{"id":"https://openalex.org/W2599130894","doi":"https://doi.org/10.1007/978-3-319-55911-7_8","title":"On the Shortest Common Superstring of NGS Reads","display_name":"On the Shortest Common Superstring of NGS Reads","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2599130894","doi":"https://doi.org/10.1007/978-3-319-55911-7_8","mag":"2599130894"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-55911-7_8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-55911-7_8","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000173975","display_name":"Tristan Braquelaire","orcid":null},"institutions":[{"id":"https://openalex.org/I15057530","display_name":"Universit\u00e9 de Bordeaux","ror":"https://ror.org/057qpr032","country_code":"FR","type":"education","lineage":["https://openalex.org/I15057530"]},{"id":"https://openalex.org/I4210142254","display_name":"Laboratoire Bordelais de Recherche en Informatique","ror":"https://ror.org/03adqg323","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I15057530","https://openalex.org/I4210142254","https://openalex.org/I4210159245","https://openalex.org/I4210160189"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Tristan Braquelaire","raw_affiliation_strings":["LaBRI and CBiB, University of Bordeaux, Bordeaux, France"],"affiliations":[{"raw_affiliation_string":"LaBRI and CBiB, University of Bordeaux, Bordeaux, France","institution_ids":["https://openalex.org/I15057530","https://openalex.org/I4210142254"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086478005","display_name":"Marie Gasparoux","orcid":null},"institutions":[{"id":"https://openalex.org/I70931966","display_name":"Universit\u00e9 de Montr\u00e9al","ror":"https://ror.org/0161xgx34","country_code":"CA","type":"education","lineage":["https://openalex.org/I70931966"]},{"id":"https://openalex.org/I4210150747","display_name":"H\u00f4tel-Dieu de Montr\u00e9al","ror":"https://ror.org/0468gx405","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I4210142730","https://openalex.org/I4210150747"]},{"id":"https://openalex.org/I4210142254","display_name":"Laboratoire Bordelais de Recherche en Informatique","ror":"https://ror.org/03adqg323","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I15057530","https://openalex.org/I4210142254","https://openalex.org/I4210159245","https://openalex.org/I4210160189"]},{"id":"https://openalex.org/I15057530","display_name":"Universit\u00e9 de Bordeaux","ror":"https://ror.org/057qpr032","country_code":"FR","type":"education","lineage":["https://openalex.org/I15057530"]}],"countries":["CA","FR"],"is_corresponding":false,"raw_author_name":"Marie Gasparoux","raw_affiliation_strings":["DIRO, University of Montr\u00e9al, Montr\u00e9al, Qu\u00e9bec, Canada","LaBRI and CBiB, University of Bordeaux, Bordeaux, France"],"affiliations":[{"raw_affiliation_string":"DIRO, University of Montr\u00e9al, Montr\u00e9al, Qu\u00e9bec, Canada","institution_ids":["https://openalex.org/I70931966","https://openalex.org/I4210150747"]},{"raw_affiliation_string":"LaBRI and CBiB, University of Bordeaux, Bordeaux, France","institution_ids":["https://openalex.org/I15057530","https://openalex.org/I4210142254"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036712583","display_name":"Mathieu Raffinot","orcid":"https://orcid.org/0009-0006-4621-2705"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I15057530","display_name":"Universit\u00e9 de Bordeaux","ror":"https://ror.org/057qpr032","country_code":"FR","type":"education","lineage":["https://openalex.org/I15057530"]},{"id":"https://openalex.org/I4210142254","display_name":"Laboratoire Bordelais de Recherche en Informatique","ror":"https://ror.org/03adqg323","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I15057530","https://openalex.org/I4210142254","https://openalex.org/I4210159245","https://openalex.org/I4210160189"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Mathieu Raffinot","raw_affiliation_strings":["CNRS, LaBRI and CBiB, University of Bordeaux, Bordeaux, France","LaBRI and CBiB, University of Bordeaux, Bordeaux, France"],"affiliations":[{"raw_affiliation_string":"CNRS, LaBRI and CBiB, University of Bordeaux, Bordeaux, France","institution_ids":["https://openalex.org/I15057530","https://openalex.org/I1294671590","https://openalex.org/I4210142254"]},{"raw_affiliation_string":"LaBRI and CBiB, University of Bordeaux, Bordeaux, France","institution_ids":["https://openalex.org/I15057530","https://openalex.org/I4210142254"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008422748","display_name":"Raluca Uricaru","orcid":"https://orcid.org/0000-0002-5730-6428"},"institutions":[{"id":"https://openalex.org/I15057530","display_name":"Universit\u00e9 de Bordeaux","ror":"https://ror.org/057qpr032","country_code":"FR","type":"education","lineage":["https://openalex.org/I15057530"]},{"id":"https://openalex.org/I4210142254","display_name":"Laboratoire Bordelais de Recherche en Informatique","ror":"https://ror.org/03adqg323","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I15057530","https://openalex.org/I4210142254","https://openalex.org/I4210159245","https://openalex.org/I4210160189"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Raluca Uricaru","raw_affiliation_strings":["LaBRI and CBiB, University of Bordeaux, Bordeaux, France"],"affiliations":[{"raw_affiliation_string":"LaBRI and CBiB, University of