{"id":"https://openalex.org/W2527569968","doi":"https://doi.org/10.1007/978-3-319-46726-9_42","title":"Automatic, Robust, and Globally Optimal Segmentation of Tubular Structures","display_name":"Automatic, Robust, and Globally Optimal Segmentation of Tubular Structures","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2527569968","doi":"https://doi.org/10.1007/978-3-319-46726-9_42","mag":"2527569968"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-319-46726-9_42","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-319-46726-9_42","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1007/978-3-319-46726-9_42","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049367577","display_name":"Simon Pezold","orcid":"https://orcid.org/0000-0002-4998-8983"},"institutions":[{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Simon Pezold","raw_affiliation_strings":["Department of Biomedical Engineering, University of Basel, Basel, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, University of Basel, Basel, Switzerland","institution_ids":["https://openalex.org/I1850255"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072426324","display_name":"Antal Horv\u00e1th","orcid":"https://orcid.org/0000-0002-3908-7049"},"institutions":[{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Antal Horv\u00e1th","raw_affiliation_strings":["Department of Biomedical Engineering, University of Basel, Basel, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, University of Basel, Basel, Switzerland","institution_ids":["https://openalex.org/I1850255"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011576904","display_name":"Ketut Fundana","orcid":"https://orcid.org/0000-0002-3546-0467"},"institutions":[{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Ketut Fundana","raw_affiliation_strings":["Department of Biomedical Engineering, University of Basel, Basel, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, University of Basel, Basel, Switzerland","institution_ids":["https://openalex.org/I1850255"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033313879","display_name":"Charidimos Tsagkas","orcid":"https://orcid.org/0000-0002-2586-6316"},"institutions":[{"id":"https://openalex.org/I2802542264","display_name":"University Hospital of Basel","ror":"https://ror.org/04k51q396","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I2802542264"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Charidimos Tsagkas","raw_affiliation_strings":["Department of Neurology, University Hospital Basel, Basel, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Neurology, University Hospital Basel, Basel, Switzerland","institution_ids":["https://openalex.org/I2802542264"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045106866","display_name":"Michaela And\u011blov\u00e1","orcid":"https://orcid.org/0000-0002-3812-7483"},"institutions":[{"id":"https://openalex.org/I2802542264","display_name":"University Hospital of Basel","ror":"https://ror.org/04k51q396","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I2802542264"]},{"id":"https://openalex.org/I4210097985","display_name":"University Hospital in Motol","ror":"https://ror.org/0125yxn03","country_code":"CZ","type":"healthcare","lineage":["https://openalex.org/I4210097985"]}],"countries":["CH","CZ"],"is_corresponding":false,"raw_author_name":"Michaela And\u011blov\u00e1","raw_affiliation_strings":["Department of Internal Medicine, University Hospital Motol, Prague, Czech Republic","Department of Neurology, University Hospital Basel, Basel, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Internal Medicine, University Hospital Motol, Prague, Czech Republic","institution_ids":["https://openalex.org/I4210097985"]},{"raw_affiliation_string":"Department of Neurology, University Hospital Basel, Basel, Switzerland","institution_ids":["https://openalex.org/I2802542264"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111944889","display_name":"Katrin Weier","orcid":null},"institutions":[{"id":"https://openalex.org/I2802542264","display_name":"University Hospital of Basel","ror":"https://ror.org/04k51q396","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I2802542264"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Katrin Weier","raw_affiliation_strings":["Department of Neurology, University Hospital Basel, Basel, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Neurology, University Hospital Basel, Basel, Switzerland","institution_ids":["https://openalex.org/I2802542264"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080608443","display_name":"Michael Amann","orcid":"https://orcid.org/0000-0001-8041-4083"},"institutions":[{"id":"https://openalex.org/I2802542264","display_name":"University Hospital of Basel","ror":"https://ror.org/04k51q396","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I2802542264"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Michael Amann","raw_affiliation_strings":["Department of Neurology, University Hospital Basel, Basel, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Neurology, University Hospital Basel, Basel, Switzerland","institution_ids":["https://openalex.org/I2802542264"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048965835","display_name":"Philippe C. Cattin","orcid":"https://orcid.org/0000-0001-8785-2713"},"institutions":[{"id":"https://openalex.org/I1850255","display_name":"University of Basel","ror":"https://ror.org/02s6k3f65","country_code":"CH","type":"education","lineage":["https://openalex.org/I1850255"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Philippe C. Cattin","raw_affiliation_strings":["Department of Biomedical Engineering, University of Basel, Basel, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, University of