{"id":"https://openalex.org/W2269076036","doi":"https://doi.org/10.1007/978-3-319-58163-7_10","title":"CSA-X: Modularized Constrained Multiple Sequence Alignment","display_name":"CSA-X: Modularized Constrained Multiple Sequence Alignment","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2269076036","doi":"https://doi.org/10.1007/978-3-319-58163-7_10","mag":"2269076036"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-58163-7_10","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-58163-7_10","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083230236","display_name":"Tonima Islam","orcid":null},"institutions":[{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"T. M. Rezwanul Islam","raw_affiliation_strings":["Department of Computer Science, University of Saskatchewan, Saskatoon, SK, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Saskatchewan, Saskatoon, SK, Canada","institution_ids":["https://openalex.org/I32625721"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040385755","display_name":"Ian McQuillan","orcid":"https://orcid.org/0000-0002-7998-4430"},"institutions":[{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Ian McQuillan","raw_affiliation_strings":["Department of Computer Science, University of Saskatchewan, Saskatoon, SK, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Saskatchewan, Saskatoon, SK, Canada","institution_ids":["https://openalex.org/I32625721"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.9056,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.71528818,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"143","last_page":"154"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.6945555806159973},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.6659621596336365},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6568266153335571},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.6362590789794922},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.596687912940979},{"id":"https://openalex.org/keywords/wilcoxon-signed-rank-test","display_name":"Wilcoxon signed-rank test","score":0.5894599556922913},{"id":"https://openalex.org/keywords/rank","display_name":"Rank (graph theory)","score":0.545203685760498},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.5375117659568787},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4469189941883087},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3855755031108856},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.20335984230041504},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.18846556544303894},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.12137001752853394},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.11044949293136597},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08743011951446533},{"id":"https://openalex.org/keywords/mann\u2013whitney-u-test","display_name":"Mann\u2013Whitney U test","score":0.0785607397556305},{"id":"https://openalex.org/keywords/cartography","display_name":"Cartography","score":0.07787182927131653}],"concepts":[{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.6945555806159973},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.6659621596336365},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6568266153335571},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.6362590789794922},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.596687912940979},{"id":"https://openalex.org/C206041023","wikidata":"https://www.wikidata.org/wiki/Q1751970","display_name":"Wilcoxon signed-rank test","level":3,"score":0.5894599556922913},{"id":"https://openalex.org/C164226766","wikidata":"https://www.wikidata.org/wiki/Q7293202","display_name":"Rank (graph theory)","level":2,"score":0.545203685760498},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.5375117659568787},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4469189941883087},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3855755031108856},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.20335984230041504},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.18846556544303894},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.12137001752853394},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.11044949293136597},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08743011951446533},{"id":"https://openalex.org/C12868164","wikidata":"https://www.wikidata.org/wiki/Q1424533","display_name":"Mann\u2013Whitney U test","level":2,"score":0.0785607397556305},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.07787182927131653},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-319-58163-7_10","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-58163-7_10","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:ecommons.usask.ca:10388/ETD-2015-10-2276","is_oa":false,"landing_page_url":"http://hdl.handle.net/10388/ETD-2015-10-2276","pdf_url":null,"source":{"id":"https://openalex.org/S4377196608","display_name":"University Library - University of Saskatchewan (University of Saskatchewan)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I32625721","host_organization_name":"University of Saskatchewan","host_organization_lineage":["https://openalex.org/I32625721"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":44,"referenced_works":["https://openalex.org/W101826297","https://openalex.org/W1543636183","https://openalex.org/W1552506623","https://openalex.org/W1590240800","https://openalex.org/W1619500442","https://openalex.org/W1694876563","https://openalex.org/W1918431092","https://openalex.org/W1969153299","https://openalex.org/W1974326986","https://openalex.org/W1974758710","https://openalex.org/W1982481323","https://openalex.org/W2003399735","https://openalex.org/W2042428691","https://openalex.org/W2044025344","https://openalex.org/W2048333869","https://openalex.org/W2055043387","https://openalex.org/W2058336694","https://openalex.org/W2074231493","https://openalex.org/W2077235131","https://openalex.org/W2083319603","https://openalex.org/W2091380713","https://openalex.org/W2093182230","https://openalex.org/W2098129242","https://openalex.org/W2103903744","https://openalex.org/W2106882534","https://openalex.org/W2114520383","https://openalex.org/W2118716355","https://openalex.org/W2119732072","https://openalex.org/W2127774996","https://openalex.org/W2132926880","https://openalex.org/W2133783550","https://openalex.org/W2136570298","https://openalex.org/W2140872496","https://openalex.org/W2141411672","https://openalex.org/W2143210482","https://openalex.org/W2144362290","https://openalex.org/W2152326664","https://openalex.org/W2155479906","https://openalex.org/W2157674573","https://openalex.org/W2158714788","https://openalex.org/W2162800127","https://openalex.org/W2170666908","https://openalex.org/W2521356820","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2614680695","https://openalex.org/W2051969447","https://openalex.org/W2111937814","https://openalex.org/W2162923930","https://openalex.org/W1482324242","https://openalex.org/W2133116680","https://openalex.org/W2091678889","https://openalex.org/W2029514038","https://openalex.org/W2149492307","https://openalex.org/W1985408726"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}