Bordeaux, Bordeaux, France","institution_ids":["https://openalex.org/I15057530","https://openalex.org/I4210142254"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5000173975"],"corresponding_institution_ids":["https://openalex.org/I15057530","https://openalex.org/I4210142254"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.2826,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.52755398,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"97","last_page":"111"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13768","display_name":"Oral and gingival health research","score":0.9635000228881836,"subfield":{"id":"https://openalex.org/subfields/3611","display_name":"Pharmacy"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/substring","display_name":"Substring","score":0.9634435176849365},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.5947093963623047},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.5130764245986938},{"id":"https://openalex.org/keywords/superstring-theory","display_name":"Superstring theory","score":0.505615234375},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.49809789657592773},{"id":"https://openalex.org/keywords/approximation-algorithm","display_name":"Approximation algorithm","score":0.4782939553260803},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.47198396921157837},{"id":"https://openalex.org/keywords/string-searching-algorithm","display_name":"String searching algorithm","score":0.47073686122894287},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4560913145542145},{"id":"https://openalex.org/keywords/sampling","display_name":"Sampling (signal processing)","score":0.4105617105960846},{"id":"https://openalex.org/keywords/discrete-mathematics","display_name":"Discrete mathematics","score":0.33606165647506714},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.33415305614471436},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.31589508056640625}],"concepts":[{"id":"https://openalex.org/C182407805","wikidata":"https://www.wikidata.org/wiki/Q2626534","display_name":"Substring","level":3,"score":0.9634435176849365},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.5947093963623047},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.5130764245986938},{"id":"https://openalex.org/C20288","wikidata":"https://www.wikidata.org/wiki/Q1437042","display_name":"Superstring theory","level":3,"score":0.505615234375},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.49809789657592773},{"id":"https://openalex.org/C148764684","wikidata":"https://www.wikidata.org/wiki/Q621751","display_name":"Approximation algorithm","level":2,"score":0.4782939553260803},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.47198396921157837},{"id":"https://openalex.org/C7757238","wikidata":"https://www.wikidata.org/wiki/Q374040","display_name":"String searching algorithm","level":3,"score":0.47073686122894287},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4560913145542145},{"id":"https://openalex.org/C140779682","wikidata":"https://www.wikidata.org/wiki/Q210868","display_name":"Sampling (signal processing)","level":3,"score":0.4105617105960846},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.33606165647506714},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.33415305614471436},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.31589508056640625},{"id":"https://openalex.org/C106131492","wikidata":"https://www.wikidata.org/wiki/Q3072260","display_name":"Filter (signal processing)","level":2,"score":0.0},{"id":"https://openalex.org/C116674579","wikidata":"https://www.wikidata.org/wiki/Q193442","display_name":"Supersymmetry","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-319-55911-7_8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-55911-7_8","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:HAL:hal-02492119v1","is_oa":false,"landing_page_url":"https://hal.science/hal-02492119","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://link-springer-com.ins2i.bib.cnrs.fr/book/10.1007/978-3-319-55911-7","raw_type":"Conference papers"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W56066823","https://openalex.org/W194848955","https://openalex.org/W322125272","https://openalex.org/W1488861257","https://openalex.org/W1555609656","https://openalex.org/W1563399908","https://openalex.org/W1580469288","https://openalex.org/W1989048084","https://openalex.org/W2005315460","https://openalex.org/W2011039300","https://openalex.org/W2036145579","https://openalex.org/W2037050365","https://openalex.org/W2061753037","https://openalex.org/W2076047621","https://openalex.org/W2090223576","https://openalex.org/W2091254169","https://openalex.org/W2102403605","https://openalex.org/W2102706148","https://openalex.org/W2111953579","https://openalex.org/W2113212473","https://openalex.org/W2122132398","https://openalex.org/W2134761228","https://openalex.org/W2158420218","https://openalex.org/W2176235320","https://openalex.org/W2288264698","https://openalex.org/W2611804663","https://openalex.org/W2950973021","https://openalex.org/W3105422891","https://openalex.org/W4230573295","https://openalex.org/W6600545252"],"related_works":["https://openalex.org/W2141006903","https://openalex.org/W2036145579","https://openalex.org/W1585123441","https://openalex.org/W2902482624","https://openalex.org/W52396946","https://openalex.org/W2298204719","https://openalex.org/W2376315482","https://openalex.org/W1564013439","https://openalex.org/W3112977702","https://openalex.org/W3022344494"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}