{"id":"https://openalex.org/W2560754726","doi":"https://doi.org/10.1007/978-3-319-50478-0_13","title":"A Master Pipeline for Discovery and Validation of Biomarkers","display_name":"A Master Pipeline for Discovery and Validation of Biomarkers","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2560754726","doi":"https://doi.org/10.1007/978-3-319-50478-0_13","mag":"2560754726"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-50478-0_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-50478-0_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043288857","display_name":"Sebastian J. Teran Hidalgo","orcid":null},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sebastian J. Teran Hidalgo","raw_affiliation_strings":["Department of Biostatistics, Yale University, Hew Haven, CT, USA","Department of Biostatistics, Yale University, Hew Haven, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, Yale University, Hew Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Department of Biostatistics, Yale University, Hew Haven, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075588503","display_name":"Michael T. Lawson","orcid":null},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael T. Lawson","raw_affiliation_strings":["Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","Department of Biostatistics, University of North Carolina, Chapel Hill, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017895437","display_name":"Daniel J. Luckett","orcid":"https://orcid.org/0000-0002-6358-9081"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel J. Luckett","raw_affiliation_strings":["Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","Department of Biostatistics, University of North Carolina, Chapel Hill, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006079441","display_name":"Monica Chaudhari","orcid":"https://orcid.org/0000-0002-0854-1843"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Monica Chaudhari","raw_affiliation_strings":["Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","Department of Biostatistics, University of North Carolina, Chapel Hill, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014397444","display_name":"Jingxiang Chen","orcid":"https://orcid.org/0000-0003-2495-7918"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jingxiang Chen","raw_affiliation_strings":["Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","Department of Biostatistics, University of North Carolina, Chapel Hill, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014264632","display_name":"Arkopal Choudhury","orcid":null},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arkopal Choudhury","raw_affiliation_strings":["Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","Department of Biostatistics, University of North Carolina, Chapel Hill, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042172394","display_name":"Arianna Di Florio","orcid":"https://orcid.org/0000-0003-0338-2748"},"institutions":[{"id":"https://openalex.org/I79510175","display_name":"Cardiff University","ror":"https://ror.org/03kk7td41","country_code":"GB","type":"education","lineage":["https://openalex.org/I79510175"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Arianna Di Florio","raw_affiliation_strings":["Division of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, Wales, UK"],"affiliations":[{"raw_affiliation_string":"Division of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, Wales, UK","institution_ids":["https://openalex.org/I79510175"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057351159","display_name":"Xiaotong Jiang","orcid":"https://orcid.org/0000-0003-3698-4526"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaotong Jiang","raw_affiliation_strings":["Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","Department of Biostatistics, University of North Carolina, Chapel Hill, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027277991","display_name":"Crystal Nguyen","orcid":"https://orcid.org/0000-0002-8798-0739"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Crystal T. Nguyen","raw_affiliation_strings":["Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","Department of Biostatistics, University of North Carolina, Chapel Hill, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045963637","display_name":"Michael R. Kosorok","orcid":"https://orcid.org/0000-0002-6070-9738"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Michael R. Kosorok","raw_affiliation_strings":["Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","Department of Biostatistics, University of North Carolina, Chapel Hill, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"Department of Biostatistics, University of North Carolina, Chapel Hill, USA","institution_ids":["https://openalex.org/I114027177"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5045963637"],"corresponding_institution_ids":["https://openalex.org/I114027177"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.29049296,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"259","last_page":"288"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11235","display_name":"Statistical Methods in Clinical Trials","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11235","display_name":"Statistical Methods in Clinical Trials","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.979200005531311,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9717000126838684,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7717065811157227},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.729629635810852},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.601351261138916},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.533594012260437},{"id":"https://openalex.org/keywords/biomarker-discovery","display_name":"Biomarker discovery","score":0.5012402534484863},{"id":"https://openalex.org/keywords/statistical-inference","display_name":"Statistical inference","score":0.4713071286678314},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.4599780738353729},{"id":"https://openalex.org/keywords/perspective","display_name":"Perspective (graphical)","score":0.4372618794441223},{"id":"https://openalex.org/keywords/biomarker","display_name":"Biomarker","score":0.4348803162574768},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.42447537183761597},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.4231339693069458},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38873904943466187},{"id":"https://openalex.org/keywords/risk-analysis","display_name":"Risk