Basel, Basel, Switzerland","institution_ids":["https://openalex.org/I1850255"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5049367577"],"corresponding_institution_ids":["https://openalex.org/I1850255"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":{"value":5000,"currency":"EUR","value_usd":5392},"fwci":3.9189,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.94443565,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"362","last_page":"370"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T14510","display_name":"Medical Imaging and Analysis","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10227","display_name":"Acute Ischemic Stroke Management","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7621055841445923},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7442511916160583},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6869131922721863},{"id":"https://openalex.org/keywords/hessian-matrix","display_name":"Hessian matrix","score":0.5950764417648315},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5580008029937744},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.48172762989997864},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.47545549273490906},{"id":"https://openalex.org/keywords/scale-space-segmentation","display_name":"Scale-space segmentation","score":0.47110751271247864},{"id":"https://openalex.org/keywords/segmentation-based-object-categorization","display_name":"Segmentation-based object categorization","score":0.41451531648635864},{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.41164088249206543},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.20972660183906555},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.20426049828529358}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7621055841445923},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7442511916160583},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6869131922721863},{"id":"https://openalex.org/C203616005","wikidata":"https://www.wikidata.org/wiki/Q620495","display_name":"Hessian matrix","level":2,"score":0.5950764417648315},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5580008029937744},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.48172762989997864},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.47545549273490906},{"id":"https://openalex.org/C65885262","wikidata":"https://www.wikidata.org/wiki/Q7429708","display_name":"Scale-space segmentation","level":4,"score":0.47110751271247864},{"id":"https://openalex.org/C25694479","wikidata":"https://www.wikidata.org/wiki/Q7446278","display_name":"Segmentation-based object categorization","level":5,"score":0.41451531648635864},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.41164088249206543},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.20972660183906555},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.20426049828529358},{"id":"https://openalex.org/C28826006","wikidata":"https://www.wikidata.org/wiki/Q33521","display_name":"Applied mathematics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-319-46726-9_42","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-319-46726-9_42","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":{"id":"doi:10.1007/978-3-319-46726-9_42","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-319-46726-9_42","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":10,"referenced_works":["https://openalex.org/W1545791100","https://openalex.org/W1983102765","https://openalex.org/W1998275104","https://openalex.org/W2063213455","https://openalex.org/W2129534965","https://openalex.org/W2142761958","https://openalex.org/W2145803225","https://openalex.org/W2160157899","https://openalex.org/W2168005337","https://openalex.org/W2225380751"],"related_works":["https://openalex.org/W3144569342","https://openalex.org/W2945274617","https://openalex.org/W1986655823","https://openalex.org/W2185902295","https://openalex.org/W2103507220","https://openalex.org/W2055202857","https://openalex.org/W2371519352","https://openalex.org/W4205800335","https://openalex.org/W2386644571","https://openalex.org/W2372421320"],"abstract_inverted_index":{"We":[0],"present":[1],"an":[2,86],"automatic":[3],"three-dimensional":[4],"segmentation":[5,79,118,127],"approach":[6],"based":[7],"on":[8],"continuous":[9],"max":[10],"flow":[11],"that":[12,121],"targets":[13],"tubular":[14,46],"structures":[15],"in":[16,80],"medical":[17],"images.":[18],"Our":[19],"method":[20],"uses":[21],"second-order":[22],"derivative":[23],"information":[24],"provided":[25],"by":[26],"Frangi":[27],"et":[28],"al.\u2019s":[29],"vesselness":[30,38],"feature":[31],"and":[32],"exploits":[33],"it":[34],"twofold:":[35],"First,":[36],"the":[37,45,51,54,69,81,93],"response":[39],"itself":[40],"is":[41],"used":[42],"for":[43],"localizing":[44],"structure":[47],"of":[48,53,71,83,92,105],"interest.":[49],"Second,":[50],"eigenvectors":[52],"Hessian":[55],"eigendecomposition":[56],"guide":[57],"our":[58,100],"anisotropic":[59,72],"total":[60,77],"variation\u2013regularized":[61,78],"segmentation.":[62],"In":[63,85],"a":[64,110,113],"simulation":[65],"experiment,":[66],"we":[67,98,122],"demonstrate":[68],"superiority":[70],"as":[73],"compared":[74],"to":[75,103,125],"isotropic":[76],"presence":[82],"noise.":[84],"experiment":[87],"with":[88,112],"magnetic":[89],"resonance":[90],"images":[91],"human":[94,107],"cervical":[95],"spinal":[96,116],"cord,":[97],"compare":[99],"automated":[101],"segmentations":[102],"those":[104],"two":[106],"observers.":[108],"Finally,":[109],"comparison":[111],"dedicated":[114],"state-of-the-art":[115],"cord":[117],"framework":[119],"shows":[120],"achieve":[123],"comparable":[124],"superior":[126],"quality.":[128]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
