://openalex.org/I94624287"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.4525,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.63344661,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"96","last_page":"111"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10142","display_name":"Formal Methods in Verification","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8820009231567383},{"id":"https://openalex.org/keywords/automaton","display_name":"Automaton","score":0.7534388303756714},{"id":"https://openalex.org/keywords/formalism","display_name":"Formalism (music)","score":0.6515874266624451},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.5464022755622864},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.48933547735214233},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.47090792655944824},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.4239486753940582},{"id":"https://openalex.org/keywords/model-checking","display_name":"Model checking","score":0.42242249846458435},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.41428548097610474},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.32604697346687317},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.28632766008377075}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8820009231567383},{"id":"https://openalex.org/C112505250","wikidata":"https://www.wikidata.org/wiki/Q787116","display_name":"Automaton","level":2,"score":0.7534388303756714},{"id":"https://openalex.org/C73301696","wikidata":"https://www.wikidata.org/wiki/Q5469984","display_name":"Formalism (music)","level":3,"score":0.6515874266624451},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.5464022755622864},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.48933547735214233},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.47090792655944824},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.4239486753940582},{"id":"https://openalex.org/C110251889","wikidata":"https://www.wikidata.org/wiki/Q1569697","display_name":"Model checking","level":2,"score":0.42242249846458435},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.41428548097610474},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.32604697346687317},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.28632766008377075},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0},{"id":"https://openalex.org/C558565934","wikidata":"https://www.wikidata.org/wiki/Q2743","display_name":"Musical","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/978-3-319-63121-9_5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-63121-9_5","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:ris.utwente.nl:openaire/f4d0afa3-7e60-4acf-a013-5dd454f6ea76","is_oa":true,"landing_page_url":"https://research.utwente.nl/en/publications/f4d0afa3-7e60-4acf-a013-5dd454f6ea76","pdf_url":"https://ris.utwente.nl/ws/files/15092749/KimFest_finalversion.pdf","source":{"id":"https://openalex.org/S4406922991","display_name":"University of Twente Research Information","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Langerak, R, van de Pol, J, Post, J N & Schivo, S 2017, Improving the Timed Automata Approach to Biological Pathway Dynamics. in L Aceto, G Bacci, G Bacci, A Ing\u00f3lfsd\u00f3ttir, A Legay & R Mardare (eds), Models, Algorithms, Logics and Tools : Essays Dedicated to Kim Guldstrand Larsen on the Occasion of His 60th Birthday. Lecture Notes in Computer Science, vol. 10460, Springer, pp. 96-111, KimFest, Aalborg, Denmark, 19/08/17. https://doi.org/10.1007/978-3-319-63121-9_5","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:ou:oai:research.ou.nl:publications/4deec1a6-7dfd-47ee-8614-68ed4dbcf945","is_oa":false,"landing_page_url":"https://research.ou.nl/en/publications/4deec1a6-7dfd-47ee-8614-68ed4dbcf945","pdf_url":null,"source":{"id":"https://openalex.org/S4306401843","display_name":"Data Archiving and Networked Services (DANS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1322597698","host_organization_name":"Royal Netherlands Academy of Arts and Sciences","host_organization_lineage":["https://openalex.org/I1322597698"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Models, Algorithms, Logics and Tools, 96 - 111","raw_type":"info:eu-repo/semantics/bookpart"}],"best_oa_location":{"id":"pmh:oai:ris.utwente.nl:openaire/f4d0afa3-7e60-4acf-a013-5dd454f6ea76","is_oa":true,"landing_page_url":"https://research.utwente.nl/en/publications/f4d0afa3-7e60-4acf-a013-5dd454f6ea76","pdf_url":"https://ris.utwente.nl/ws/files/15092749/KimFest_finalversion.pdf","source":{"id":"https://openalex.org/S4406922991","display_name":"University of Twente Research Information","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Langerak, R, van de Pol, J, Post, J N & Schivo, S 2017, Improving the Timed Automata Approach to Biological Pathway Dynamics. in L Aceto, G Bacci, G Bacci, A Ing\u00f3lfsd\u00f3ttir, A Legay & R Mardare (eds), Models, Algorithms, Logics and Tools : Essays Dedicated to Kim Guldstrand Larsen on the Occasion of His 60th Birthday. Lecture Notes in Computer Science, vol. 10460, Springer, pp. 96-111, KimFest, Aalborg, Denmark, 19/08/17. https://doi.org/10.1007/978-3-319-63121-9_5","raw_type":"info:eu-repo/semantics/publishedVersion"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2738670661.pdf","grobid_xml":"https://content.openalex.org/works/W2738670661.grobid-xml"},"referenced_works_count":26,"referenced_works":["https://openalex.org/W27065254","https://openalex.org/W87687620","https://openalex.org/W96334552","https://openalex.org/W1583443197","https://openalex.org/W1635966657","https://openalex.org/W1977886436","https://openalex.org/W1983350265","https://openalex.org/W1987535580","https://openalex.org/W1995428640","https://openalex.org/W2000947342","https://openalex.org/W2034188706","https://openalex.org/W2040026307","https://openalex.org/W2101508170","https://openalex.org/W2117949454","https://openalex.org/W2129388048","https://openalex.org/W2131067724","https://openalex.org/W2144584127","https://openalex.org/W2150271494","https://openalex.org/W2159482845","https://openalex.org/W2169830285","https://openalex.org/W2271042972","https://openalex.org/W2462508074","https://openalex.org/W2475629947","https://openalex.org/W2488611155","https://openalex.org/W3098740446","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W1538854713","https://openalex.org/W2046435967","https://openalex.org/W4231775656","https://openalex.org/W2746280673","https://openalex.org/W1594593035","https://openalex.org/W2152996796","https://openalex.org/W2560415449","https://openalex.org/W4289687320","https://openalex.org/W925418074","https://openalex.org/W2119610731"],"abstract_inverted_index":null,"counts_by_year":[{"year":2019,"cited_by_count":1}],"updated_date":"2026-03-17T17:19:04.345684","created_date":"2025-10-10T00:00:00"}
