{"id":"https://openalex.org/W2560209686","doi":"https://doi.org/10.1007/978-3-319-56970-3_16","title":"Improved Search of Large Transcriptomic Sequencing Databases Using Split Sequence Bloom Trees","display_name":"Improved Search of Large Transcriptomic Sequencing Databases Using Split Sequence Bloom Trees","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2560209686","doi":"https://doi.org/10.1007/978-3-319-56970-3_16","mag":"2560209686"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-56970-3_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-56970-3_16","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073865951","display_name":"Brad Solomon","orcid":"https://orcid.org/0000-0002-4293-1677"},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]},{"id":"https://openalex.org/I170201317","display_name":"University of Pittsburgh","ror":"https://ror.org/01an3r305","country_code":"US","type":"education","lineage":["https://openalex.org/I170201317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brad Solomon","raw_affiliation_strings":["Computational Biology Department, School of Computer Science, Joint Carnegie Mellon University\u2013University of Pittsburgh Ph.D. Program in Computational Biology, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA"],"affiliations":[{"raw_affiliation_string":"Computational Biology Department, School of Computer Science, Joint Carnegie Mellon University\u2013University of Pittsburgh Ph.D. Program in Computational Biology, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA","institution_ids":["https://openalex.org/I74973139","https://openalex.org/I170201317"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113653378","display_name":"Carl Kingsford","orcid":null},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Carl Kingsford","raw_affiliation_strings":["Computational Biology Department, School of Computer Science, Carnegie Mellon University, 5000 Forbes Ave., Pittsburgh, Pennsylvania, USA"],"affiliations":[{"raw_affiliation_string":"Computational Biology Department, School of Computer Science, Carnegie Mellon University, 5000 Forbes Ave., Pittsburgh, Pennsylvania, USA","institution_ids":["https://openalex.org/I74973139"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5113653378"],"corresponding_institution_ids":["https://openalex.org/I74973139"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":15.751,"has_fulltext":false,"cited_by_count":35,"citation_normalized_percentile":{"value":0.99384422,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"257","last_page":"271"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11478","display_name":"Caching and Content Delivery","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11478","display_name":"Caching and Content Delivery","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9882000088691711,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.98580002784729,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.797795832157135},{"id":"https://openalex.org/keywords/terabyte","display_name":"Terabyte","score":0.7738462090492249},{"id":"https://openalex.org/keywords/bloom-filter","display_name":"Bloom filter","score":0.6241767406463623},{"id":"https://openalex.org/keywords/search-engine-indexing","display_name":"Search engine indexing","score":0.6019884347915649},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4499703645706177},{"id":"https://openalex.org/keywords/sequence-database","display_name":"Sequence database","score":0.44221067428588867},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4257586598396301},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.36484408378601074},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.36034902930259705},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.1596001386642456},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15547773241996765},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08908429741859436},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08679908514022827}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.797795832157135},{"id":"https://openalex.org/C199683683","wikidata":"https://www.wikidata.org/wiki/Q8799","display_name":"Terabyte","level":2,"score":0.7738462090492249},{"id":"https://openalex.org/C147224247","wikidata":"https://www.wikidata.org/wiki/Q885373","display_name":"Bloom filter","level":2,"score":0.6241767406463623},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.6019884347915649},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4499703645706177},{"id":"https://openalex.org/C41584329","wikidata":"https://www.wikidata.org/wiki/Q175902","display_name":"Sequence database","level":3,"score":0.44221067428588867},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4257586598396301},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.36484408378601074},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.36034902930259705},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.1596001386642456},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15547773241996765},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08908429741859436},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08679908514022827},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-56970-3_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-56970-3_16","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W17958277","https://openalex.org/W1546738280","https://openalex.org/W1912338927","https://openalex.org/W1962019683","https://openalex.org/W1985174631","https://openalex.org/W1993284846","https://openalex.org/W1998048394","https://openalex.org/W2065128082","https://openalex.org/W2088386938","https://openalex.org/W2115546424","https://openalex.org/W2116041602","https://openalex.org/W2123845384","https://openalex.org/W2124913522","https://openalex.org/W2128162768","https://openalex.org/W2135494327","https://openalex.org/W2142678478","https://openalex.org/W2159647614","https://openalex.org/W2161361792","https://openalex.org/W2161488606","https://openalex.org/W2167669612","https://openalex.org/W2170899819","https://openalex.org/W2266239166","https://openalex.org/W2278452282","https://openalex.org/W2285253122","https://openalex.org/W4233928114"],"related_works":["https://openalex.org/W2963003682","https://openalex.org/W4249836580","https://openalex.org/W3140834074","https://openalex.org/W1963586751","https://openalex.org/W2024134474","https://openalex.org/W342688938","https://openalex.org/W2158915197","https://openalex.org/W2153015554","https://openalex.org/W2086064646","https://openalex.org/W2004247383"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":11},{"year":2017,"cited_by_count":6}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