analysis (engineering)","score":0.38396787643432617},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.1178426444530487},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.10641193389892578}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7717065811157227},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.729629635810852},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.601351261138916},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.533594012260437},{"id":"https://openalex.org/C124535831","wikidata":"https://www.wikidata.org/wiki/Q4915074","display_name":"Biomarker discovery","level":4,"score":0.5012402534484863},{"id":"https://openalex.org/C134261354","wikidata":"https://www.wikidata.org/wiki/Q938438","display_name":"Statistical inference","level":2,"score":0.4713071286678314},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.4599780738353729},{"id":"https://openalex.org/C12713177","wikidata":"https://www.wikidata.org/wiki/Q1900281","display_name":"Perspective (graphical)","level":2,"score":0.4372618794441223},{"id":"https://openalex.org/C2781197716","wikidata":"https://www.wikidata.org/wiki/Q864574","display_name":"Biomarker","level":2,"score":0.4348803162574768},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.42447537183761597},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.4231339693069458},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38873904943466187},{"id":"https://openalex.org/C112930515","wikidata":"https://www.wikidata.org/wiki/Q4389547","display_name":"Risk analysis (engineering)","level":1,"score":0.38396787643432617},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1178426444530487},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.10641193389892578},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-50478-0_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-319-50478-0_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":117,"referenced_works":["https://openalex.org/W129400823","https://openalex.org/W147186041","https://openalex.org/W576690711","https://openalex.org/W832460421","https://openalex.org/W1479807131","https://openalex.org/W1480376833","https://openalex.org/W1505191356","https://openalex.org/W1510659740","https://openalex.org/W1539462193","https://openalex.org/W1563088657","https://openalex.org/W1594293291","https://openalex.org/W1651586605","https://openalex.org/W1742035259","https://openalex.org/W1904365287","https://openalex.org/W1966267239","https://openalex.org/W1979212156","https://openalex.org/W1980092349","https://openalex.org/W1980541833","https://openalex.org/W1982770064","https://openalex.org/W1984238247","https://openalex.org/W1987424755","https://openalex.org/W1988985184","https://openalex.org/W1990538023","https://openalex.org/W1991522349","https://openalex.org/W1992806887","https://openalex.org/W1992918752","https://openalex.org/W1994857208","https://openalex.org/W2001141328","https://openalex.org/W2001667783","https://openalex.org/W2005310260","https://openalex.org/W2006554089","https://openalex.org/W2008998978","https://openalex.org/W2014418634","https://openalex.org/W2014578307","https://openalex.org/W2016765200","https://openalex.org/W2026622206","https://openalex.org/W2026925128","https://openalex.org/W2027795129","https://openalex.org/W2029445248","https://openalex.org/W2031598718","https://openalex.org/W2037559873","https://openalex.org/W2038146650","https://openalex.org/W2045521109","https://openalex.org/W2049655669","https://openalex.org/W2049732917","https://openalex.org/W2051243106","https://openalex.org/W2053186076","https://openalex.org/W2059527039","https://openalex.org/W2063463192","https://openalex.org/W2066153095","https://openalex.org/W2066648075","https://openalex.org/W2071659396","https://openalex.org/W2075651107","https://openalex.org/W2075982184","https://openalex.org/W2080675410","https://openalex.org/W2082299845","https://openalex.org/W2087347434","https://openalex.org/W2088338354","https://openalex.org/W2088705026","https://openalex.org/W2099620796","https://openalex.org/W2104806243","https://openalex.org/W2106398669","https://openalex.org/W2106421416","https://openalex.org/W2106660660","https://openalex.org/W2106980005","https://openalex.org/W2109465247","https://openalex.org/W2110065044","https://openalex.org/W2112316706","https://openalex.org/W2114850871","https://openalex.org/W2116435063","https://openalex.org/W2121044470","https://openalex.org/W2122641774","https://openalex.org/W2125071097","https://openalex.org/W2126292488","https://openalex.org/W2130126144","https://openalex.org/W2132222940","https://openalex.org/W2133053159","https://openalex.org/W2135046866","https://openalex.org/W2136853165","https://openalex.org/W2137226992","https://openalex.org/W2137347873","https://openalex.org/W2140435154","https://openalex.org/W2141500413","https://openalex.org/W2147026486","https://openalex.org/W2147403249","https://openalex.org/W2149199519","https://openalex.org/W2150027485","https://openalex.org/W2155311724","https://openalex.org/W2155949904","https://openalex.org/W2156682402","https://openalex.org/W2159580078","https://openalex.org/W2160815625","https://openalex.org/W2163605009","https://openalex.org/W2164985671","https://openalex.org/W2167645795","https://openalex.org/W2187089797","https://openalex.org/W2240609664","https://openalex.org/W2263730165","https://openalex.org/W2285072859","https://openalex.org/W2300445845","https://openalex.org/W2313339984","https://openalex.org/W2321270030","https://openalex.org/W2461931910","https://openalex.org/W2517673213","https://openalex.org/W2615847968","https://openalex.org/W2796856748","https://openalex.org/W2807942571","https://openalex.org/W2898897524","https://openalex.org/W2911964244","https://openalex.org/W3099006712","https://openalex.org/W3102650760","https://openalex.org/W3104092108","https://openalex.org/W3106017199","https://openalex.org/W4214683493","https://openalex.org/W4252803189","https://openalex.org/W4285719527","https://openalex.org/W4388317518"],"related_works":["https://openalex.org/W112583468","https://openalex.org/W137830373","https://openalex.org/W96119380","https://openalex.org/W4298030740","https://openalex.org/W3023706879","https://openalex.org/W3000984192","https://openalex.org/W4246773350","https://openalex.org/W2108949684","https://openalex.org/W1965976436","https://openalex.org/W2012655824"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
